Cpra004650.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- ZNF236
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000110.1:1957818-1981006[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 2.8e-05 0.0031 18.3 1.4 2 23 180 201 179 201 0.97 2 27 0.00013 0.015 16.2 0.6 1 23 207 229 207 229 0.98 3 27 3.9e-06 0.00043 21.0 0.3 2 23 235 256 235 256 0.98 4 27 0.013 1.4 10.0 0.2 3 23 264 284 262 284 0.96 5 27 0.00016 0.018 15.9 0.6 2 23 295 316 295 316 0.98 6 27 7.7e-07 8.4e-05 23.3 1.1 1 23 337 359 337 359 0.99 7 27 2.6e-06 0.00028 21.6 0.3 1 20 365 384 365 387 0.96 8 27 1e-05 0.0011 19.7 0.9 1 23 393 416 393 416 0.97 9 27 0.016 1.7 9.7 4.5 3 23 427 448 425 448 0.97 10 27 1.9e-06 0.0002 22.1 2.8 1 23 567 589 567 589 0.98 11 27 0.0004 0.044 14.7 3.3 1 23 595 617 595 617 0.99 12 27 0.05 5.5 8.1 0.8 1 23 623 645 623 645 0.97 13 27 0.0014 0.16 13.0 0.9 1 23 649 671 649 671 0.98 14 27 0.00036 0.039 14.9 3.6 1 23 726 748 726 748 0.98 15 27 3.7e-05 0.004 18.0 4.9 1 23 754 776 754 776 0.99 16 27 1.1e-05 0.0012 19.7 2.1 1 23 782 804 782 804 0.98 17 27 0.00011 0.012 16.5 7.2 1 23 810 832 810 832 0.98 18 27 0.011 1.2 10.2 0.0 1 23 1149 1171 1149 1171 0.97 19 27 0.014 1.5 9.9 1.6 2 23 1196 1217 1195 1217 0.96 20 27 5.7e-05 0.0063 17.4 2.8 1 23 1223 1245 1223 1245 0.99 21 27 1.1e-07 1.2e-05 26.0 1.4 2 23 1335 1356 1334 1356 0.98 22 27 0.00041 0.045 14.7 3.3 1 23 1362 1384 1362 1384 0.99 23 27 0.003 0.33 11.9 3.9 1 23 1390 1412 1390 1412 0.97 24 27 0.00039 0.043 14.7 2.5 1 23 1418 1440 1418 1440 0.98 25 27 5.8e-05 0.0064 17.3 1.5 2 23 1657 1678 1656 1678 0.97 26 27 3.1e-05 0.0034 18.2 3.3 1 23 1684 1706 1684 1706 0.98 27 27 8.8e-05 0.0096 16.8 5.0 1 23 1712 1735 1712 1735 0.97
Sequence Information
- Coding Sequence
- ATGTTAACTGAACAATGCATAATTACTGAGGGCCCAGGTGCCGACACGGCACTAATTGGCTTTGTTACGACAGACGGTGGTCGCACACTTTTAGCAGTAACAGaaCACGATAATGGCATACTGGAGATTAGGACATCGCCTGTTACATTAATGCAGCAAGGGGACACTGTTTCGCCTTCCTTCATTAAGACAATGGATGGAAACGTTATATTACATCCCACCATCTTACAGTTGAATGTAGAAAACATTGTCGGTAATGGAATTCACCAGGCAGCTTTATTACCAATACAAACTTTTGAAACCACGCCTGTTGTTTTTGAACAAGCAATGGTATTGCAAGAGAAAGGGAACAACGTCGGACAAGAAAATTATACAACGGATGCTGTTTTGACAGAGAATCAAACAATATCGACAGAGAAGGAGCAGGATTGTCAAGAGGATGCGCCACAGCCTGTACATGCGGACAAGAATGCCCATAAACGGAGCCCTGGCAGGCCAAAAAAAACTGGAGCAGTTTCTCGCGCATCACCGGATATGAAATGCGACATATGCGGACAGGAATTTAATAAACAGACGCAATTCCGCAGGCACATGGAACAGCATGCAGAGGAAAAGCCGCACCGTTGTCCAAAGTGTCCTGCTTCATTTAATATACCGACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGAGCCTAAATGTCCAGAATGTGGCAGGAAATTCGCAAGAATGGCTAGCCTGAAGTCTCACATGCTGATTcacgaaaaggaagaaaatctTTTCTGCACGGAATGCGAGGACGCCTTTTCAACAAGAGCTCAGCTAGACGCACACTTGAAACTCCATGGCGAGAAATGGTCATCGGACGACGTACGAAAGTGTAAGCTTTGCAACAAGCAATTCGTTCAACCAGCCCTTTACCGACTTCATATACGTGAACATTACAGGTTGCAGACCAAGATAGTGAAGCAGACAAAACGGGGCACGAAGCATAAGACCATGTACAAGTGTACGATTTGTTTGAAGTCCTTTCAAAAGCCGAGTCAACTGATGCGACATATAAGAGTGCACACTGGCGAAAAGCCATTCAAGTGCCCAACGTGTGGCCGTGCATTTACCCAGAAAGGATCCTTGCAGATTCACATGTGGCAACATAATGGTATACGACCTCACACTTGCAATCTGTGTAACGCGAAATTTAGTCAAAAAGGGAACTTAAACGCCCATATTCTTAGAGCTCATAATGCGCCCGAAGGGGAGCCGATTTATGGTTGTACACACTGTTCGTGCGTTTTCAAAAAACTTGGCAGCCTTAACGGACACATGAAAAGAACGCACTCGAACCCTGTAGAGGAATCTCCTGTCCCTGCAAAATGCGACAGTTCTACAGAAGCAGATATGCGAGCGACTGTAAATAACGTAATCTCACAATTGGCATCTCTAGAATCGACAACGAACGATCCAGCAGATTCTACGAATTCTGGATCGACATCTATGGACAAGAGTGACATCTTGCAAAAAGCACTTAAGAATAGCGGCTTACCGAGCAAACAGAAAACCGTAGACCATGATCACTCCAAGAGAGAAACTGACGCTCGTACAGCGTACGTAACGTTGCTGGACAGAGCACCGGACGGTTCTATGAGgaaatatttaacgataaagCAGCGCAGCATAGGAAAAGTAAGATGGTACTCATGCTCATTTTGTCATAAAGAATTTAAGAAACCGTCGGATCTAATACGCCACTTACGTGTACACACTCAGGAGAAACCTTTTAAGTGCTCGCACTGCTTTCGTTCGTTCGCATTGAAGTCGACTATGATAGCCCACGAACGTACGCACACCGGCACGAAAAAGTATGCTTGCGGTTCGTGCGATGAAGCATTTGCGTGTCACAGTAGTCTCACTGCGCACGCAAGATTGCATGCAAAGCCGCACAAGTGCACTGTGTGTGACAAGTCATTCGGCGCGAGCGCCATATTGAAGGAACACATGAAAAGTCATTCGAAGGGAAAATCAAAATTGTCGCCGGAAGCGGAAATTCTCGTGCCGCAGATCGTCTTGCAGGAACCATTAGTTATCAACGACGCCGGCAATAAGATCAGTTTGGCACGCGTGCAGTCGAAACAGGGGCAGGTTTACGATAATCAAGATGTCGCAAGGCCGCACAAGTGTTGGGTCTGTCCTGCAGCTTTCAGAAAGATTAGTCACTTGAAACAGCATTACCGTAGACATACGGGGGAACGTCCGTataaatgctcgaaatgtgaTAGGAGGTTTACATCGAACAGTGTTCTTAAATCGCATTTACATACTCATGACGACACGAGACCATATAGTTGTTCAGTATGCAACACAAAGTTTTCCACTCAGAGTAGTATGAAACGACACTTGGTCACGCATAGCAACAAGAGGCCTTTCATGTGTCCTTATTGTCATAAAACATTCAAAACGTCAGTAAACTGCAGGAAACACATGAAGATACATAAACACGAATTGGCCCAACGTCAATTGGAGCAACAGAGAACTCAGGGAAGTAATCCGGGCAAAACGTTTGAGGAGCAGAAGGAAGTTATGCCATCGTTGTCTGAGAATTTAGGATTGTCCGAGGACATGGAGGTCTCGTTTCAACCGCAGATGGCACCAGATTTCACTCAAGCTTTCTCTGATCAATTTCAAAGTCTAACGGGGGACAAAGAAAAATCCTTTTTGCCAACGAGTAATGGAACGCAGTCAGTTGTTAATCaAAGTTTACCTGAAGTGGATACGAGTAATATAGCTTCAACTCAAACTCTGCACGCGGATGAAACTGGTACTATCACATTACCCAATTATTCAGGGGAACAAACTCTTACGCCGgaaagcaTACGTGAGATAGAAGAGACTTTGAATCAGCAATTATTTAACATGGGTGTGAATCTTAGCTTGAGCGGCAATCTTTCGAGACAAATGGACGAGACGAACGCAACTTCTCTCGAACCGAGAGAGCAGCCAGtcttaaatataatttacgagAACAATAAGCATTTAGAATCTTCCGGAAATGCAATATTCACGTCGCAGTTCGATTCTTTCGACATAAGTCAAATTGCATTACAACCAGATACCGAGATAGACATTGGCCTTAATACGGCAAACTCAGCGAATATGTCGAATATTTTTCCTAAAACCATACAGGATGAGCACCAATTAGTTCCTGTTCCTAGTACTAACAGCATAGGAGACGATCAAGTGAAATCGAATAGACATCTTATGGTAGTAAGTTCCGGTGATAACTGTTCTGAATTACCCAGTCTTGTTCAAGTGTGTTCGAAATATCCAAAGATTATAGCCAAAGCCGATACGACTGACCGAACAGAGATACGAACTAATGACGACCCTAAGAAACTGCAGGATGGTGCTGAATCTTTTGAAAACAATGTGGGTGGCATGAACTTTGCATGCGATCTGTGTAACGAGGTTTTCCAGAATTTGGCGCTGATGGAAGCTCATGCCAAGATACACACTTTACCCAACATCGTTTGTTCGGACAATACCGGAACGACGATATGCATAACTCAACCTGACTCCCTGCTTCAATGTCACATGTGCAACGAACGTGGATTTACAACGGCAGAATTGAAGGAACATTTGAAGACGCATTGCGGTACAAAAGAATATCAATGTACCGAATGTTCTCTACGCTTTTGTACAAACGGTGGTCTTAgtagacatttaaaaatgcacaTGAGCAAGAATAACAGAATACAACTCAGGCTACATAGTAAAACGCCCGAGAACAATTGGAATGCAACTGCAATGGAACCCGATAGTTCGCAGAGAGACACAATTTCATTGGATGCCAATATATCTAGCATTAATACGTTAGACGCTAAAATAAGATCAGATTCTTCCGTATCGGAGAAGGTTCTCTTGGACACTGTCGCAGAAACAGAAATCATCGACCGTTTGGAGGATGGTTTgatgaagaaagagaaaaaggagtACACcaacaaatgtaaatattgtccgAAAACATTTCGCAAACCCAGTGATCTCATAAGGCACGTCCGAACGCATACCGGAGAACGACCGTATAAGTGCGATTTCTGTAGTAAAAGTTTTGCCGTCAAATGTACATTGGATTCACATATGAAGGTACACACTGGAAAAAAGACATTTTGTTGTCACGTATGTAGCAGTCTTTTTGCAACGAAAGGCAGTTTGAAAGTTCACATGCGTTTACACACCGGTTCGAAACCGTTCAGATGTCCCATATGCGATTCAAGGTTTAGAACATCAGGCCACAGAAAGGTCCATTTGTTAAAACACACGCGGGACTGCAAAGGCAGTCCTACTAAGCGGaaacaaaaacatttaaaagtcGCTGCGATCGCAGAAGTTGCTGCAAGCCTCGAAAAGTCGGTCCAAAACGTATCTCAGCCCGTCGTAATTAGTAACGAAACCGAAGGAAACGTGGAGTACCCAACTGTAGATCAGATTGGTCTCGACACGGCTGGCCTGACTAATCAAATAGCCTTTAACGCCGACGGTACGATACTAAACAACAATTCCGTGTTGTCCATCAACGAGAGTAATCAGTTCGTCGCGAATCTACATTTCTTATTGACCAACGGCTTAGTGACGATTCAAGCGGACGACACTCTGATAACGCAGCCACAAAATTCGCAACCAGTCAATCACGACGGCACAAGAGTGAACGACCTCGTGACGGCAGGTTCTCTTACGATACCTTGTAGCGACGCGAACACTAATCAAATAGTAATAACGAGTCCAGTGGCCACGAATCCAGTAGCACACACTCCTGCACCCCCTTCTGTTGCTGCGACGGAACAAGCGTCGATGCAGTTAAATAACTGTATGGGCTTGATGCAAATCGCACGGGTCAACAATGTAACTGACAAACCGGAACGTGCCACACCGAAACAGGGAGCTAAGGGTGGGAATCAATCGAAGAAGGAGTGCGACATTTGTGGGAAGACATTCGTGAAACCGTGTCAGGTGGAAAGACACAAGCGTATACATACGGGAGAACGACCGTACAAATGCGACCTGTGCGCGAAGTCGTTTGCCCAAAAGTCCACGTTGCAGATGCATCAGAAGCACCATACGGGAGATCGGCCACACTCCTGTCCGTATTGTGAATTTTCGTTCTCGCAAAAATGTAATCTAGAGACGCACTTGAAGCGGGTGCATCAGTTGGATACGATCGAGGTGAAGAAGCTGAGACGGGGGCAGCAAGCTTTGAGCTCGAAGCTGGCGCAGGATAATTTGAGCGAGGCGAAAATACTCAACTTGGATGACATTTCGTTTGTCGAACTATTAAAGCAATAG
- Protein Sequence
- MLTEQCIITEGPGADTALIGFVTTDGGRTLLAVTEHDNGILEIRTSPVTLMQQGDTVSPSFIKTMDGNVILHPTILQLNVENIVGNGIHQAALLPIQTFETTPVVFEQAMVLQEKGNNVGQENYTTDAVLTENQTISTEKEQDCQEDAPQPVHADKNAHKRSPGRPKKTGAVSRASPDMKCDICGQEFNKQTQFRRHMEQHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHMLIHEKEENLFCTECEDAFSTRAQLDAHLKLHGEKWSSDDVRKCKLCNKQFVQPALYRLHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCPTCGRAFTQKGSLQIHMWQHNGIRPHTCNLCNAKFSQKGNLNAHILRAHNAPEGEPIYGCTHCSCVFKKLGSLNGHMKRTHSNPVEESPVPAKCDSSTEADMRATVNNVISQLASLESTTNDPADSTNSGSTSMDKSDILQKALKNSGLPSKQKTVDHDHSKRETDARTAYVTLLDRAPDGSMRKYLTIKQRSIGKVRWYSCSFCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMIAHERTHTGTKKYACGSCDEAFACHSSLTAHARLHAKPHKCTVCDKSFGASAILKEHMKSHSKGKSKLSPEAEILVPQIVLQEPLVINDAGNKISLARVQSKQGQVYDNQDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQRQLEQQRTQGSNPGKTFEEQKEVMPSLSENLGLSEDMEVSFQPQMAPDFTQAFSDQFQSLTGDKEKSFLPTSNGTQSVVNQSLPEVDTSNIASTQTLHADETGTITLPNYSGEQTLTPESIREIEETLNQQLFNMGVNLSLSGNLSRQMDETNATSLEPREQPVLNIIYENNKHLESSGNAIFTSQFDSFDISQIALQPDTEIDIGLNTANSANMSNIFPKTIQDEHQLVPVPSTNSIGDDQVKSNRHLMVVSSGDNCSELPSLVQVCSKYPKIIAKADTTDRTEIRTNDDPKKLQDGAESFENNVGGMNFACDLCNEVFQNLALMEAHAKIHTLPNIVCSDNTGTTICITQPDSLLQCHMCNERGFTTAELKEHLKTHCGTKEYQCTECSLRFCTNGGLSRHLKMHMSKNNRIQLRLHSKTPENNWNATAMEPDSSQRDTISLDANISSINTLDAKIRSDSSVSEKVLLDTVAETEIIDRLEDGLMKKEKKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDFCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPFRCPICDSRFRTSGHRKVHLLKHTRDCKGSPTKRKQKHLKVAAIAEVAASLEKSVQNVSQPVVISNETEGNVEYPTVDQIGLDTAGLTNQIAFNADGTILNNNSVLSINESNQFVANLHFLLTNGLVTIQADDTLITQPQNSQPVNHDGTRVNDLVTAGSLTIPCSDANTNQIVITSPVATNPVAHTPAPPSVAATEQASMQLNNCMGLMQIARVNNVTDKPERATPKQGAKGGNQSKKECDICGKTFVKPCQVERHKRIHTGERPYKCDLCAKSFAQKSTLQMHQKHHTGDRPHSCPYCEFSFSQKCNLETHLKRVHQLDTIEVKKLRRGQQALSSKLAQDNLSEAKILNLDDISFVELLKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01255839;
- 90% Identity
- -
- 80% Identity
- -