Cpra018831.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- -
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000306.1:4534-11613[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-09 1e-05 25.6 0.0 4 39 13 48 12 54 0.92 2 2 2.2 3.6e+03 -1.8 0.3 30 45 860 876 858 876 0.88
Sequence Information
- Coding Sequence
- atggcaaaacgacaATATAACAAATGGCGTATGCAAGATATGAATGCTGCGATAGAAGATtataataatggaaaattacGTTTCAATGAAGTATGCAGGACATATGGTATTCCAAAACCAACGTTTAGACGTCATTTAACAGGTCTAAATACTCAGAAAAAAAtggggagaccaaaggatttacCTGAGCAAATGGAAACTGAATTGGAACACCATATTTTGAATTTGGAATCTAGATTCTTTGGTTTAACTATCAAAGATTTAAGGCATCTCGCATTTCAGTTGGCTGAAAAATACAAACTTCCGCATCGATTTAATAAGGTGCAAGAGTTAGCCGGTTGGAAATGGTATtacaaattcatgaaaaacCATCCAAAAATTGCCTTAAGAACACCTGAACCAACATCAATGGCACGATGTAAAggatttaataaaaagaatgtatcagaatttttcgataaatacGAAGAGATTCTGGATAATTTCGAATTTGGCCCTAACGAAATTTTTAACATGGACGAGACAGGTCTTAATACCGTTCATAAACCTGGTAGAATATTAGCGTTGAAAGGAAAACATCAAGTCGGAGCTATCACTAGCGGAGAACGCGGAATTAATACTACATGCATTTGTTGCATGAATGCCACGGGAGATTTCATTCCACCAATGCTGATATTTAAACGCAAAAGAATGACGGACGCCCTTAAACGTGGTGGGCCGCCTAATACGGTGTACACTTGTTCGGACAGCGGGTGGATTGTGGCTTCAATCTTTGTCGAATGGTTACAACACTTCATAAACcatttaaaattagaaaaacaGTCGAATCATAAAATACTATTGATACTTGATGGACATACCGCACATACTAAAAATCTAGAAGCCATAAACCTAGCTAGAGAATACGGTATTCTAATGCTTTCTTTGCCGGCGCATACTACACACAAACTACAGCCATTAGATAGATCTTTCTATAAGTCTTTAAAAAGCAATTTCAACAAAGAGTGTTCAACTTGGATGAGAAATCACCCTGGTGCAACAATCATGCAATCAAACATATCTGAAATTTTGGGATTGGCATATCCTAAATCGGTTTGTATGGACATCGCCATGAAAGGTTTTGAAGCTTGTGGACTATGGCCTTGCAATAGGCATAAAATACCAGATGAAGAATATGTAATGCTTGATGAAGAAGATGAAATAGCTCCAATTAGTGCGCAACTTTCGTATCCTGATCCTTCCGAAACGAATCAAACTGCCCAAGCTGACACATCAATTCGTGATGATATAGAGAATTTATCACCAATTTATCAAATTCCCGCTCGAACATCTAAAAGAACCTCAAAAGCTGTACTACTAACTTCGAGTCCTCATAAGAGTAGTTtggagaataaaataaatgaacaaaaaaaaccAAAGAAGCCAAGGAGACAACCTGAACAAAGTACTTCTTGGTGTAGGAAACGCTACATATTCCTACACTTGCGAAAATTGCAGAAGTACGATTTAGGAATAATGCGaCCACCTCTATATCGACATCCTGCTTTCGACGGGGGTGAAAACGGCCGCCCCAGGGAACATCAAGAGACGACTAACGGAGGACTAAGATGGGCTTTACGGAAGATGGATAGGGAATCCATCGAAGCAGCTGCCCTCGTCGAGGATTGGGGAACTGGACCACTGGACGAAGAGGACCAACACCCGGATGTCATGGCTTCAGAGTTCAATCTAGTATTGACAAGGATCTGTGATGCGGGAATGCCGAGAATAGGCATGAATCCATGCCGAAAATCGGCATATTGGTGGACAGCGGAGATCGCGAAGCTTCGAGAAAACTGCGTGCGAGCACGCCGCAGACTCTCgaaccgaagaagaagacgtcccTGGCCGGAAGAGGAAATAGAAGAACTCTTCCAACGTTACAGAAGAGCCCGCCGGgaaatgcgcacggcaatattccgcgagaagaggaaggcctgggccgaactcctggcgggaatcgacgaagacccctggggacggccgtataaagtggtgctccaaagaatgaggcagggcggtccACCAGTCTCCTCAAGACTGGAGCCGCAATTCTTGGAGCACATTTTAAGTCACCTCTTCCCACCCGACGAGGAAGAGGTGGGACGCCCCGCTGCTGGGAGCGTCGAAGTGTGGTCGGAGGACTATTATGTCAGTCCCGAAGAACTGATAGCAGTCACACATAGGCTTAAGTCGCGAAAAGTGGCCccggggccagacggtataccggcAAAAGCGCTTGCCGTCGCGCTCCAGCATGTAGGGAGCAAAATTACTCTCATCTTGAATACTTGTTTGAGGAGAGGTGTGTTCCCCGCATGCTGGAAAATAGCAAATCTCGTGCTActccccaagccgggacggCCTGCGGACTCCCCATCCGCATTCCGTCCAATATGTCTCCTAAACGAGGCAGCCAAGATGTTTGAGTCCATCTCAGCTGAGAGACTACAGGCGCACCTGTCACGGAGAGGCTGCGAACTCGATGACGGTCAATACGGTTTTAGACGTGGACGGTCCACGATTGACGCCATCAAGACCAGTGTGTTAGTGAAGCGGCAGaaacgaagaaaggaagaaacgaaaagaacaATGACCACGTTGAACGATATTCCCCGCGTCGCGGAAAATCTTAAGAAGGCAACCACAAAATCAGCTAAGACCCTTCATAAATTGGTTTTTGGAATCGAAGGCGACCGAGGCAACAAGAAACGTCTCCGCGCCTTTACGGGTTTTGACTTTGGCATAGAGACGCCACGATTCGAAGAGAAGGTGGTGGAAACCACGGCTTCTTTTGGTTTAGGTGAATTAGTAAGCATTTGCCATGTGCTTAATTTAGACTATGGTGGTACGAGCGAAGAAGTTTCCCGACGGATTTGCGAACATTTGACTGTACTGACACGTTTATATACGGTGAGCGGAGAAACGGCTACAGAATCTGAAGGCGAATCGGATCCGGAAGATGGAAATTGTACCATTCTCCCAGCTGAGATGAATAACAGTAGGCAGTCACCGCAAAGACTTACGGAAACGACGACGCGCGCCGACCAAGTTACCCGCGGGACCGTATTAGGAGGCCAGGAAAGGCCTagtttttcgttgaattttcggGACGTCGAGGACTCGATTAGGGATTTTAACGGAACCGATGGATATCCAGTAGAAACTTGGATGGAGGACTTCGaggataatgcaaatttattaggaTGGACGGAGTTgcagaaatttttgtttgcaaagaaaaagttgGCAGGAGTAGCGCGTCTATTTTTGCAAGGAGAAAGAGGGGTATACAGTTGGAAAATGCTGAAATCGCTTCTCACAAAGGAATTTTCAACCCGCATAAATAGCGCACAATTACACGAGATGCTACGCAGTAGGCGACTGAGGCGCGACGAAACATTGTACGAGTACTTCTTAGCGATGAAAGAGATGGGTGCGCGTGGCCGTATTGAACCGGACGCGTTAATCCAATACATTGTGGACGGTATTCCCGACGATCCAAATAAGAAGGCACAGTTATACGAGGCTAGGCAGCTGGGCGACCttaaagaaaaactaaaaatttatGAGAGAATACGAAATTTGACACGGCAACCAACGAGTGCGAGGCCTTTGATAAGAACGGAACCGACAACTCGGTTTCCGCCTAAACATGCCGCACAGATAGGAAGTTCAACACCACcatttcgatgtttcaattgCAACGAGGCCGGACAAATCATGAGGAGATTGGTCATCAAGGAACTCAGAAGACGTTGGAATAGAGGTAGCGCATTTACGGCTAATAAATTTAAGGAATTTGTCTCCGAATACCGAATCCAGCATGTTTTAATTGCCACGGCAACGCCCCATGCGAACGGGCAAATTGAACGTATCGATAGGTCCCTTACACCTCTATTGTCGAAATTAAGCCCGAGCACAGGTACTTGGTGCCAGGTATTATCCGAGGTGGAGTATGCCCTAAACAACACGGTTAACCGTGCGACAGGCGATACTCCTAGCAAGTTATTATTTGGTATCAATCAGGTAGGAGAGGTTCAGGACGATTTGAGACAGATTTTAGAAGAACAAAAAGCGGTAGATCGAAATCTGGAACAAACGCGAGAAAAGGCAGTAGCCCAGATACAAGCgactaataattataataaagcttATTATGATAAACGACACAAAAGTCCGACAAAGTACAAATTAGGAGATTATGTTATGATTAAGAACGTAGACATTACGCCGGgtgttaacaaaaactattaccTAAGTTTAGAGGGCCCTACGAGATTGTTAAGGTTTTAG
- Protein Sequence
- MAKRQYNKWRMQDMNAAIEDYNNGKLRFNEVCRTYGIPKPTFRRHLTGLNTQKKMGRPKDLPEQMETELEHHILNLESRFFGLTIKDLRHLAFQLAEKYKLPHRFNKVQELAGWKWYYKFMKNHPKIALRTPEPTSMARCKGFNKKNVSEFFDKYEEILDNFEFGPNEIFNMDETGLNTVHKPGRILALKGKHQVGAITSGERGINTTCICCMNATGDFIPPMLIFKRKRMTDALKRGGPPNTVYTCSDSGWIVASIFVEWLQHFINHLKLEKQSNHKILLILDGHTAHTKNLEAINLAREYGILMLSLPAHTTHKLQPLDRSFYKSLKSNFNKECSTWMRNHPGATIMQSNISEILGLAYPKSVCMDIAMKGFEACGLWPCNRHKIPDEEYVMLDEEDEIAPISAQLSYPDPSETNQTAQADTSIRDDIENLSPIYQIPARTSKRTSKAVLLTSSPHKSSLENKINEQKKPKKPRRQPEQSTSWCRKRYIFLHLRKLQKYDLGIMRPPLYRHPAFDGGENGRPREHQETTNGGLRWALRKMDRESIEAAALVEDWGTGPLDEEDQHPDVMASEFNLVLTRICDAGMPRIGMNPCRKSAYWWTAEIAKLRENCVRARRRLSNRRRRRPWPEEEIEELFQRYRRARREMRTAIFREKRKAWAELLAGIDEDPWGRPYKVVLQRMRQGGPPVSSRLEPQFLEHILSHLFPPDEEEVGRPAAGSVEVWSEDYYVSPEELIAVTHRLKSRKVAPGPDGIPAKALAVALQHVGSKITLILNTCLRRGVFPACWKIANLVLLPKPGRPADSPSAFRPICLLNEAAKMFESISAERLQAHLSRRGCELDDGQYGFRRGRSTIDAIKTSVLVKRQKRRKEETKRTMTTLNDIPRVAENLKKATTKSAKTLHKLVFGIEGDRGNKKRLRAFTGFDFGIETPRFEEKVVETTASFGLGELVSICHVLNLDYGGTSEEVSRRICEHLTVLTRLYTVSGETATESEGESDPEDGNCTILPAEMNNSRQSPQRLTETTTRADQVTRGTVLGGQERPSFSLNFRDVEDSIRDFNGTDGYPVETWMEDFEDNANLLGWTELQKFLFAKKKLAGVARLFLQGERGVYSWKMLKSLLTKEFSTRINSAQLHEMLRSRRLRRDETLYEYFLAMKEMGARGRIEPDALIQYIVDGIPDDPNKKAQLYEARQLGDLKEKLKIYERIRNLTRQPTSARPLIRTEPTTRFPPKHAAQIGSSTPPFRCFNCNEAGQIMRRLVIKELRRRWNRGSAFTANKFKEFVSEYRIQHVLIATATPHANGQIERIDRSLTPLLSKLSPSTGTWCQVLSEVEYALNNTVNRATGDTPSKLLFGINQVGEVQDDLRQILEEQKAVDRNLEQTREKAVAQIQATNNYNKAYYDKRHKSPTKYKLGDYVMIKNVDITPGVNKNYYLSLEGPTRLLRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -