Basic Information

Gene Symbol
CDC5L
Assembly
GCA_013387265.2
Location
JABFTP020000103.1:51323655-51324650[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-17 8.9e-14 53.0 1.5 2 46 9 54 8 54 0.97
2 2 2.2e-11 6.5e-08 34.2 0.1 1 43 60 101 60 104 0.93

Sequence Information

Coding Sequence
ATGCCAAGGGTTATGATTAAAGGAGGTGTTTGGAGAAACACCGAGGATGAAATCCTCAAAGCGGCTGTTATGAAATATGGGAAAAATCAGTGGTCTCGAATAGCTTCTCTTCTACATCGTAAATCAGCTAAGCAGTGTAAAGCCAGATGGTTTGAATGGCTAGATCCTAGTATAAAGAAAACCGAATGGTCTAGAGTTGAAGATGAAAAACTATTGCATCTAGCGAAATTGATGCCAACTCAGTGGCGAACTATAGCACCTATAATCGGAAGAACAGCAGCACAATGCTTAGAaagatatgaatatattttGGATCAAGCTCAGAGAAAAGAAGAAGGAGAATATGCAACTGATGACCCACGTAAACTCAAACCTGGAGAAATTGATCCAAATCCCGAAACAAAACCAGCTAGACCAGATCCAAAGGATATGGATGAAGATGagCTTGAGATGCTTTCTGAGGCCAGAGCCAGATTAGCCAATACCCAAGGTAAAAAAGCAAAACGTAAAGCACGGGAGAAACAACTGGAAGAGGCTCGAAGATTAGCTGCTTTACAAAAGAAACGAGAACTGAGGGCAGCTGGTATTGATGTCTTTTCTAGACGTAAGAAAAAGAAGGGTATTGATTATAATGCTGAAATTCCATTTGAGAAAACTCCTGCTATTGGATTTTATGATACGACACATGAAAATATAGATCCAGTCGCTCCAGATTTTGGCAGTATGAATCAGCAAAATATTGATGGTGAATTGAGGAGTGAAATTGAAGAGGTATGTATAATATTTTGGTAA
Protein Sequence
MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSRVEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYILDQAQRKEEGEYATDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKKRELRAAGIDVFSRRKKKKGIDYNAEIPFEKTPAIGFYDTTHENIDPVAPDFGSMNQQNIDGELRSEIEEVCIIFW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-