Basic Information

Insect: Cryptocheilus praepositus
Gene Symbol: salm
Assembly: GCA_033815515.1
Location: JAWWQZ010000093.1:1134072-1144250[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.3e-05 0.0026 18.6 1.0 1 23 403 425 403 425 0.98

2 9 9.6e-06 0.0011 19.8 2.1 1 23 431 453 431 453 0.98

3 9 0.06 6.6 7.9 3.8 2 23 821 842 820 842 0.98

4 9 4.2e-08 4.6e-06 27.3 0.6 1 23 848 870 848 870 0.97

5 9 5.3e-07 5.8e-05 23.8 4.9 1 23 880 902 880 902 0.98

6 9 0.002 0.22 12.5 1.9 2 23 1206 1227 1205 1227 0.97

7 9 0.035 3.9 8.6 1.4 1 14 1233 1246 1233 1247 0.92

8 9 4.5e-05 0.005 17.7 1.5 3 23 1442 1462 1440 1462 0.96

9 9 1.3e-07 1.4e-05 25.7 0.7 1 23 1468 1490 1468 1490 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.3e-05	0.0026	18.6	1.0	1	23	403	425	403	425	0.98
2	9	9.6e-06	0.0011	19.8	2.1	1	23	431	453	431	453	0.98
3	9	0.06	6.6	7.9	3.8	2	23	821	842	820	842	0.98
4	9	4.2e-08	4.6e-06	27.3	0.6	1	23	848	870	848	870	0.97
5	9	5.3e-07	5.8e-05	23.8	4.9	1	23	880	902	880	902	0.98
6	9	0.002	0.22	12.5	1.9	2	23	1206	1227	1205	1227	0.97
7	9	0.035	3.9	8.6	1.4	1	14	1233	1246	1233	1247	0.92
8	9	4.5e-05	0.005	17.7	1.5	3	23	1442	1462	1440	1462	0.96
9	9	1.3e-07	1.4e-05	25.7	0.7	1	23	1468	1490	1468	1490	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGCATTACCAGGCGCCTCGAGTGCCGTGGCATGAAGCAACAGCGCCAAGAGAAGAATTGCCAGCCCGGGGAAGATAATGACTTCACGTCGGACGGTGAAGAAAGTGGCGGCGGAGGTGGAATGGCGGACGAGGCTGTCGACCTCACGGCGGCACGTTCCCATCAGGATGAAGACGACAAGGATCAGGAGGACCCTCTGGAGGAGGACGAGGATGAAGGCGTTGACGAGCAGGACGAACaagacgacgacgaggagggTTCCCGCAAGCAAATGCGCCATCGACAGGACGCGGAAAACAACAACAATTTCGTCGAGGGGGGTCCGCCAACGGGAATCTTTCCGCCAGCCGGCACTAGTCACGTCACCCTGGAGGCATTGCAGAACACAAAGGTGGCTGTTGCCCAATTCGCAGCAACCGCGCTGGCCGGTGGAGCCGACAGCGAGGCGGCTCTACAAGATTTGGCCCTTTTGCAAAGTACTCTCTATACCCTTCAGCATCAGCAAGTATTCCAGTTGCAGCTGATCAGCCAACTTAGGCAGCAACTGTCTATAACTCACGGACAGGGAGTTCCGTCGCAACAACAGCAAgtacagcagcagcagcagcagcaacagccgcAGCAAcatcaacagcagcagcaacaacaacaacagcagcagcagcaagtgACGGCGATTGAACCTTCCGATAGCAAGGAAGCTTCGCCGTCTCCAGTTATTCATCCAAAATCATTATCGCAACTAACTTCGCCTCCCTCGTCAAGACCGCCCAGTCATCATCAGCAAACGTCGCCGGCGCCCCTAACACCTAATTTGCCTCAAGAACGTCCGGCGCCTTCCAGCAGTGCTTCCCCCTTGAATTTACCCCTGCCGCCGTCCAACATCGCAacgacgacgaccacgacgagCAGCAGTCAGATACCGTTCTCACATCAAATGCCACCCCTGTGCTCGATAAGCTCGTCCCTCGCCTCGTCCATCATTACGAACACCGATCCACCTCCGCTACACGAGCCGAACACGTTGGAGATGCTCCAGAAGCGGGCGCAGGAGGTCCTGGACAACGCGAGTCAGGGACTGCTAGCGAATAATTTGGCCGACGAACTCGCGTTTCGCAGTGGGAAAGGATCAAGATTGTCACCGTATGATGCGAAGAACGGCGGCGGCAGAGGGGAACCATTCTTCAAGCATCGATGTCGCTTCTGCGGGAAGGTCTTCGGCAGCGACTCAGCCCTCCAGATCCACATTCGATCGCACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGGAGCCGATTCACGACGAAGGGGAACCTGAAGGTCCACTTCCAGAGGCACACAGCCAAGTTTCCCCATGTTAAGATGAACCCGAATCCCGTTCCCGAGCATTTGGACAAGTACCACCCGCCCTTGCTTCAGCAGATAGCTTCCGGTCAGAGGCCAATGCCGTCCCCTCCGCCGCCTCCGCCCACGCATCCGTCGTTTCATCCGGCGGCGGCGCACGGTTTTCTGCCGCCCCAGCCGCCCTTACCCCTCAGTCTAGCCCTGCCCGGTATGCCACCCCTCTACCGATCCTCGCTCATTAACCACCGGGACGATCAGGAGGTGCCGGAGAATCTGAGTAAACCTGTAACCGCTCCGACGACGTCTCCCCATTCTCCAGCCGGGCTCTCGAATTCTCGTCATTCCTTTCACGACAATCAAcatcagcaacagcagcagcaaccgaCGCAGCAGCCGCAGCACAAACCGATAGAGCAGCAGAGAGATGAGATTAAGTTGGAACAGGCATCGCCAGTGCAGGAACAGTATCAGAGACCGGCGAGTAGGGAGGGAACTAAACACATCACGCCGAAAAGGGAGCCCGAAGAGGCGGAAGAGCAGCAAGAAGAGGAGAGCGAGGACTTCGAAGAAGCTTCGAGACGATACATGAATTCGCCGCAATCCTCGGTTAATCCGTTGTCACAGCCGCAAACGTTCGAAGACTGCAGTATGGACAGCAAAATTAGCGGGAGACTCGAAGGTGACGGTGATATGGAAGTGGACGAGGAGATCGAGGAACAACCTGAAAATCTTTCCGGAAGAGGAACGATAAATCGCCTGCCTCAACAAATGGTCACTTATCCCGGTGCTTCGCCGGCCAGTAGTAGTACGAGTAGCGGAAGTCTACAGACGTCCTTCGCTGGAGTTCTGTTCCCCGGACCACCTACTCAGCATCAGATACCCCACCCAGTGTCCACGGCCAGTACGACGCCCGTTGTTTCAACTAGCGAGATGATCGACCCGGCCAAAGATCCGGCAATCTATTCCAGTCTCTTGCCCAGACCGGGCAGTAACGACAATTCCTGGGAGACACTCATTGAGATAACGAAAACTTCGGAGACGTTCAAGTTGCAACAGCTCGTCGACAACATCGAGCATAAACTGACCGATCCGAATCAGTGCGTCATCTGCCACAGGGTGCTCTCCTGCAAAAGCGCATTGCAGATGCATTACCGTACGCATACCGGCGAACGTCCGTTTAAGTGCAAGATTTGCGGACGAGCGTTCACGACGAAGGGCAACCTAAAGACCCACATGGGCGTGCACCGTACGAAACCTCCCATCAGAATGTTTCACCAGTGCCCCGTCTGTCATAAAAAGTTCACCAACGCCTACTACCTTCAGCAGCACATAAGAACGCATACCGGTGAACCGACGGATCTGACACCCGAGCAGATTCAGGCGGCAGAGGTGAACGAATTTACCCCCGGCTATCCGCACCATCCCCTAGCCTCGTTCCTACCCCAAGGCTTCCCACCCTTACATTCTGCGGGGGCAGGATTTTCCATGGGGTTTCCACCAACGAGGCAACCGCCGATGGAGCGGCAACAGCAGGAGAACGACATGGACGCTAAGGATGAACCGAGACAGCAGCTCACCCAACACCAACAGCAGCAGCGGCAAAGGTACATGGACGAGCATAACGAGGACGTCGACGAGcaggaggacgaggaggaagacCGCAGGGAAGATGATGAGAGGTGCGACGTGAACAATCGCGACCGAACGAGCGCTGAAGAGAACGACGAGCAGGAGCACGACAACGAGGAAATGGAGCACAAGGACATATTGCCGACCTTCTCGACGTCGCTGGCCGCGCTCGAGAATCAAGTGAGGACGATCACGACGACGGCAGCGACGGTGGCGAACGTCACCGCCAGGTCACCCTCGTTTCACCGCTATAACGGCAGCGAGAAGAGCAACAGTCCGCCCAGTAGTGGTGCCCCGCTCGATTTGACGCCCCGAGCTTCTTCGACTCCAGCGTCTGTTGCGTCAGCACCGACGCCGCCACCGCAAACTACGCCCCAGCACCACGCTCACCCCTTCGGAATGTTCGCCGGCCTATTACAGGCCGTCTCTTCGTCACCTTCGACGACAAACACGATGGGCTCGAGTATAAACAGCATCAGTTCGATGAGCGCCGTTACTCCGGGCACCGGAACCCCTGGTGGACCGCTCGCCTCGCTAACTACGTCGGCCGTTTTAGCCGCCACTTCCACCTACAATCCGCTCGGCCTCGCTGTCGGAGGGTCAGCAGTACGTGGAAACACTACGTGTAATATCTGCTACAAGACATTTGCGTGCAACTCCGCGCTGGAGATTCATTACCGCAGTCACACGAAGGAGCGACCTTTTAAATGCAGCATATGCGACCGAGGCTTCTCCACGAAGAAGGACGGCCCCACCTCGGAGGTGTGCTCCTGCATGGAGCAGCGATTCTCTTTTTTCGGCACGAGTTCGATCGCCCCGCAACAAGCCGATCCCCAATACGAATCGCGGCCGGCGAGGTCGAGTGCCGGAAGTGAAGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAACGGAAGAGCCGGGGGCGGACAGGAACCGGAGGGGGGCGGGTTAGGCCGACGTCTGTCTATCCTGCCGTCTGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCCTCCTGGGCAACATGAAGCAGCACATGCTGACTCATAAGATCCGCGACATGCCGCCGCATCTCTTCAGCGATGCGAAGTCACAGCATCAGCAACAATCGCAGCTGGAGCACGAGAGTTCTAGGAGTCCGATGTGCACTGATGATTCGAGTTTACCGCCGCCTCCACCACCCCCACCGCCACCCCCGCCAATGCCGCCCACTTCCACTGAGTCAACAGTGCCCGTGAAGAGATCACCGCCGGAGGGTGATCTGCCAGCACCAAAGAGACCAGCCAGCGTGCCGAGCAAGCACTTGTGCGTGGTATGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCTGATCCATACGAGAACTCACACAGGCGACAAACCATTCCAATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGCACACATATGTGGACCAACGGAGCATCGCGCAGAGGACGACGCATGTCATTGGACCTACCTCCGTTACCCATCACGCCCAAGGACTCGGAGTTTCTTCAACGACGGCCGGATCTCTTTTACCCGTATCTACCCGCGCCATTCCTTAATGGTGTTCAACAAAAACTGAACGAGATCTCCGTTATCCAAGGTAACAATGGCCTGCCAGGCCACTCCGTATGTGCCAGCAAATACGCCGGATTGTTCGGTTCGGTATATGGCGCCGGCGCCGGTGGATTTCCAATGGAGAAACAACCCATGGCTCCCACCAGCAACGGTCCGCTATCCGACGGGAAATCTGCAATTCCAACTGGCTCGATGCTGTTCCAAACACCATCCCCGTCTCATTCTCCAGGCACGCCGTCGTCCAACAGCGGAAGTCAGAGCACGGCCAGCGTGCCTTCCTGGACGGGAGACGCGTTGCAGCATCATTTCGACAGGGAGCCACCCACCAGAACAGAAAACAACTCGACACCCCCTACTGCACGACTTCCACCGCCTCCAGCGCCGAGAGGCGAAGGTTTGGCTGCGTGA
Protein Sequence: MQLMRWSITRRLECRGMKQQRQEKNCQPGEDNDFTSDGEESGGGGGMADEAVDLTAARSHQDEDDKDQEDPLEEDEDEGVDEQDEQDDDEEGSRKQMRHRQDAENNNNFVEGGPPTGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLRQQLSITHGQGVPSQQQQVQQQQQQQQPQQHQQQQQQQQQQQQQVTAIEPSDSKEASPSPVIHPKSLSQLTSPPSSRPPSHHQQTSPAPLTPNLPQERPAPSSSASPLNLPLPPSNIATTTTTTSSSQIPFSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDAKNGGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPTHPSFHPAAAHGFLPPQPPLPLSLALPGMPPLYRSSLINHRDDQEVPENLSKPVTAPTTSPHSPAGLSNSRHSFHDNQHQQQQQQPTQQPQHKPIEQQRDEIKLEQASPVQEQYQRPASREGTKHITPKREPEEAEEQQEEESEDFEEASRRYMNSPQSSVNPLSQPQTFEDCSMDSKISGRLEGDGDMEVDEEIEEQPENLSGRGTINRLPQQMVTYPGASPASSSTSSGSLQTSFAGVLFPGPPTQHQIPHPVSTASTTPVVSTSEMIDPAKDPAIYSSLLPRPGSNDNSWETLIEITKTSETFKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRTKPPIRMFHQCPVCHKKFTNAYYLQQHIRTHTGEPTDLTPEQIQAAEVNEFTPGYPHHPLASFLPQGFPPLHSAGAGFSMGFPPTRQPPMERQQQENDMDAKDEPRQQLTQHQQQQRQRYMDEHNEDVDEQEDEEEDRREDDERCDVNNRDRTSAEENDEQEHDNEEMEHKDILPTFSTSLAALENQVRTITTTAATVANVTARSPSFHRYNGSEKSNSPPSSGAPLDLTPRASSTPASVASAPTPPPQTTPQHHAHPFGMFAGLLQAVSSSPSTTNTMGSSINSISSMSAVTPGTGTPGGPLASLTTSAVLAATSTYNPLGLAVGGSAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKKDGPTSEVCSCMEQRFSFFGTSSIAPQQADPQYESRPARSSAGSEEKPKRRRRRPEERKSRGRTGTGGGRVRPTSVYPAVCLPPLMPPALGLLPSDHVLLGNMKQHMLTHKIRDMPPHLFSDAKSQHQQQSQLEHESSRSPMCTDDSSLPPPPPPPPPPPPMPPTSTESTVPVKRSPPEGDLPAPKRPASVPSKHLCVVCNKNFSSSSALLIHTRTHTGDKPFQCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQGNNGLPGHSVCASKYAGLFGSVYGAGAGGFPMEKQPMAPTSNGPLSDGKSAIPTGSMLFQTPSPSHSPGTPSSNSGSQSTASVPSWTGDALQHHFDREPPTRTENNSTPPTARLPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00966175;
90% Identity: iTF_01255878;
80% Identity: -