Cpra002527.1
Basic Information
- Insect
- Cryptocheilus praepositus
- Gene Symbol
- retn
- Assembly
- GCA_033815515.1
- Location
- JAWWQZ010000035.1:10901226-10910075[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-14 8.7e-11 42.5 0.0 17 79 115 175 110 176 0.90
Sequence Information
- Coding Sequence
- ATGGGAGAGAAACGACGGGCCGGTGCTAATAAGCTTCGTGAAAATAGAGAAACGGATACTATTTATGTACCGTCTATGTATCGCGGTGAACGGGAGTGTAAACTAAAAAATACGTTTGTCGGCACGTCGGACGAACAGTCGCCGAGGCTTATTGAACGCGATGTTTACGATCAATTGGCACGGGGCGTAGTAAAGATTTCGGATAATTTTGAGTGCACGTGTTTAGGACATTTCGGGGCAAATTACGATGCGTACAGAGAATTGTTAATGACGGGACGAAGGATGAGGAACAAACGAGTAGGCGCTATCTGGTTCGCTCCGAACCCGGAGCGTTACGGGATGAGAACGCCGATCAATCGGCTGCCCATAATGGCAAAATCGGTATTGGATCTCTACGAGCTCTACAACTTAGTCATCGCCCGGGGCGGCCTGGTCGACGTAATCAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAGTAA
- Protein Sequence
- MGEKRRAGANKLRENRETDTIYVPSMYRGERECKLKNTFVGTSDEQSPRLIERDVYDQLARGVVKISDNFECTCLGHFGANYDAYRELLMTGRRMRNKRVGAIWFAPNPERYGMRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -