Cmon019085.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- -
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000062.1:60418293-60419087[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-11 1.5e-08 35.9 0.0 2 37 16 52 15 57 0.91 2 2 2.5e-05 0.0042 18.4 0.0 17 36 69 89 63 94 0.87
Sequence Information
- Coding Sequence
- atgccaaaattcaaagaaagaaaaacaactaaaggaagttgggatgaaaatactatgaaaagagcGAACCAGAGTGTTCAGGAGAGAAATTTATCTATAAGAAGAGCTTCTGAACGGTATGGTGTTCCAAGAAGTACGCTCCAGGATAAAATAAAAGCTATTGGTAATGGAGAAGACACAGCCGGAATTGGGGAGGAGAGAAATCTATCTATAGGAAGAGCTACTGAACGGTATGGTGTTCCAAGAAGTACGTTCcaggataaaataaaagttatagGTAATGGAGAAGAAACAGCCGAAATTAGAGAGGTTGGAGCACACATCTTCTAA
- Protein Sequence
- MPKFKERKTTKGSWDENTMKRANQSVQERNLSIRRASERYGVPRSTLQDKIKAIGNGEDTAGIGEERNLSIGRATERYGVPRSTFQDKIKVIGNGEETAEIREVGAHIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -