Basic Information

Gene Symbol
mybL
Assembly
GCA_013387265.2
Location
JABFTP020000165.1:50100686-50111309[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.00063 1.9 10.3 0.0 22 45 131 159 114 160 0.75
2 6 1.4e-08 4.1e-05 25.3 0.3 1 44 166 211 166 213 0.94
3 6 5.3e-09 1.6e-05 26.6 0.0 1 44 219 266 219 268 0.94
4 6 9.5e-09 2.9e-05 25.8 0.0 2 46 276 320 275 320 0.96
5 6 3.7e-05 0.11 14.3 0.0 1 45 326 370 326 371 0.91
6 6 8.2 2.5e+04 -2.8 0.0 18 32 424 441 423 443 0.78

Sequence Information

Coding Sequence
ATGGACATCGAGAGTGAAGATGAATCCGAAAAAACATTCACAAATTTAACGAATGTACCTATTGAACCTTCGctTAACTATCAACTGCAGTTTGAACAATTTGTAGTAGCCGAAAAAAGTGACGATGAAAGTGATAGCGAAGATcAGGGAGATAGTGATCAATCATCAAATGATGATGAACAGGAAGAAAGAGAAATGGAGGAATCTTTCTCTGCTGAAACTGAAGATCTTCTTCGTGACCTAGATATTTCTACATCATTCCAAGAATGCACTCTAAAATCTGAGGAAGTTACAATAATAGAGAATTGTCACAATACAGAATTAAAAAagACAGAACAGAATGAAGTTGAACAATTAGGTTCAGAAGATGTGCCACCACTAGGTTCTGACGATTATATCGACTGGGAGCATATCGCATCAGAATACTTAAATGgTAAACATACAGCTCTTGAATGCAGAGCTTTCTGGCACATCTATCTTCATCCagaaataaacaaatcaaaTTGGATAGAGGAGGAAAACACAAAGATTAAGGAATTAGCTAAGAAGTACAATCAGCAAGATTGGGATCGAATAGCATTAGAACTTAACACTAACCGTAGCGGTTTCTCAGTTTGTCTTCACTATCTGAGTGCATTATGTGAACAGGGTAGTAAATTGAGATTCACCAAAGAAGAAGATGATTTAATACTATATCATGTGGAAAAGATGAGAGTTGGTTCATACATTCCGTGGAATGCTATTGAATCATACTTTCCCAATCGAATTAGGAACCAGTTAGTACATCGGTAtaagtattttctgaaatataacaATCATGAACAAGGAGTATTCAGTGATGCTGAAGAtattttaatatcaattttggtTGATCGATatggaaataattattccaAATTCGCTCATCATCTACCTCACAGATCATATATGCAAATTAAGAATAGGTATGATAATCACTTGAGAATAAGCGCCATAAAAGGAACTTTCACAGTAGAAGAAGATGAGAAGTTattaaaatttatgtcaagtaaaCGATATATGCGTCTGGGTAGCCTTTGTAATGAGATGAATCGCACAAGACCCCAATTACGGCAAAGATATAAAacattaaaacaattttttgacaAAAATCCAGGTGCTACTATATCAAATGCTCCTAGAAGGACGGTTCGAAATGATGAATCAGCTAGAAGATATGAATTCGTGAAGTATATGGCTGatctatataaatatgaatatgatgTTCCAACTCTTCAAGATATAGAAAAAAGACTAGGGGTAACACCTCCCAAAGTTATACAAGAAAAAATGGGTATCATATCTCGAAAGAATATGAAAAGGGCAAGAAACAATCCTACATACAATGTAGATTTGCTTCTAACAAATTTCTTTAGTCACTCCTACAAACTCAAACAAAAACCTATTGACACCACAATTCATAAAATACAAGATGCTACAGAAACAGTATTCGATATATTAATGAAGTGGAAAGTTAATCTTGAAATTCCTGAAGATCTACAAAAGGCAACAACTTAG
Protein Sequence
MDIESEDESEKTFTNLTNVPIEPSLNYQLQFEQFVVAEKSDDESDSEDQGDSDQSSNDDEQEEREMEESFSAETEDLLRDLDISTSFQECTLKSEEVTIIENCHNTELKKTEQNEVEQLGSEDVPPLGSDDYIDWEHIASEYLNGKHTALECRAFWHIYLHPEINKSNWIEEENTKIKELAKKYNQQDWDRIALELNTNRSGFSVCLHYLSALCEQGSKLRFTKEEDDLILYHVEKMRVGSYIPWNAIESYFPNRIRNQLVHRYKYFLKYNNHEQGVFSDAEDILISILVDRYGNNYSKFAHHLPHRSYMQIKNRYDNHLRISAIKGTFTVEEDEKLLKFMSSKRYMRLGSLCNEMNRTRPQLRQRYKTLKQFFDKNPGATISNAPRRTVRNDESARRYEFVKYMADLYKYEYDVPTLQDIEKRLGVTPPKVIQEKMGIISRKNMKRARNNPTYNVDLLLTNFFSHSYKLKQKPIDTTIHKIQDATETVFDILMKWKVNLEIPEDLQKATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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