Cmon052123.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000185.1:142169835-142171645[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-10 4e-08 34.5 0.0 2 42 19 59 18 62 0.91
Sequence Information
- Coding Sequence
- atgggcaGAACATATACGCGAAAGCTAGGCAGCAGaacttacaacaatttttctgatgaacaactagaaaatgccCTTCGAGACGTTACAAATAATACACTTTCTATGCGCCAAGCAGCTCGCACTTACAATGTTTCTTATGGTACCCTTAACAACAGATTTCATGGGCGCAGATTCAAAAAATCGGCGGGCAGACAATACTATCAAACATTGAAGAGgagccattttgacgaatatacTGAAATGCGCAGACTGGGGATTTCCTTGTCTCCACAAGATCTAAGAATGTTCGTGAAAAGTTATTTAGATAAAAGTGGTAGAAACatttacaaattcaacaataatttGCCTGGTAAAGACTGGGTCAACAGTTTCCTTAAGAGGCACCAACATGTCGCTGGAAAAAGATTATCGTCCAACATTAGTGCGAAACGGAGTCAGGTGACTCCTTCCATACTAAGAGACTATTTCAACAACTTGCGAGTCACCCTGGATGGTGTTCCCCCGGAGAATGTGTTTAACTACGATGAATCAAATGTTACAGATGATCCAGGGAAAAAGTTGCGCATTTATCGTAGAGGTACAAAATACCCAGAAAAAGTTTGCAaccattcaaaatcatcaacgacCTTAATGATGTGTGGATCAGCATCAGGCACTCTACTGCCGCCCTATGTAATATACAAGGCCGAAAACTTGTGGAATACATGGACTGAGAATGCTCTTAAGGGTAAACCATGCTGTGATAAGATATGCTGCTCGCAAGGTACTCGATTCAACCGAACTTCGCACGGTTGGATAGATATGCCCACATTTCACGAATGGTTTTCCACAGTTTTTCTACCACACGCTAAAAGGTTAAATGGACGAAAAGTCCTTTTGGGAGATAATTTGGCCTCACACTTTAATCCAGAAGTACTGAGAacgtgtgaagaaaatgacatttcttttgtttgtctccCTCCCAACTGCACCCATATCTGCCAGCCTTTGGATGTCGCTTTTTTTCGTCCATTCAAAGAAAGTTGGAGGAAAACACTATCAGCCTGGAAagttagaaattccaaaactTCTGGGATTCCTAAGAACGAATTTCCTCTTCTACTGAAACAGTGCATTATTAACATGGACGAAGTTCTGCCTAAGGACAACTCTAAAGAAAGAAGCGGTGTTACACGCAATCTCATTTCTGGATTTGCAGCTTGCGGTCTTGTGCCTTTCAATCCTGATCGAGTTCTTCAAAATTACCAGAGACAGCGAAAGAAGCTTTTACATGTTGAACCAGGAAAATCTGTTGCTGGTCCGAGTACTCAACTTTCGTCCAGCGAggaggaaaatgagaatatacaaTTAGATGATAATTCAGAAGACGATGAATCTATAGATGAACCGACGGCAGACCCTATAGAATATTTCGAGCCAACTTTAGACAATATTATCTTCGGAAAGTTCGTCTTAGTTAAATTTCTATCtggttcaagaaagaaaacagaatttcgcTATGTGTGCCTCATTCAGAAAGTTTTAAAAGATAACGTCTTTGAAGTTGTCGGTTTAAAGTCTGCTCATTCGCGAAGTGTATTTAAACTCGTCGAGAATGATGTTTCAACAGTGCAAATTGGTGATATTGTGGCACTTTTACCAGACCCTAAGTGTGTTAAAATATCAGACagaataataagatatcattttccaaatgacattaatatcaaggaatgctaa
- Protein Sequence
- MGRTYTRKLGSRTYNNFSDEQLENALRDVTNNTLSMRQAARTYNVSYGTLNNRFHGRRFKKSAGRQYYQTLKRSHFDEYTEMRRLGISLSPQDLRMFVKSYLDKSGRNIYKFNNNLPGKDWVNSFLKRHQHVAGKRLSSNISAKRSQVTPSILRDYFNNLRVTLDGVPPENVFNYDESNVTDDPGKKLRIYRRGTKYPEKVCNHSKSSTTLMMCGSASGTLLPPYVIYKAENLWNTWTENALKGKPCCDKICCSQGTRFNRTSHGWIDMPTFHEWFSTVFLPHAKRLNGRKVLLGDNLASHFNPEVLRTCEENDISFVCLPPNCTHICQPLDVAFFRPFKESWRKTLSAWKVRNSKTSGIPKNEFPLLLKQCIINMDEVLPKDNSKERSGVTRNLISGFAACGLVPFNPDRVLQNYQRQRKKLLHVEPGKSVAGPSTQLSSSEEENENIQLDDNSEDDESIDEPTADPIEYFEPTLDNIIFGKFVLVKFLSGSRKKTEFRYVCLIQKVLKDNVFEVVGLKSAHSRSVFKLVENDVSTVQIGDIVALLPDPKCVKISDRIIRYHFPNDINIKEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394313;
- 90% Identity
- iTF_00394316;
- 80% Identity
- -