Cpra016374.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- ZNF496
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000284.1:2360484-2367063[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 1.5e-06 0.00017 22.3 3.1 1 23 347 369 347 369 0.99 2 30 3.6e-06 0.0004 21.2 1.1 1 23 375 398 375 398 0.95 3 30 2.5e-05 0.0027 18.5 0.7 1 23 404 426 404 426 0.98 4 30 6.2e-05 0.0068 17.3 0.9 1 23 432 454 432 454 0.96 5 30 0.00022 0.025 15.5 2.9 1 23 460 482 460 482 0.97 6 30 0.00016 0.018 16.0 0.5 3 23 490 510 488 510 0.97 7 30 0.01 1.1 10.3 0.7 1 20 617 636 617 638 0.93 8 30 0.0095 1 10.4 1.7 1 22 708 729 708 731 0.89 9 30 0.00016 0.017 16.0 1.4 1 23 763 785 763 785 0.98 10 30 2.4e-05 0.0026 18.6 1.6 1 23 791 814 791 814 0.97 11 30 1.7e-05 0.0019 19.0 0.4 1 23 820 842 820 842 0.98 12 30 2.7e-07 2.9e-05 24.7 1.1 1 23 848 870 848 870 0.99 13 30 3e-05 0.0033 18.3 0.9 1 23 876 898 876 898 0.98 14 30 6.7e-05 0.0073 17.2 3.5 1 23 904 926 904 926 0.96 15 30 1.1e-05 0.0012 19.6 0.7 1 23 1041 1063 1041 1063 0.99 16 30 3.3e-07 3.6e-05 24.4 0.9 1 23 1069 1092 1069 1092 0.96 17 30 0.0027 0.3 12.1 0.8 1 23 1098 1120 1098 1120 0.98 18 30 6.9e-05 0.0076 17.1 4.0 1 23 1126 1148 1126 1148 0.95 19 30 0.00026 0.029 15.3 5.4 1 23 1154 1176 1154 1176 0.97 20 30 7.6e-05 0.0084 17.0 5.0 1 23 1182 1204 1182 1204 0.99 21 30 0.045 5 8.3 3.0 2 23 1244 1266 1243 1266 0.96 22 30 5.4 6e+02 1.7 0.3 1 13 1271 1283 1271 1294 0.79 23 30 0.019 2 9.5 3.4 1 23 1342 1364 1342 1364 0.98 24 30 0.2 22 6.2 3.5 1 23 1392 1414 1392 1414 0.96 25 30 0.00055 0.06 14.3 2.3 2 23 1421 1443 1420 1443 0.94 26 30 0.00028 0.03 15.2 0.1 1 23 1449 1471 1449 1471 0.98 27 30 0.0005 0.055 14.4 2.3 1 23 1477 1499 1477 1499 0.98 28 30 0.002 0.22 12.5 5.3 1 23 1505 1527 1505 1527 0.97 29 30 6.8e-05 0.0074 17.1 0.1 1 23 1533 1555 1533 1555 0.97 30 30 0.51 56 5.0 6.7 1 23 1561 1583 1561 1584 0.91
Sequence Information
- Coding Sequence
- ATGGAGTCGGAAAATTCTGTTGTACTAGAAACTTGCAGGGAAGATGCAATGTTAATACAAACCGTAAAAACTATTGTCACACAGGACAATCAAAATGATTTGGAGAGCGAGGGATTCTTTTTAGTGACGAACGTTCAAGATGACCAACAAAGACACATGGAAGTAGTCGTTCAAGAACCGTGCATGGAAAGTCAGACTGAGGAGAGGATACTGTGGTCGGATCTGTGCAGGGTATGCGCAAATGTCAATGACCATTTGATACCAATATTCGAGGGAGAAGGAATAGAGCATGAATTatgtaacaaaatacataaatatttacctATACAAGTATCTGAAAGCGATACTCTACCCTTACAACTGTGTTATCACTGTGCAGCGACGTTATTAGCTTGGCATGAGCTTGCAGAGGGTTGTTTAAATGCTGAGCGTAGACTCCTAGAGATACAAGAATCATTACATGCAAAGCAACAGTATGTACAACCACCAACGTCAGAGGAAAGGTTACAACGCTCACCACAAGCTATTGCAGTTGTGGCAAATTCCATTGAATCActtccTGTTGCGGAACCGGTTGAGTTAAAAGATGACGGAAGCGGAAGGTCCCCTGCTAACAATACCGATAGGTCCGGTAGTGTCCAGACGTCATTTAAAGTGTTCCTTGATATGCAGAATGTATTTTGGAAACCGTACAAAAGAAAGTGGCAGCTGCAAGAGAAAAAGCCGCCGATAGGAGCCGATTATAATTCAGTATGGATCGCCGTGATGGATTCAACACTGGATCAGCCTGTCATAGCGGCTGACCCGCTGCGCAATAATGAATTTGAGGTGAAAGGGGAGATCTGTAATGACCGGAAAGAGGATATAATGAGAAAGCAAAAGATGCCGCAGCTTACCTCTGGACCAGCAATAGCATCGATCGAGAAGAAAGAAGACATCGCAACAAAAGACCCAATTTATTCTAACAAATTGCAGGATGTTAAGGAATTCAACGCAAACAATGCAGACAACAGTGCGTTTACAGACGTACATGGATCTTATCAATGCGTCGAGTGTGGAAAGTGTTTCAAGCTGAAAGATTCGTACCTGAGGCACATGAGAATACACAGAGATGAACGCCCTTTTACCTGTCACGTGTGCGGCAAGCAATTTCGAGATTCTGGCGGGCTGTCGCGTCATCTCAAAGACGTGCATgcgaaattgaagaattttaCGTGTGATATTTGCGGAAAATCGTTTGCATCAAAAGCGACGAGAGACGACCATCGGCGAACGCATACAGGCGAGAGACCGTATATTTGCGACTCCTGTGGGAAGACTTTCAAATCGAAAGCCTCCCTCTACATTCATAGCAAGCTACACACCGACGAGTTCCCGCATCCGTGCTCGTATTGCAATAAGAAGTTCCGTAGGAGGCAGGAAATGTTAGCGCACGTGACCACTCACACGGGAGAGAAGAATTACGGATGCGACGTGTGTTCGAAGAAATTCCGGGTGAAGTCGGAACTCGTTAGGCATAAACTGGTTCATTCCGAGAGCAAGCCATTCGTTTGCGTCAAGTTTGGCCAACAACGGAAGAAATCCTTTGCTGCATACTGTTCGTCTCATTCTACTACTTTATGCACACAGAATATAACGCAAGCGAACGTCAAGCATCCAATAGTCGAGACGACGGATTCCGATAGTAATGCACGATCAAAAGAAGTGAGCGAAGACGGAAATCCGGAGACTAGCTTCTGCGATAGCGagcatataaatatatcaaaCAGTGCCAACGTTAATTCCACTGACTCATTGTCCTCTGCCACTGAAACTGCAACGAGTACAAAGCGAAGTATTAAGAAGTTCCACACCTGTGTCACGTGTCGTCGTATATACAAAAGAGAATATAATTTACTACGTCATGCGATAAAATGTAAGAAACTCGCGTCCCGAGATAAGGATCCCCTAGATACGGGCGACATCGATGCGCCTATTTTAAGCGATAATCCCATTGAAGCAACGCAGACCGCAATGATTTCGAATGTAAAGACTGAAAGTGTCTGCAGCGAGGCCGCTGGCAACGAAGAAACGAACTCGTGGGGCGAGTTCGACGAAACCACAAGAAAGTCTGGCACCTCTCACCCTTGCATGTACTGTGACTACACAACGAAACGCAAAAAGCTGCTCAAGCTCCACGTCGTCGAATCTCATCCAGAATACGCCGAAAAGAAGCACAAAAAGTTGCGCTGCATAGACAAGGAAGCAGTGTCGCGCGCTCGAATGGAAGTCGACGGCAAGATTTATTACCACTGTAACGAATGCGGGAAGAACCTCTACTCGCCGTACACCTTCTCCTGGCACATAAGGATCCACACCGGCGAACGTCCGTTCACCTGCCATTTGTGCGGCAAGCAATTCCGTGTGAATCAGGGTCTTGCCAGGCACCTGCGCGAAACCCACGCCGGCATAAAGAACTTTCCGTGCGATCTCTGCGGCCGCATGTTCTCGACAAAGCGAAACGCAGAGGATCATAGACGCATTCATACCGGCGAGCGGCCGTACGTTTGTAACGTTTGCGGGAAGACGTTCAAGCAGAAAGCCTCTCTCTTCGTGCACAATCGAACGCACTCGGACGTGTTCCCGTTCAAGTGCAGCTACTGCGATCAAAGCTTCCGCACTCGGCCGCCGCTGATGGTGCACATAACTAAGCACACCGGCGAGAAACCGCACGCCTGTGACGTGTGCGGCCGATGTTTCCGCATAAAATACGAGCTCAAGAGGCATCGTCTCATACACTCCGACGAGAAGCCGTGGCAGTGCACGAGGTACGTAAGTCGAGCCGTGCGATTAGAGGCGGCGTACAAGTCGGATGACGATAAAAGCCGCAGGACACTAAGTGGCCGCGAGCGAGTCGACAAGATTAACGCGCGTACGCACTTAGGTGTCGAATCGAAGAACTGTTGGGCCCCGACGCTGCGTAAGATTCGCGATGCGAACGACAGGCGCGAGGCAGACTCGAAGGAGAATGAGCGCGACGCTAAAGAGGCGTGTGAAAAGCTGACTGCCCGCTCGAAGCGGACACTAGAACAGCACGCTGAAGTGGCACGTTCGAAAACGAGCGTCGACGGATTCACCTATTACAAATGTCGCGACTGCGGCAAAGCGCTCTCGACTGCGTACAATTTCCTAATTCACCGCAACACCCACACCGGCGAAAAGCCGTACACGTGTCACGTCTGCGGAAAGAACTTCCGTTCGGCGTCCGGCTTGAACAGACACGTGCGCGACGTACACACGGGCATAAAGAACTTTCCTTGCGACATTTGCGGCCGTTGTCTCGCGTCGAAGGCCTCGAGGGACGAGCATCGTCGAACGCACACAGGAGAGAGACCGCACGTCTGCGAGACCTGCGGGAAGTCGTTCAAGCAGAAAGCCTCGTTGCACGTTCACAGACTCTTCCATTCGAAAGATCTTCCTCATCAGTGCACGCTTTGCCAGCGCAGCTTCCGACGGAAGCAGGAGCTGGACAagcatattcatattcataccgAGCAGAAACCGTACTCGTGTAACATCTGCGACAAACGCTTTCGCAGCAAGGGCTGCATTAGTCGGCACAAGCGTACCCACAGCAGTCAGAAATCGCACGCCTGCACGCTTTGCGGCGCCAAGTGGCAGATTGAGGCCAACAGCGTCGTACCGACGATCGCGATCCAAGATACGAAAGCGGAGGAAGTGCAGTATGTCGAATGTGCCCACTGCGATACGCATTTCATAGACGTTAAGTGTTTCGTGCAGCACATGAACGTCGAGCACGACGCTCACGCCTATTACTGCTCCTACTGCAAAGCAGCGTATCGCGGCTCGGCCGCGGTATTCCAAGAGCACATGTTGTTTCACAGCACTGCTCATGAAACAACGACAGAGATCGCAGAGAGCGCCGGTAAAgctctgttggagctaaaatgcGAAAATGGGCTAGACATTGTTGACACGGCGAAACAGGAAAACACTTCTGACGTGTCGGGCTCGCAGAAGATCTACACGTGCTACACGTGCGAGGAACGCTTTCTGAAGAAGCATGACCTGAAGAAGCACATAAATGCTCACAAGACAACGAAAGTGATACAGAGCCAAAACGAGGCAGAGTTAGTAAAGCGGGCGAAGCAGGTGATCAACGAACGAATATCTTACTGTTGCGACATATGCAAGAAGCTGATGTTCACCAAGCGAGGCTTTCTGCGTCACATACGCGTGCACACGGGAGAACGACCGTGCAAGTGTGACTTGTGCGGCAAGTGTTACAGAATCGAGCAGGACTTGGCTCGACACATAAGGGACGTGCACGAAGGTCTGAAGAAGTACGTCTGCGATATCTGCGGGCGCGCCTTTGCTAACAAAGGTGCCAAAGACGATCACAGAAGGATCCACACCGGGGAGCGTCCGTACACGTGCGAGCATTGCCCGAAAACCTTCCGCACTCTCAACTCCATTTACATACACAATCGCGTGCACACGAATTACAAGCCTCATAAGTGCTCGTACTGCGGCAAGTATTTTCGAAGTAGACAAAGGCTGAGCAATCATGAGACGACGCATACGGGGGTGAGAGCGTATTCGTGCGAAATTTGTGCTAAGCCGTTTTCGGTCAAAGGCGAACTTATGCGGCACCGCACCATCCACAGTCAGGAGAAGCCGTTCAATTGCCGATGTTGCGACCTCAGATTCGGTCAGAAACGATACTTGCGAAATCATATCAAACAACATCATAGGGAGGAGGCGTCATTGCTGCTGGCAGAATTGAACGAGAAGCGCAATTAG
- Protein Sequence
- MESENSVVLETCREDAMLIQTVKTIVTQDNQNDLESEGFFLVTNVQDDQQRHMEVVVQEPCMESQTEERILWSDLCRVCANVNDHLIPIFEGEGIEHELCNKIHKYLPIQVSESDTLPLQLCYHCAATLLAWHELAEGCLNAERRLLEIQESLHAKQQYVQPPTSEERLQRSPQAIAVVANSIESLPVAEPVELKDDGSGRSPANNTDRSGSVQTSFKVFLDMQNVFWKPYKRKWQLQEKKPPIGADYNSVWIAVMDSTLDQPVIAADPLRNNEFEVKGEICNDRKEDIMRKQKMPQLTSGPAIASIEKKEDIATKDPIYSNKLQDVKEFNANNADNSAFTDVHGSYQCVECGKCFKLKDSYLRHMRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFTCDICGKSFASKATRDDHRRTHTGERPYICDSCGKTFKSKASLYIHSKLHTDEFPHPCSYCNKKFRRRQEMLAHVTTHTGEKNYGCDVCSKKFRVKSELVRHKLVHSESKPFVCVKFGQQRKKSFAAYCSSHSTTLCTQNITQANVKHPIVETTDSDSNARSKEVSEDGNPETSFCDSEHINISNSANVNSTDSLSSATETATSTKRSIKKFHTCVTCRRIYKREYNLLRHAIKCKKLASRDKDPLDTGDIDAPILSDNPIEATQTAMISNVKTESVCSEAAGNEETNSWGEFDETTRKSGTSHPCMYCDYTTKRKKLLKLHVVESHPEYAEKKHKKLRCIDKEAVSRARMEVDGKIYYHCNECGKNLYSPYTFSWHIRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKNFPCDLCGRMFSTKRNAEDHRRIHTGERPYVCNVCGKTFKQKASLFVHNRTHSDVFPFKCSYCDQSFRTRPPLMVHITKHTGEKPHACDVCGRCFRIKYELKRHRLIHSDEKPWQCTRYVSRAVRLEAAYKSDDDKSRRTLSGRERVDKINARTHLGVESKNCWAPTLRKIRDANDRREADSKENERDAKEACEKLTARSKRTLEQHAEVARSKTSVDGFTYYKCRDCGKALSTAYNFLIHRNTHTGEKPYTCHVCGKNFRSASGLNRHVRDVHTGIKNFPCDICGRCLASKASRDEHRRTHTGERPHVCETCGKSFKQKASLHVHRLFHSKDLPHQCTLCQRSFRRKQELDKHIHIHTEQKPYSCNICDKRFRSKGCISRHKRTHSSQKSHACTLCGAKWQIEANSVVPTIAIQDTKAEEVQYVECAHCDTHFIDVKCFVQHMNVEHDAHAYYCSYCKAAYRGSAAVFQEHMLFHSTAHETTTEIAESAGKALLELKCENGLDIVDTAKQENTSDVSGSQKIYTCYTCEERFLKKHDLKKHINAHKTTKVIQSQNEAELVKRAKQVINERISYCCDICKKLMFTKRGFLRHIRVHTGERPCKCDLCGKCYRIEQDLARHIRDVHEGLKKYVCDICGRAFANKGAKDDHRRIHTGERPYTCEHCPKTFRTLNSIYIHNRVHTNYKPHKCSYCGKYFRSRQRLSNHETTHTGVRAYSCEICAKPFSVKGELMRHRTIHSQEKPFNCRCCDLRFGQKRYLRNHIKQHHREEASLLLAELNEKRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01255838;
- 90% Identity
- -
- 80% Identity
- -