Basic Information

Gene Symbol
retn
Assembly
GCA_013387265.2
Location
JABFTP020000185.1:59618872-59622207[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-12 8.7e-09 37.4 0.0 29 80 4 53 1 56 0.90

Sequence Information

Coding Sequence
ATGGCAAAATCGGTTCTAGACTTATATGAACTCTATAACTTAGTGATAGCAAGAGGTGGATTAGTGGATGtaataaataagaaattatGGCAGGAAATCATCAAAGGATTACACCTACCATCTTCAATTACGTCGGCTGCTTTTACCCTAAGGACGCACATGGGAAAACGAAAACATCGTAGTAGTTCGCCGGACAGTAATGATAGGATGTCCAAGAAGAAACTATTGAAGAGATTAGACCGATTGGAGAGGAAATTAGATAAGAAACGTAAACAGAAGTTAAGTTCTTCATCTCCAACGGCTTCGGACGACGTCCATGATCGAAAACGATCTTGA
Protein Sequence
MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHMGKRKHRSSSPDSNDRMSKKKLLKRLDRLERKLDKKRKQKLSSSSPTASDDVHDRKRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-