Cpra008358.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- nfxl1
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000197.1:494436-497240[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.5e+04 -5.0 1.9 15 19 126 130 126 130 0.85 2 18 1.6 2e+04 -3.8 0.3 4 10 161 167 161 167 0.78 3 18 8.8e-08 0.0011 19.4 14.6 1 18 175 191 175 192 0.94 4 18 0.00048 6 7.5 16.8 3 19 230 247 218 247 0.87 5 18 0.67 8.3e+03 -2.6 1.2 9 13 253 257 251 258 0.76 6 18 2.7e-07 0.0034 17.8 13.5 1 19 282 301 282 301 0.98 7 18 0.00016 1.9 9.0 9.2 1 18 337 354 337 355 0.97 8 18 0.033 4.2e+02 1.6 12.7 1 12 389 400 389 401 0.95 9 18 0.28 3.5e+03 -1.4 0.3 6 10 410 414 409 416 0.91 10 18 9.3e-08 0.0012 19.3 12.8 1 18 420 437 414 438 0.85 11 18 0.00019 2.3 8.8 8.2 9 19 486 496 484 496 0.90 12 18 0.0024 30 5.2 6.0 3 12 507 516 499 516 0.78 13 18 1.9 2.4e+04 -4.1 8.5 14 19 547 552 547 552 0.94 14 18 3e-05 0.38 11.3 7.1 1 12 588 599 588 599 0.96 15 18 0.57 7.2e+03 -2.4 1.4 6 10 614 618 613 618 0.88 16 18 0.00021 2.6 8.6 14.1 1 19 626 643 626 643 0.94 17 18 2 2.5e+04 -6.6 3.4 9 13 649 653 649 653 0.71 18 18 5.9e-05 0.74 10.4 12.3 1 16 688 702 688 707 0.93
Sequence Information
- Coding Sequence
- ATGCAGAGATTTAAGCAGATACAGGAGAGGGACCAAGTGTCGATCGAGAGGTACCTCGAGGTGAACAATCTGATAGATGAGTCTAGTGAAGATGAGGACGAAGAAGAGAAGGATGAGATGCGGGAGAACGTGTCGAAAGTTCTCTCATGTTACAAAGGCGAAAAAGCCGACACGGAAAGGGTCCTGTCTTATTTGACCAATACTTTCCAATCCGGCGGCGCTGTTTGCTTAATCTGTATCTCAACTATAAAGAAGGTGGATCCGATATGGAACTGCAGCAAGTGTTACGCATTCTTGCATATGACTTGTATATTACCTTGGATCCGGGACAGTTTGTCGTATAAGCATCAACACGGTATTCAGCCACTGTGGGGATGTCCGAAATGTCGTAATGACTATAAGGAGGAGGATATTCCGAAGGCATACAAATGCTTTTGCGGAAAGGTAGATGACCCACCTTATCAACCATGGTGCATACCACATTCTTGTGGATACATCTGTGCGAAGACGCTAAACCCCCCGTGCAGTCATAAATGCACGCTACTTTGTCACCCGGGCCCTTGTCCCCCATGCGCAAAAGTCGTCAAAGCGGATTGCTACTGTGGAAAGCAAATCGGCGCACAGCGTCGTTGCAACAACAGAGGATGGAGCTGTGGCAAAGTGTGCGGCAAAAAGTTCAGTTACTGCGATCACACCTGCCAGGAGCCCTGTCACGAAGAGAAGGAATGCCCCCCCTGTCCAGAAACAGCCAATGTCCCCTGTCACTGTGGCCAGAAAGAAGAGTGGAAGTACTGCAAAGAGGTGAATTGGTCCTGTGACACCCCCTGTGCCAGGCCACTATCCTGTGGCGTTCACACGTGTGACAAAACCTGCCATAAGGCAGGCGACTGCGGGCAATGTCCTCAAGAAATCGACAGAACCTGCCCATGTGGCAAGAAGCGGTACCCTGGCTCGTGCAAAGACAAACGTCCGCCCACCTGTGGCAACACCTGTGGCAAGCCCCTCGACTGTGGCTCGCATTTCTGCAGCATGCGATGCCATCCCGACCGATGTGGCCAGTGTCTAGAAGTCGTGTCCAAAGTCTGCCGGTGCGGTTCTCTTCAGAAAGAATACGCCTGCAGCAAGGAGCTGCACTGCTTGAAGAAGTGCCCGCAAATGCGTCTGTGTGGACGACACCAGTGCAACAAAAAGTGCTGCGACTGTGCAGAGCAAGAGGCCGGGGTCCCTTGTGAGAAAGTCTGCGGCAAAACCCTCAACTGTCGCAAGCACAAATGCGCGGCCACTTGTCACAGTGGACCTTGCTACCCTTGCAACCGTGTTGTCGTCCGGCAGTGCAGGTGCGGCAACAGTAAATTGACTGTTCCCTGCGGCACGAGTTCCAAGATCAAACCCCCGCCGTGCAACAAGCGTTGCAAGGTGCCGCCCATCTGCCATCACCTCAAAGCGGAGACTCACAAGTGTCATCAGGGCAGCTGTCCGCCGTGCAAGAAGGTGTGCGGCCTGATTTACAAGAGGTGCAAGCACACTTGCATCGCAACCTGCCACACGAAGGTGTGGGTGTCTTTGCGTAGTAACGGAGTCACGACCCCGGCGGGTCCCTGGGAGCTTGAGAAACCAACGGTCGAACTGAAAACTTTGCCCTGTCCGCCTTGCCCGGTCTCGACACCGGTTCTGTGTCTGGGGGGTCACGAGGTCACTTCTCTGCCCTGCCACGCGGCCAGACCCTCGTCTTGTGGCAGAATGTGTGGGCGGCCGTTGGCATGTGGCAATCATACGTGCGAACTCGAATGTCACAGGGTGAAAACTTCAACGGATGAGAGAGGAGTTCTCTGTATGGAATGTGAGAGGCCATGCACGTTGCCACGCGTCGAGGGGTGTTCGCATTCGTGTCCAAGGGCCTGTCATCCAGCGCCTTGTGCACCTTGCAAGCAGATGGTCCGGTTGCCGTGTCATTGCGGGATAAACAGTCTTTACCGACATTGCAACGAGCTGACGTCAGCGAATGCGGAAGAACGGAGCGAGTTGCTGCGATGCGGAAACCAATGTCCGAAGAACTATCCCTGTGGGCATCGGTGCACAAACGACTGCCACCCTGGCGAGTGCAAAGACGCAGAAAAATGTGTCCGCAAGGTGAGACTCTGGTGCAAATGCAAGCGCATCAAGAAGGATTTCACTTGCTTGGAATTGCGGAAAGAAACGATTGCGGTGGAATGCGACGACGTTTGCCAGCAGTTGCTTAAAGAGAAGAAGGAGCGCGAGGAGGCTGCCATGGCGTTGCAAAGGCAGAGAGAGGAGTTGCAGAACGAGGAGGAGGTGAAGAAGTTTCTGCGGAAGTTCAAGCCGCGGCGAAAGGGAAAGGATAAGTTTAGAAATAGGAATGTCGAGCAAGAGGAGGCCGGAGGAAATTACCGAAGGTGGATGCTACTGTTGGCAGGGTGCGTTGTCATTGTCGCGGTGATTTACGTTATCTTCCAGGGTAGGGGTGCCTTATGA
- Protein Sequence
- MQRFKQIQERDQVSIERYLEVNNLIDESSEDEDEEEKDEMRENVSKVLSCYKGEKADTERVLSYLTNTFQSGGAVCLICISTIKKVDPIWNCSKCYAFLHMTCILPWIRDSLSYKHQHGIQPLWGCPKCRNDYKEEDIPKAYKCFCGKVDDPPYQPWCIPHSCGYICAKTLNPPCSHKCTLLCHPGPCPPCAKVVKADCYCGKQIGAQRRCNNRGWSCGKVCGKKFSYCDHTCQEPCHEEKECPPCPETANVPCHCGQKEEWKYCKEVNWSCDTPCARPLSCGVHTCDKTCHKAGDCGQCPQEIDRTCPCGKKRYPGSCKDKRPPTCGNTCGKPLDCGSHFCSMRCHPDRCGQCLEVVSKVCRCGSLQKEYACSKELHCLKKCPQMRLCGRHQCNKKCCDCAEQEAGVPCEKVCGKTLNCRKHKCAATCHSGPCYPCNRVVVRQCRCGNSKLTVPCGTSSKIKPPPCNKRCKVPPICHHLKAETHKCHQGSCPPCKKVCGLIYKRCKHTCIATCHTKVWVSLRSNGVTTPAGPWELEKPTVELKTLPCPPCPVSTPVLCLGGHEVTSLPCHAARPSSCGRMCGRPLACGNHTCELECHRVKTSTDERGVLCMECERPCTLPRVEGCSHSCPRACHPAPCAPCKQMVRLPCHCGINSLYRHCNELTSANAEERSELLRCGNQCPKNYPCGHRCTNDCHPGECKDAEKCVRKVRLWCKCKRIKKDFTCLELRKETIAVECDDVCQQLLKEKKEREEAAMALQRQREELQNEEEVKKFLRKFKPRRKGKDKFRNRNVEQEEAGGNYRRWMLLLAGCVVIVAVIYVIFQGRGAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -