Cmon038085.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptolaemus montrouzieri
Gene Symbol
-
Assembly
GCA_013387265.2
Location
JABFTP020000144.1:91189502-91195742[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.0011 0.29 13.3 2.2 1 23 160 182 160 182 0.96
2 14 4.2e-05 0.012 17.7 0.3 3 23 253 273 251 273 0.97
3 14 5.8e-07 0.00016 23.6 5.5 2 23 280 301 279 301 0.97
4 14 6.7e-05 0.018 17.1 4.5 2 23 322 344 321 344 0.96
5 14 5.3e-05 0.014 17.4 4.8 1 23 408 430 408 430 0.97
6 14 0.0014 0.39 12.9 1.5 1 23 436 459 436 459 0.93
7 14 4.3e-06 0.0012 20.9 2.5 1 23 464 486 464 486 0.98
8 14 7.8e-07 0.00021 23.2 1.9 2 23 496 517 495 517 0.97
9 14 3.7e-08 1e-05 27.4 1.4 1 23 524 546 524 546 0.97
10 14 1.7e-05 0.0046 19.0 1.6 3 23 558 578 556 578 0.92
11 14 0.00023 0.062 15.4 4.1 1 23 584 606 584 606 0.99
12 14 7e-06 0.0019 20.2 1.8 1 23 612 634 612 634 0.96
13 14 6.3e-08 1.7e-05 26.6 0.2 1 23 640 662 640 662 0.99
14 14 0.00076 0.21 13.8 0.1 3 23 670 692 668 692 0.91

Sequence Information

Coding Sequence
ATGAGTGAGAAATCTGGGCAGGTAGATATAAACAAAATTTGTCGTTCCTGTATGGGGACGAACGAAACTATGCAAaatgttttcgaaaataaagaatatttcaaagataacAAGCTACAATTGGCTGAAATGCTTATGGCCTGTGCCTCAGTTCAGgtCACTAGTGAAGATGGTCTACCTCACTTGATGTGCCCTTCATGCGAAGGAAAATTGATAACAGCTTATGATTTCAAACAGTTAAGTGAGAAGTCAGACTCTATCTTGAGAGAACTGGCTAAACAAATACCTGAAGTTGAAGATGTTAAGGAAGAAGATATAATTATCCACCCAGATTTAAGTAATGAACTTGCAAATGATACTATAGATGATTCCGACCATGGAGCAGATAATATGGGCATGGATGATGCAAGTAGGGATTACTCAGATAGTGATTTTGAAGAATCTGAcacgaaaaaatctaaaaaattgaaaaataaacatgCATGCCTGTTCTGCGATAAAGTACTTCGTACCAAGAAGGGGCTAAAGATTCACGAGAGGAAGCATACAAGAGATAATGCAAAGGACAGCAAAAAGGAGGCTAGGGAAGGAAGAAAGACGAGATCTTCCAAGGATGCACCTGATGACGTCAAACAAGAAGTCAAGATTGAAGAAATGACTGTTGACACTCTTCTGGAGACGGAGATAAAATTACAATCAAGCGATGAGGAACATGGGGCTAGTGGaacagaaaaagagaaaaaaggtGGTCTTGActgcaaaatttgtttgaaaacaCTGACCACTCCTGCTGGATTGAAGATACACATGCGCAAGCATACTGGCTCAGATTTGTCTGTTTGTGAGGTATGTAACAAATGCTTCACCAAACCAAGTCATTTGAAACGCCATCAACAAACTCATGGTATAGCAACAGATGCTCCAACTACTACAGGTTCAACACCAAAGGAAAAGAAGttgCTTCAGTGTGAATTTTGTGATCGAACGTTTAAGTACCGTAAAAGTTTCAACCATCACATGCAGAGTGAACATGGAGTTGACGGCGACGATAGTGACGTTTGCCTCTCTACAATCGCCGAGAAGGTGAAGAAAGAGAAAGAAGGGAAGAATTCTGGTGGTGACGCAGAAAATGtggAAACTGATGACGAAAACAAACTGGACAGGGATGATAAAGACGAGATCTTTTCGTCCCCACCGGACAAGAAACGACCTGTTAAGGTTCATACTTGTCACGTGTGCCAGGTGGAGTTCACCCGAGCCAATCACCTGACGCGACACATGATCCTTCATCGTGCAGTCTTGATTCACAAGTGTACACAATGCGACAGTGCGTACGCTACCGAGGAGCATCTTAAGAAACATGTCGAAGAAGGTCATGTAAATAAGCCCTATGCTTGCACGATGTGTAATAAGCAGTTTAGCAGAGGAGAACATCTGATAAGGCACTTGAAGACTCATCAGAATTCGAACGGAGAAGAGGATTTGAAGTGCGCCATTTGCGAGAAGACTTTCACGAGATCTGACCATTTAGCTAGGCATACTAAGGTGCATCTTTTGCAAGACAAAAGGCACGTCTGCTCCGACTGCGGAAAGGCGTTTAATAGGCTGGACAACCTGAAAACGCATCAGAGAATACATACGGGAATAAAAGACCCCACCAAGTTACATCTCTGCATCTACTGCGGAAAGGAATTCAACAATTCGAGTAATATgATTGTTCACATGAGGAGGCACACCGGCGAGCGTCCTTACAAGTGCGCTCAATGCGGCAAAGGATTTCCAAGATCTCACGATTTGAAATGCCACGAACGAACTCATTCCGGTGAAAAACCGTACCTCTGCACGTTATGTGGAAAGTCGTTCAATAAGAGCAACAAATTGCTGCGGCACACACGAGTCCACACAGGTGAACGACCCTACGTGTGCAGCATCTGCGGCCGCGCCTTCACCCAATCGAACGATCTCGCCCTGCACATGCGCAGGCATACGGGTGCCCGTCCCTACGGTTGTGGCATGTGTCCCGCCCGTTTCATCCAGTCTGGTCAGCTCAAGGCGCATCGCAGATCGACCGGACATTGGGTTGAAACTCCGCCCGATCTGAAGGGAGGTCACAGGGTCGAACCTGTCACCCCGTTGCTGGATCCCATTCCTGTCAGATTCAGATCCAAGCCTAAGATGGAAGATGAGAAGCCGCCAGTGCAGATGatcaatcaaatcaataatcCTCCGTCCTCCCAACCGGAGGTGGTGAACAACTATCAGATGGTGCAAGTTCCGGGTCCTCCCAAGCTAATTGGTCTGGGTCTAAGCGCCGAAACATTGGCGGCCATGGCTCCTCGTCCGGAAGATTCGAATCCCAACAGTATGCCAGCCGATCTCAAACTTAAAATCGAGGGCACGGAGAAGGAAAATCAGACGATGGCTGAGGCCTCATTCCATCACGACGCTTACGCGTTACAGAAAGGGTATTTCCAGAATTACATGTAG
Protein Sequence
MSEKSGQVDINKICRSCMGTNETMQNVFENKEYFKDNKLQLAEMLMACASVQVTSEDGLPHLMCPSCEGKLITAYDFKQLSEKSDSILRELAKQIPEVEDVKEEDIIIHPDLSNELANDTIDDSDHGADNMGMDDASRDYSDSDFEESDTKKSKKLKNKHACLFCDKVLRTKKGLKIHERKHTRDNAKDSKKEAREGRKTRSSKDAPDDVKQEVKIEEMTVDTLLETEIKLQSSDEEHGASGTEKEKKGGLDCKICLKTLTTPAGLKIHMRKHTGSDLSVCEVCNKCFTKPSHLKRHQQTHGIATDAPTTTGSTPKEKKLLQCEFCDRTFKYRKSFNHHMQSEHGVDGDDSDVCLSTIAEKVKKEKEGKNSGGDAENVETDDENKLDRDDKDEIFSSPPDKKRPVKVHTCHVCQVEFTRANHLTRHMILHRAVLIHKCTQCDSAYATEEHLKKHVEEGHVNKPYACTMCNKQFSRGEHLIRHLKTHQNSNGEEDLKCAICEKTFTRSDHLARHTKVHLLQDKRHVCSDCGKAFNRLDNLKTHQRIHTGIKDPTKLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCAQCGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCSICGRAFTQSNDLALHMRRHTGARPYGCGMCPARFIQSGQLKAHRRSTGHWVETPPDLKGGHRVEPVTPLLDPIPVRFRSKPKMEDEKPPVQMINQINNPPSSQPEVVNNYQMVQVPGPPKLIGLGLSAETLAAMAPRPEDSNPNSMPADLKLKIEGTEKENQTMAEASFHHDAYALQKGYFQNYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00416967;
90% Identity
-
80% Identity
-