Cmon003873.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000001.1:66820539-66820961[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-10 4.3e-08 34.4 0.0 2 37 14 48 13 51 0.93 2 2 2.3 3.8e+02 2.6 0.0 28 35 53 60 52 67 0.89
Sequence Information
- Coding Sequence
- ATGCCACGAAAGAATAAAGGTATTAGGATCCAATGGCTGGAACAAAACATGACTAGGGCTATAGAAGCCGTCAATAATGGTATGTCTGCCAACAAAAGTAGTGAAACATTTAATGTTCCAAGGCGCACACTGAGGCGTTATTTGGTCACAAATAAAATTGCTAAATCGACACTGTGGCGGAAGCCAATCCTAACGAAGAATCAGGAATTGGAACTTGTTCAGAGGTTCGTACGCCTCTCTGAAATCGGTTACCGCCTTACCCCTAAGGTACTCCGTTCGTGTGTGTACAAATTTACTGAAATCAATAGCATCAAAAATCCTTTTATGAATGAAAACGAAATGGCTGGACGATATTGGCTGAAGGGGTTTCTAGAGAGAAATCCTCAAATTCGTCCTCGAAAATCTCAAAACTCAGTCTGTTAA
- Protein Sequence
- MPRKNKGIRIQWLEQNMTRAIEAVNNGMSANKSSETFNVPRRTLRRYLVTNKIAKSTLWRKPILTKNQELELVQRFVRLSEIGYRLTPKVLRSCVYKFTEINSIKNPFMNENEMAGRYWLKGFLERNPQIRPRKSQNSVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394378;
- 90% Identity
- -
- 80% Identity
- -