Cpra011391.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- bab1
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000246.1:444111-446145[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-15 7.9e-12 45.2 0.1 3 45 354 396 352 396 0.92
Sequence Information
- Coding Sequence
- ATGGCGACCGCTTCGCAGCAGTACTGTCTCCGTTGGAACAATCACCGTTCAAATCTCTTAACCGTCTTTGACGAACTCTTACAAAACGAGGCCTTTACAGACGTTACCCTCGCCGTCGACGGCGGCGCACTAGTAAAATGTCACAAAATGGTCCTAGCAGCGTGCTCCTCGTACTTCCAAACACTCTTCATCGACCTGCCTTGCAAGCATCCGATCGTCGTCCTGAAGGACGTGAAGTACCCCGAAATCAAAGCTATCCTCGAGTACATGTATCGTGGGGAGGTGAACGTCGCACAGGAACAACTGGGTGGTCTCCTGAAGGTCGCGGAGGTGTTGAAGGTGAAAGGATTGGTCGAGGAAAACGGTCCGACTTCCGGCGGAAGTGGATCGACCGGAAGACGCGAGGAGGCAGAGACTTCGATGTCACCACCCCCTGCAATAACCACTAGCACCACGACCAGCAGTGCAGCAGCACATAGCAGCGGACACGTTTCACCACCTTGCCACTCGACCGGCGGAAGTTCGTACAATCTTTATGGGAAATCACCGGTGGATAGAGTTCACGGTCGCCTCTCTGTGCCGATGTGGGCATTTTCTGGTCTTCCGATACCTCAGCATCCCTCTTCCGGGCATCAGCCACCGCCACAACACCCGTCTGCATTGTCAGGAAGTTATGACAATGGTTTCGAGACCTCGCCGATGAAGCGGAAGAAGTTCTCGAATTTGCTGATGAATCGCGATACCCCTATATTGAGAACGGTGCTTGGACAAGGACATGCCGATAGTTCGCAGGGAATTCCGCTGTTGCATTCGGAAAATCAGGAGGGCCAGCTCAGATCGACCAGCAACGGATCGACGAATGACAGCGATCGAAGGAATAGTACAGACTTATTGCCACACGGAGAAGCCGCGCACAGTCCCTACACGGATGTTTCCTTCATGGACGACGACGAGAAACAGCCCAGTCCGCAGTCTTTTGTCGGCGACACGAAAGCCGGTATTGTAAACTACATTGCCGCACAGAAGCCTGAATGGAAACGTTACAAGCAGTACACACGGAATGACATAATGTCGGCCATCGAAGCTGTTCGATCTGGGATGAGCGCGTTACAAGCGGCACGTAAGTACGGTGTGCCGTCTCGCACGCTTTACGACAAAGTGAAAAAGCTAGGCATCACGACATCACGACCGTTCAAACGAGCGTCGAACGGAAGTGGTGCCTGTTTCCCGTACGGAATAGGCGGAAACGCAAATGGGGGTATTTACGGAGGTGCCTTATCGGAGGGTGAGAACGAGAACAGTAATGCGATTATCGAGAATCCTGCGTCAATTTTGGAGACATCTTATATTAAAGCGAGAGATACTGCCTTCGACCGAGAGTCGTTGATGGACATTGGGCGGTGCAGTCCGAGTCCTGTGATCCATTCCATTAAGCAACAGCATCAACAACAACAAGAACTGCAGCAGCAACAAACTAACGACGACGAGGTTGAGGACTTGTCCATAAGTCGTAAGGCGCAAGATGTAAGAGTCATAGTGCCGCCAACTATGATGGTTAAAGAGGAACAGTCGGAGCTGGGACCTGATAACTcaaatcgaaattaa
- Protein Sequence
- MATASQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTLAVDGGALVKCHKMVLAACSSYFQTLFIDLPCKHPIVVLKDVKYPEIKAILEYMYRGEVNVAQEQLGGLLKVAEVLKVKGLVEENGPTSGGSGSTGRREEAETSMSPPPAITTSTTTSSAAAHSSGHVSPPCHSTGGSSYNLYGKSPVDRVHGRLSVPMWAFSGLPIPQHPSSGHQPPPQHPSALSGSYDNGFETSPMKRKKFSNLLMNRDTPILRTVLGQGHADSSQGIPLLHSENQEGQLRSTSNGSTNDSDRRNSTDLLPHGEAAHSPYTDVSFMDDDEKQPSPQSFVGDTKAGIVNYIAAQKPEWKRYKQYTRNDIMSAIEAVRSGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRASNGSGACFPYGIGGNANGGIYGGALSEGENENSNAIIENPASILETSYIKARDTAFDRESLMDIGRCSPSPVIHSIKQQHQQQQELQQQQTNDDEVEDLSISRKAQDVRVIVPPTMMVKEEQSELGPDNSNRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01255460; iTF_01255788; iTF_00393689;
- 90% Identity
- iTF_01255788;
- 80% Identity
- iTF_00393689;