Basic Information

Gene Symbol
ct
Assembly
GCA_033815515.1
Location
JAWWQZ010000317.1:3756874-3773362[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-27 7.3e-24 84.1 0.0 2 72 504 575 503 580 0.95
2 3 3.4e-32 1.7e-28 98.9 0.0 3 77 913 988 911 990 0.96
3 3 1.4e-30 7.1e-27 93.7 0.0 3 75 1143 1216 1141 1220 0.95

Sequence Information

Coding Sequence
ATGATTACCCTCCGCCGTGCGAAATCGTTGCGAGCTGACCTCGTGACGATTCGAGCAGAAGGAACGGACGATCTCGATCTAGCCATAATCAGCCAGCTGGTTGAGGAGGTCTCAAGGTTACAACAGAGTCTGCAGCGCCTTCAGGAGACGAGCACTCAAGCGACAGCACGCCTTGAGGAGGAACTCGAAGCGCGCAGGCAGCACATCAGCAGACTGGAGAGCAAACTGGAGAGACAGAGGGACTATGACGACCTGAAACGGGAGATCAGTGTGCTGAGGTCAGTCGACCTTTCGCAAATTCCGACTGGCGAACCTGGCAAGAGCCTGGAGCACCTTCTTATGGAACGCTCTAAGGCACTCCAACAGGCCGAGAACCTAAAACCGGCGAGCACGCCCGACGCACTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGCACCACCTTCGTCCCTCGTGTCCTCCCAACAGCAACAACCACCGCCGCCGCCCCCGGCAGCAGTCTCCCTTCCGCCACGTTCCACCCCGACCCCCTCCTCGGCCACCTCGACGACCTCGAGCCTTCTCTTCCCACCGCCCCTCCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGATTATGagccagcaacagcagcagcagcagcagcagcaacaacagcagcagcaacagcagcagcagcagcaacaacaacagcagcagcaccaacagcagcagcagtcgCAATCGTCGCAACTGACGCAACCGCAActccagcagcagcaacaagcCCAACAGCAATCGAGTCAAATGGCGCAGCTGgcccaacagcagcagcagcagcaacaacaacagcaacagcagcagcaacagttgCAGCAAGCACAGCCGTTGTTGGGGCTGCACCCGCCGACGACGCCCAGCAGCCTGAATCATCTTCCATCGCCGACCGACCCGTCGTCGACCTCGAACACGCCGGCTAAGTCGAACACGCCACTCGGCACGACGCCGCTAGGATGCCTGGACGCAGCCGAGAAGGCACCGACGCCCGTCTCCGGGCACGAGACGCCCGCCCCGCCGACGCCGTCCTCCACGACTGCCCTCACCTCGCCGCCGAGCTTTCAACCCCCCACGTCGATGGTCGAGACCACCACGTCGTCCACGTCGATCAACGGCGGAGGCATCACGCCCGGCATTCCGAGTGCGCCGCCGCCGAAGAGTCCTGCCGACCAGGAGTCCTgtcacaacaacaacaacagccaTCACCTGGCGAACAACAATATCGGGGCCCTGAGCGTGCTCGACACGCTGAAGAGTCCGTTTCGCTTCGACGACCGAACGCATCCGTTCAGATTCGGCGATGAGTTCGGGGCCGCCGGAATGGCGGGCAGGCTGGGCGAATCTCTCATTCCGAAGGGCGATCCGATGGAGGCGCGGCTGCAGGAGATGCTACGCTACAACATGGACAAATACGCGTCGCAGAACCTCGATACCCTGCACATAGCGCGGAGAGTGAGAGAGCTGCTATCGATACACAATATCGGTCAGAGACTGTTCGCCAAGTACGTGCTTGGGCTGAGTCAAGGCACAGTGAGCGAGCTGCTGAGCAAGCCGAAGCCGTGGGACAAGCTTACTGAAAAGGGACGCGACAGCTACCGGAAGATGCACGGTTGGGCATGCGACGACAACGCCGTAATGCTGCTCAAATCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCAGCTTTTGCACGCGGACCGCAGGATGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCCCACATCCTGTCGGAATCTGGGCATCTGCAGATGAGAGGAGAGCATGAGGTCTCGAACGACGCTGACAGCAAGAGTCCTAGCAGAATCGGTTGCCCGAGTCCGTTTAGCAAAGACAGGCTTGATAGCCAAAATAGGAGACTGAAGAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTTGTGAGGATTTACCAGGAGGAGCTTGCCAAACTTATGGGACGGAGGGTCGAGGATCTTCGTGGGCCACGAGATTTCCCACAGAGCGCGATATTTCCGCACTTTTTCAGTGGCGCCCAAGGGCTGCAAGGCATAGAGCGTACGCAAGAAGACATTAGACTGGCGTTGGACGCCTACCATCGCGAACTTCAGAAGCTAAACGCAGCACCAGGACAAAACCCCGCTTTGACAGGCTTGCCAGGTTTGCCAGGATTGCCAGGACTTCTGGCTCTCCAGCAACAGGCCCTTCAGCAACATCATTTAGCAGCCAACGGTGGTGGTGTGCAAGATCTGAGCCTCGGTAAAGTCGATCCAAGGAATAAAATGATAAACGGTGTGTCAGAGGAGGAGAAGGAAAAGATGGAGGAGGCGATGAGACACGCGGGAAGCGCATTCTCATTGGTGAGGCCGAAGCAAGAAGCGACGGGTCCTCAGTCGACGCCAGGTGGATCAAGCGCCAGCTCGCCACTTGGCAATTCCATACTTCCGCCAGCGATGACACCCAGCGAAGAATTCTCTGGCGCGGCAGCAGCTAGTCCTCTCCAAAGGATGGCGTCCATCACGAACAGCCTGATCAGTCAACCGTCCACACCGACTCATCACGCCGCCAATCAACGGCCATTGAAGGCTGTGCTTCCTCCGATCACGCAACAGCAGTTTGATCTATACAATAATCTCAATACCGAAGACATTGTGAAGAGGGTGAAGGAACAGTTATCCCAGTACTCGATCTCTCAGCGTTTGTTCGGCGAGTCGGTATTGGGTCTTTCTCAGGGATCCGTCTCAGACCTCTTAGCGCGTCCGAAACCTTGGCACATGCTCACGCAAAAGGGTCGTGAACCCTTCATCCGGATGAAGATGTTCCTCGAAGACGACAATGCGGTACATAAACTGGTTGCAAGCCAGTACAAGATTGCGCCAGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACGCCGATGAAACCGATGCCGCCGACAAAGTTGGTCCAGGAGCAACTTCAAAACGCGGCCAAGGCGCAGGCAGCTGCCCAAGCCGCGGCTCAGGCAGCAGCGCAGCACCAACAGGAAACACAAATGCAGCTCGGCCCGCCTCAGCAAAGTCCACAACATCCTCAGCATCCGCAACCGCCGCCGCCCATGATGCTGACACCGCCTGGTCCGCATCATCCTCACGCCCAACTCAACATTCAAGAACTCCAGAAgaagcaacagcagcaacaacaacagatGACCCTGCACTCGCCGCATCATCAGATGACGCCGTCACCCTTGCGAGGACTCCATCCTCATATTTCACCGAGCGTATATGAAATGGCAGCCTTAACGCAAGACCTCGACACGCAGACGATCACGACAAAGATCAAAGAAGCTCTACTCGCCAACAACATCGGACAGAAGATTTTCGGAGAGGCAGTGCTCGGCCTTTCACAGGGTTCGGTCAGTGAACTTTTGAGCAAACCCAAACCGTGGCACATGTTGAGTATAAAGGGTCGAGAGCCCTTCATCAGGATGCAGTTGTGGCTGTCAGACGCGCATAACGTCGATAGACTGCAAGCGTTGAAGAATGAGCGACGGGAGGCGAACAAGAGACGACGAAGCAGCGGGCCAGGTCACGATAACAGTTCGGACACTTCCAGCAACGATACGGCCGAATTCTATCACGCAGCCTCTCCCGGACCCGGACCGGCGTCCGCCAAGAAACAACGAGTGCTCTTCTCGGAAGAACAGAAAGAGGCACTCAGGCTTGCCTTTGCCCTCGATCCGTATCCCAACGTCGCGACCATCGAGTTTCTCGCCGGCGAGCTAGCCCTTTCGTCGAGGACAATAACGAACTGGTTCCACAATCACCGAATGAGACTGAAGCAACAAACACCGCACGGCCAGCCGGAGCCCCAATCTCCACGGGAACCCGGCCAGCCTTTCGACCCTGTCCAGTTCAGACTTCTGCTGAACCAAAGATTGCTCGAGATACAGAAAGAGAGGCTTGGACTCGGGAACGTCCCGTTACCGTACTCTCCGTACTTCAACCCTAATCTGGCAGCCCTCGTGGGCAACGCTTTGAAGGAGCAGTGCTCCGGTCTCGACCTTTCGATGAACTCGCTGAAGCGGGAGCCAAACCAGGAATTCGAGGACGAGGACGTCGAGGATGCGATGAGCAACCTCGGCAGCGAAGACTCCGAGGGCTCTGCTGGCAGTATAAAGAGGGAGCCCGCGGAAACGCCCACCGCGCCAACCACCGTCAGGTCCAATAGGAGAAAGCCGGCGGCGCCTCAATGGGTCAATCCGGAGTGGCAGGAACCCGCCAGAACGGGAGACGAGGTGATCATCAACGGCGTCTGCGTCATGCAAACGGATGACTACGGCGTGAAAAGGGAGGCTGAGGAAACGATCAGGGTTGAGCCGACGCCTGTGCAGGACAGATACGAGGAGGATGCACAGAGTGACGTGTCTTCCGTGTCGGGCAACAACGGGCAGGACCGTGACAGTCCTCTGCCGAGTCCAAAATCAGGTCTAGGTCAAAATAGTCCAGTTGCGTCGCCGAGACCACCCTCCGCGCAGCAGACGCAACAATCCACGGAAGGAAGTCCCAAAGAAGTGAAGCACGAGCCAGAAGAGACGTGGGACTATTAG
Protein Sequence
MITLRRAKSLRADLVTIRAEGTDDLDLAIISQLVEEVSRLQQSLQRLQETSTQATARLEEELEARRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAENLKPASTPDALGGLSSPLQRASTASPHGVGGAPPSSLVSSQQQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRIMSQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQSQSSQLTQPQLQQQQQAQQQSSQMAQLAQQQQQQQQQQQQQQQQLQQAQPLLGLHPPTTPSSLNHLPSPTDPSSTSNTPAKSNTPLGTTPLGCLDAAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETTTSSTSINGGGITPGIPSAPPPKSPADQESCHNNNNSHHLANNNIGALSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPSRIGCPSPFSKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPRDFPQSAIFPHFFSGAQGLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPALTGLPGLPGLPGLLALQQQALQQHHLAANGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQEATGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHAANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQETQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHAQLNIQELQKKQQQQQQQMTLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNSLKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPAETPTAPTTVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSGLGQNSPVASPRPPSAQQTQQSTEGSPKEVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00221825;
80% Identity
iTF_00393481;