Cmon016404.1
Basic Information
- Insect
- Cryptolaemus montrouzieri
- Gene Symbol
- lov
- Assembly
- GCA_013387265.2
- Location
- JABFTP020000062.1:18497280-18499328[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-17 8.3e-15 55.9 0.0 1 44 386 429 386 430 0.96
Sequence Information
- Coding Sequence
- ATGTCTCAATCCCACTACAGCCTCAGATGGAACAACCATCAAACTCACATTTTAGCAGCTTTCGATGCCCTCCTTCAAGCTGAAACTCTTGTAGACGTCACGCTAGTGTGCGCAGAAACATCAGTTCGAGCTCATAAAGTAGTTCTAAGCGCATGCTCGCcgttttttcaaagaatattcTCTGAGAATCCTTGCAAGCACCCCGTCATCGTCTTGAAGGATTTCTCAGGATGGGAAGTTCAAGCTATAGTTGATTTTATGTACAAAGGAGAAATTAGCGTAATACAAGCTCAGCTGCAAAGTTTGATCAAAGCTGCAGAGAGCCTGCAAGTCAGGGGGTTAGCGAATCAAGATCCGTTCGGAGTGGATAAAGAGGGAGCAAGTATAACGAATCGAACGCCACCAGCGGAGAGTCCGAATGAATACGATAGGAATTACTACACGCATAATAGGTATCCAACGCCAGGAACTACAGCAAGATCTTCTGCTGATAGGCTGTCTCCTGGAAGATTAGgaTCCCCATTTTCTCCTTCGTCTGCTTCAAATTATGAACCATCTGTCAAATTGCCACATATGTCAAGACTTTCCTTCCCTGACTCCCTTCTCCCTAGACAAGACTGCCAATCGCCGATTCCGCGACGGAAACAAGCAAGGCCTAGAAGACGTTCAGGTGAGATTTGCGGCGTTCAAGATTTATCCACTAGTGTGCCCAAGCCTTCTCCAAACGAAGAAATGGCGGAGAACCTCTGCATAAAAAAGACGGATGATAAACCCAAGAATGAAGAGAGAGGCAAAGTGACTCCTGATTTGTCCAGAACACCTGAGTTAGATCTGAGTACTAAAGAGTTCAGAACATCGCCTGCTTGCTTACCTCCACCTTCAATTAGTATGAAACAGGAGATGGAAAATCATTCGCCACTTTCATTTCCGCCCATGCCCTCAGTTTCCGCCTTGGCCATGACGCCCCCACATAGCAAATtttttggacTAGATTCTCCTCTGGGACTCTTTCCTGCTGGACTAGATAGCTGTAGGAATCCATTGTTTGACATTCCCGACCACAGAGCACCGGAGTCGCAGATGTTTGCGAAAAAGAAAATGGGAAGACCCAAGGGCCAACATTCTGCCCCAAGAGGAGGTCCTCCCCGATCCTGGACCAACGCTGAGTTAACAGAAGCTCTACAGCATGTATGGAATAAGAAGATGACAACGAGTCAAGCATCTAGAATCTTTGGAATACCTTACAACTCTCTGCTTATGTATGTAAGAGGCAAGTATGGAAAAAGTCTAAAATTGGAACAGCTCCGTAAGGATTGCATAGGAGGGCCAAATCCACCTGTAGATCTTATGTCTATGGGACAAAGTAACAATAACAACAACCCATGTAAAACTGATAGGGAGAATGAACCAATTCAGCCCAATACCAGGCCGCCTAGTACAGAAGAACAACCACCTCCACCACAACATTTCATGAATCCATTTATGCACAATTTCTAtcaagattttggaaatttcccAATACCCGTTAGTATGATCCACCTTTTACCACAAAGTGAAAAGAGTAGGGATCATTATGGAAACCCACCACAAAATGAAGTGATGGATTGTAAAAAAGAAATTATGGAAGAGGATCAAGAAATGTTCAAACCTCCAACGCTATCTGTTGACGATCGGCGGGAGTTAGTGCAACACAACGGACAGGATTAA
- Protein Sequence
- MSQSHYSLRWNNHQTHILAAFDALLQAETLVDVTLVCAETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFSGWEVQAIVDFMYKGEISVIQAQLQSLIKAAESLQVRGLANQDPFGVDKEGASITNRTPPAESPNEYDRNYYTHNRYPTPGTTARSSADRLSPGRLGSPFSPSSASNYEPSVKLPHMSRLSFPDSLLPRQDCQSPIPRRKQARPRRRSGEICGVQDLSTSVPKPSPNEEMAENLCIKKTDDKPKNEERGKVTPDLSRTPELDLSTKEFRTSPACLPPPSISMKQEMENHSPLSFPPMPSVSALAMTPPHSKFFGLDSPLGLFPAGLDSCRNPLFDIPDHRAPESQMFAKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPNPPVDLMSMGQSNNNNNPCKTDRENEPIQPNTRPPSTEEQPPPPQHFMNPFMHNFYQDFGNFPIPVSMIHLLPQSEKSRDHYGNPPQNEVMDCKKEIMEEDQEMFKPPTLSVDDRRELVQHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00394667; iTF_00416888; iTF_00415797;
- 90% Identity
- iTF_00394667;
- 80% Identity
- iTF_00394667;