Basic Information

Gene Symbol
rcor2
Assembly
GCA_013387265.2
Location
JABFTP020000001.1:71175115-71190931[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-10 1.7e-06 29.7 0.0 3 46 131 174 129 174 0.97
2 3 1.3 3.8e+03 -0.2 0.2 36 44 272 280 261 281 0.90
3 3 3.1e-14 9.2e-11 43.4 0.0 3 46 379 422 378 422 0.98

Sequence Information

Coding Sequence
atggTGTTAGCTGAAAAAAATAGTGATAACATAAGAAACGGTCGCAGGAGCCGAGGACCGAGTCCCAATGGACACGCACAAGCGGATTCCACAAGCGAAGATGAGAGTACAGTTCCTGTAGATAAGATTCGGGTTGGAAGAGACTATCAAGCCATATGTCCAGAACTTAGACCAGAAAACCAAAGAAAACCTGAGCTTTTAGCAGACAGAGCTTTATTAGTTTGGTCTCCTACAGATACAATTGCAGATAATAAACttGAGGACTACATAATCTTGGCTAAAGATAAGTATGGTTACAATGGTGAACAGGCTCTTGGGATGCTTTTCTGGCACAAACATGATTTGGATAGGGCTGTTTTGGATCTTGCCAACTTTACTCCTTTCCCGGATGAGTGGTCAGTTGAGGATAAAGTGCTGTTTGAACAGGCCTTCCAATTTCATGGGAAAAGTTTCCATAGGATTAAGCAAATGCTTCCGGACAAGAGCATCGCCAGTCTTGTAAAGTACTACTACAGCTGGAAGAAGACAAGAAGTCGCAGTAGTCTGATGGACAAACAAGCCAGAAAActacaaaattcaaaagaagaaGGAGCTGCATCTGAAGCAGGTTCTGAAGGAGGTTCTAATGAAGAATCAGATCATGAAGAAAAGAAATGGACAATTCATCGTGGTATTCGGCGTAAAAGTGATTCGCCGAATCGTTCCGGGCCATCTGCCGATGAAAATCAATCTCAGGGTGAGGGTGGCGGACAATGTACGAATTGCGGCATCTTCTGTACAATTATGCAACATACCCCCAGAGGATTCCTCTGCAATTCCTGCTATCAGCATTGGAGACGGACGGGAATGCAGCGTCCCACCTCTGGTCCTACCGGCGGTAAGAGGGGTACCCCTTTGGGGGCCAGGCACAAGCGCAAACCCCCTAGGGGCATGTACATCAACCATGATGATTTGGCTGGAATGGCTTCTGGCCAGGCTGGGGTTCAGATGCTTAAGGCGATGGATAGGGAGTTAGACTCGCTTCAGAGACAAataCAGCAGAATAAACAACAAATCAGCTCATTGAAAAGAAAGCACTCAGATACCTTAGAAGAGCTTAGACCAGGCAATGATGGAAACACAAGAATAAATGCTAGGTGGACAAACGAGGAACTCCTATTGGCTGTTCAGGGCGTTCGCAAGTACGGTAAAGATTTCAAGAGTATTGCAGAAGTATTGGGAAATAAGACGGAGCATCACGTTCGCACTTTCTTTGTGAATTACCGTAAAAGGTATAACTTAGATAATGTCCTAAAAGACTGGGAGAAAGACAATGGGCCCTTACCTGAAAGTGAACTCAAAATGGATATTGAAGAAgtaaataatgataatgatgtaATTTGCATATCACCTACACCTAATGGTAGCAACAGCGGCAAAAAAGATGTGAAAAACGGTAAAGTTGCGCCTGTTGGAGCCAAATGA
Protein Sequence
MVLAEKNSDNIRNGRRSRGPSPNGHAQADSTSEDESTVPVDKIRVGRDYQAICPELRPENQRKPELLADRALLVWSPTDTIADNKLEDYIILAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIKQMLPDKSIASLVKYYYSWKKTRSRSSLMDKQARKLQNSKEEGAASEAGSEGGSNEESDHEEKKWTIHRGIRRKSDSPNRSGPSADENQSQGEGGGQCTNCGIFCTIMQHTPRGFLCNSCYQHWRRTGMQRPTSGPTGGKRGTPLGARHKRKPPRGMYINHDDLAGMASGQAGVQMLKAMDRELDSLQRQIQQNKQQISSLKRKHSDTLEELRPGNDGNTRINARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRTFFVNYRKRYNLDNVLKDWEKDNGPLPESELKMDIEEVNNDNDVICISPTPNGSNSGKKDVKNGKVAPVGAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00348798;
90% Identity
-
80% Identity
-