Cmon034410.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000144.1:22775353-22775820[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-10 2.7e-08 35.1 0.0 3 37 17 52 15 57 0.88
Sequence Information
- Coding Sequence
- atgccaaaattcaaagaacgaaaaacaactagaggaagttgggatgaaaatactatgaaaagagtAATCCGAAGTGTTCAGGAGAGAAATCTATCTATaagaagagctgctgaacggtatggtgttccaagaagtacgctccaggataaaataaaagctataGGTAATGGAGAAGAAACAGAATTCAAGCCGAAATTGGGGAGGTTGGAGCACACATTTTCCAACGATCAAGCTCTGCAACTTCATGACCATGTTATCGATCTAGATAATCGGCTCTTGCCACTTACGAAAGCGGAATTTTCAAAACTGGCTTTCCAATTTGCAGAGCAACTAAAAATTCCTCATAGATTCAACAAGGGAAAAAAAGGCCGTAAAAGATTTTTACTACAGTTTTTCGGAAAAATACCCAGATACTGCTCTCAGAACTCCAGACTCAACCAGTATCGCGAGAGTCGTTGGTTTCAATAA
- Protein Sequence
- MPKFKERKTTRGSWDENTMKRVIRSVQERNLSIRRAAERYGVPRSTLQDKIKAIGNGEETEFKPKLGRLEHTFSNDQALQLHDHVIDLDNRLLPLTKAEFSKLAFQFAEQLKIPHRFNKGKKGRKRFLLQFFGKIPRYCSQNSRLNQYRESRWFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394267; iTF_00394242; iTF_00394280; iTF_00394384; iTF_00394208;
- 90% Identity
- -
- 80% Identity
- -