Cmon003217.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000001.1:54801970-54809424[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.15 40 6.6 0.0 3 21 151 169 150 170 0.89 2 12 1.5e-05 0.004 19.2 3.5 3 23 179 199 179 199 0.99 3 12 2.7e-08 7.4e-06 27.8 1.2 1 23 205 227 205 227 0.98 4 12 6.7e-05 0.018 17.1 2.9 1 23 233 255 233 255 0.98 5 12 0.00023 0.063 15.4 3.9 1 23 261 283 261 283 0.97 6 12 0.00015 0.04 16.0 0.3 2 23 294 315 293 315 0.97 7 12 3.2e-06 0.00086 21.3 2.4 1 23 322 344 322 344 0.99 8 12 3.2e-06 0.00088 21.3 0.5 1 23 350 372 350 372 0.98 9 12 2.2e-05 0.0059 18.7 2.5 1 23 403 425 403 425 0.98 10 12 6.9e-05 0.019 17.1 2.0 1 23 431 453 431 453 0.98 11 12 1.1e-05 0.0031 19.5 2.7 1 23 459 481 459 481 0.98 12 12 6.4e-05 0.018 17.2 1.4 3 23 489 510 487 510 0.97
Sequence Information
- Coding Sequence
- ATGAGTAACGAAAaaaattctgtgaaaataaagaCAGAACCTGAAGATATTATTAATGACGATTTCGTCTTCAAAGAATCAGAGGCCTGGTTAGATCTTCCTATTCCTTTTAAAGAAGAACTAGATTCTGCTGAGGAAAGGTCTACTGAAatttatctggatgaagtttcgGCAGCAGTTAACGCAAATATTGCACAAATTGGAGAAGATTTAGTAGAAACCAGTAACAAACACttaaatgatgttaaaattcAGATGGAAGCTCTTCAGAGAACTTTAATGGGTGAAAAACTAAGGGATCGTAGATTTAAGATTAATCCTCGAGAGAAAAAAACTAAAGAGGTGTCGAAAAATACTATAACttacaatgaaaaaactaataatgTTCATATTGATCCTGCTAATGATGAAAATTCCAGTTTAGATTGTGATGATGATGACTTGCCAAAATGCATAGTCTGTAGGAGAGTTTTCAATGATGAAGCAGGGTTAGAAGAACACATAAACAATAGAACTCCTGGAGTAAACCTTGGGTGTTGTGGATGCAATAAAGTTTTTAGAGACAATTCacaattaaatattcattttcgaaCACATACTGGTGAGAAGCCATTCGAATGTAAGGAATGTGATAAAAAGTTTTCTATTAAAGGTAATTTAAATAAACATATGAGAGTTCATACAGGAGAACGAAGGTTTGAATGTAAAACATGTAGTAAGAGATTCATACAATTTGCTCATTTAGATGATCACATAAAAACACATACAGGTGAACGGCCTTTTAACTGCGAGGAATGCCACAGTGCCTTCAAAACAAAGGCTCTTCTCAAAAAACACAAGAAAAATCATGATGAACATTTAGTGAGGAAAAGATGTGTTCGTTGTCCAATTTGTGATAAGGTAATGAAAACCAGTAAGCAACTTTATGGCCACATGAAATTACATTGCCAAGAAGATGAGCCCTTTAAATGTGAGGTTtgtggaaaaaattataagaccTTATTTTACCTCCAAAGCCACCAAAAGATGCATGAAGGTATCAAGCCATATAAATGTAGTGTTTGTGAAAAAGCATTTGTGGCTTCAAGTCAGTTGAGAAGACACGAGAATTCTCATGCAGGCGaGTTTTTGAAGTTCTTAGAAATTTTATTAAccacaaattttcttggttcTTACTTACAATTATCTCTTCCAGGTTTCAAGCCTTATCATTGTGAGATTTGCTTCAAATCTTTTGGGGTTTACCAGAACCTTAAACGCCATATACTTACCCATACTGGTGATAGACCTTTTTCCTGTGTAACATGTGGAAAATCATTCTTGACTTATGAGAATATGAATCGGCACACTCGAACTCATACAGGGGAAAAACCGTTTTCCTGTGACATCTGTGGAAGAAAATTTGCTCACAGTACAACTGTGAAGGAACATCGTAGAACTCACACAGGTGACAAACCATATGGCTGTAGTATATGTAACAAACGATTCTCATTGAATAAGGTTCTCTATAGACATATGAGGATGCGACATCCAGAACTTCATGAGACTTTTGAGAAGGTGAATGATATTCCTAAACAAGTTCGACTTCAGGTAGCTCATAATTTTGACAAGGATGAGTACCAGAAGCCAGATTACATAAATTGTTCAGACATTCTCAATGGTGAAGTCAAATTCGAAGGATCAGAAAATGAAGATGAGAAACctttaaaatatattaattccaAAGCAATGGATTCCTTGAAAAATAGCTATGTTCCTAAATATGTAGCaccagaaaatataaaaagtgAGAATGCAATAGAGGAAGCTAAAGCTCAAATTGGAAACGTTGAGGTTTGTATGGATTcagtgaaaaaagaaaatgattggGATACACAATAG
- Protein Sequence
- MSNEKNSVKIKTEPEDIINDDFVFKESEAWLDLPIPFKEELDSAEERSTEIYLDEVSAAVNANIAQIGEDLVETSNKHLNDVKIQMEALQRTLMGEKLRDRRFKINPREKKTKEVSKNTITYNEKTNNVHIDPANDENSSLDCDDDDLPKCIVCRRVFNDEAGLEEHINNRTPGVNLGCCGCNKVFRDNSQLNIHFRTHTGEKPFECKECDKKFSIKGNLNKHMRVHTGERRFECKTCSKRFIQFAHLDDHIKTHTGERPFNCEECHSAFKTKALLKKHKKNHDEHLVRKRCVRCPICDKVMKTSKQLYGHMKLHCQEDEPFKCEVCGKNYKTLFYLQSHQKMHEGIKPYKCSVCEKAFVASSQLRRHENSHAGEFLKFLEILLTTNFLGSYLQLSLPGFKPYHCEICFKSFGVYQNLKRHILTHTGDRPFSCVTCGKSFLTYENMNRHTRTHTGEKPFSCDICGRKFAHSTTVKEHRRTHTGDKPYGCSICNKRFSLNKVLYRHMRMRHPELHETFEKVNDIPKQVRLQVAHNFDKDEYQKPDYINCSDILNGEVKFEGSENEDEKPLKYINSKAMDSLKNSYVPKYVAPENIKSENAIEEAKAQIGNVEVCMDSVKKENDWDTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -