Basic Information

Gene Symbol
ARID5B
Assembly
GCA_033815515.1
Location
JAWWQZ010000314.1:7089085-7097185[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-24 8.7e-21 74.6 0.0 1 89 242 328 242 328 0.95

Sequence Information

Coding Sequence
ATGGAAAAAGAGAAGGGAGAAAGGGGAGTGAACTCTGTTAGgGACGAAGTGTTGACGATCTCTGAAAAGGTAGTGGTCCGCGTCCACGACCTTGTGACGTGGTTATCACCTACATTAGAGTGGTCATGGGGTCGCGAAGTGTCATACCTTCCGACGCCGTCGTCCTCTCCGGAAAGCAGTCCCCTGAGGTACGAAATGCCACAACCTCAAGTCCTCACGGACCCAGGCATCGACTTTTCCGACGTCGACAAGCAGCAGAAGGAGTTCGAGTGCAGTATAAACTCGTCGTCCAGAAGAGCTGAGCATTGCTGCCAAACTAAAGTAGTCGTGCTTTCCTATCCGAGGTATTGCCGATATCGTGCGTTGCTGCGCCGATTGGAAGGTGCCGAACCTTCCTGGTTGTGTTCCTCTATTGCCGCTGCACTCGGAGGTTTCACTGCTACGCCAGGCACGAGGGTACTCTTCTGCAGGGACACGTTTGATTACCCTGACTTGGAGACCCACGAACTTCTATGTAATCACTTAGCGCCTAAACTTAAGGGACGACCACGAAGAAAACGCAAGAAGCGCAGTGCATCACCGGGGGAGTCCAGCAATGAGAGCGAAGCCTCAGTTGCATCCACCTCGAAAAGTGCATCGACAACTTCCAGCATCAGCGTGCCCGGGACCGTTGGCAGACCACCTTTGTCGGGGGTTCGTAGAAGCGAACGGAAAACGAGCGCTGAAGAAAAGAAATTCATGTTTGATGTCCAGAACTTCATGAAAACGCGCGGCACGCCCGTCGGAAAAATGCCATTATTAGGATATAGACAGATCGATCTGTACTTGTTCTATACAAAAGTTCAATCATTGGGTGGCTACGACTCTGTAAGTGCTGGCCGACTTTGGAAATCCATATATGATGATATTGGCGGAAATACGGGATCCACCAGTGCTGCGACGATTACACGTAGACATTATGAAAGGTTGCTATTGCCGTACGAAAGGTACCAACGGGGTGAAGAATCGAAACTTAGACTGACACACGGGAGACGAACCAAGAGTAGCAGTATTTCCGAAGACACGGAAGTTAAACAGGAATCTAATAATAGTTATCCGTCGGAAGCATCGCTACCATCCTCGGAAACTCCTTCCACGACTACCACAACACCACCTTTACAGCCAGTCCCCTCCGCTACGCCGTTCCTGTCTGTTGACAAGCCAAAATCGGAAAGTGGCAAGACATCATCGTTACGTAGCGTTCGTGTGAAGCCAGAACGTCTGAAATCCCTGAACACGATAATCGCCAACAGTACTCCGCCTGCCAACCAGCAAGCCAATCAACTGCCAAGTTCACCACCTTCCTCAAACACATTGGTGTCGACGCCATGCAGCACACCCTCAACGACACCCACAAATGGAACTGGAAGTCAGAGCGTCCTCGAACGACAACTAAACAGTCCTCTGATATCGCAACAAGTGCCACCTTCATGTTCTCCGCCTGGTCAGCCAGTCAGTGCAGTTTCCACGAATGCCGCAACAGTGGTCACCTTGACACCACCTCCAGAGAAAGACATGAAAGAGATCAAATTGGACACAAAGCAAACCACGCTATTAGCGCAAGGCAAGGAAAATATTCCCTTATTTGGTGAGAAGTCGATTTTCGCCGAAAAAGCGATCGTAGCCCCTAGATCGCCAGAAGTAATCGACCTGGAAACGGAAAGCGATACTAGCAGGGACAAAATTATCATTCCCAGCTTTAAAAAGCGTAAGTTAGAGATCTTGAGAGAAGGTGGCTTGGAGGTGACGGCCGTTGAGCTGGACGCAAGACCGAGCGTTATTCAGAGTAACGTCGCCCCTCCGCCTCCAGCGATGAAGACAGATGAAAAACCGCCTATTTCTTATCCGCTACCGGTCACGCCCAACTCCATCCCGAAGTTAATCTCGGTAACGGTGACGCCGGATATCGGGCACATGTTATCTTCGCCCCAAGAAAGTCAGAGTGCTCATCATCAGCCACGATTGCCGAACCAGAATAAGCAGCCGACTCatcacaacaacaacaacaacaaaaacaatacgacgaataataataacactaatgctaataataataatagtagtagtaatacgAGTAATAATAGTACCGCAAATAGTCGGGTGATAAACTTGGGCACGTCGAATAACGCCGCCCTCTTGCAACTCTATGCGAATGCGAACGTTACACCGGCGTCGACGATGAACGCGAATCAACGTTTCCTGCCGCCCAGTGTCCCGAACGGCAGGCTAATGCCGCCAAAAGTGACGCAGTCGAGGTCAATATTCGCGCACAACGAAAAGACCGTCTACGGGAACCCTAAGGATATCATTCTCGTACCACCGAAGTATCGTCCAGCGCCGCAACGTTTGCCTCCGCCACATCATCCCCATCATCATCATCCAGCGAGCAGCGCGACTGAAAGTAGTCAGGGTGGAGTTCTCGACTTGACGCAGAAACCCAACGAGAAACCAACTTTCTCGAGACCAAGCCTCGAAATCGTCAGGGTACCTGTCGTGCCAAGGCCTAATCCGCTGAGTCTAGACCTGAGGAATCAAGTGAGCAAAGACAAGCCTCAGGATTGTTCGAAGCGAGCCCAGTTCCCAGTTTATCAAAACGTTCTCGACAGCAAAACCATTGCCTCGAACAACTTAGAGATCACGCTTGTCAATCCGAAGCAGAAAAACAACCACATGAGCGGGCCGCACGTCCAAGTGCCAAGTCCGCCGAACCGGCCAGGCCAGATGACGCCTCAGCGGAGACAGCAGGTCAACGGGAAGTTCTCCGCAAGAAGCGAGCCCGTGTCTCCGTACACACCGAGAAAGCCAAGTAGTCATCCGGTGATACCGAACGTTCCGAATTTGAACAACCTGAACAGCGGGAATGCCTTTCCGCGGATGACGATGCAACAACAGATGAGCATAGGTCGAAGGAAAGCGGAGACAGGCAGGGATCAGCAACGTCGGATAAGTGAGGGCGATAAGCCGACGATAgcgcaacaacagcagcaacaagaGGCCAGGCAGGAAGCCGGTAGGCGACACAGTGTGCCCAGCATACCGTCCGGTTACGTGCCCAGTGTACCACAGAACAATCATCCGGCTTTCCTGCCGCAACTGCCAAACGCGCCTGGCAAGTTCCTACCAATGCTGGATCCGATGTACTACTCAGCGTTCTATAATGGTTTGTTCCATCCGCCGCTTCCACCCACCGCGGCCACATCCTTTCTACCGCCGGAATTCAACGCGTACTACAAGGAACTACTCGCTTCCTCGCAAACAAGACTGGGGATGACGGGGCAGCATCAGACAGCCCCGACGTCTAAGTAG
Protein Sequence
MEKEKGERGVNSVRDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYLPTPSSSPESSPLRYEMPQPQVLTDPGIDFSDVDKQQKEFECSINSSSRRAEHCCQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSASTTSSISVPGTVGRPPLSGVRRSERKTSAEEKKFMFDVQNFMKTRGTPVGKMPLLGYRQIDLYLFYTKVQSLGGYDSVSAGRLWKSIYDDIGGNTGSTSAATITRRHYERLLLPYERYQRGEESKLRLTHGRRTKSSSISEDTEVKQESNNSYPSEASLPSSETPSTTTTTPPLQPVPSATPFLSVDKPKSESGKTSSLRSVRVKPERLKSLNTIIANSTPPANQQANQLPSSPPSSNTLVSTPCSTPSTTPTNGTGSQSVLERQLNSPLISQQVPPSCSPPGQPVSAVSTNAATVVTLTPPPEKDMKEIKLDTKQTTLLAQGKENIPLFGEKSIFAEKAIVAPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVELDARPSVIQSNVAPPPPAMKTDEKPPISYPLPVTPNSIPKLISVTVTPDIGHMLSSPQESQSAHHQPRLPNQNKQPTHHNNNNNKNNTTNNNNTNANNNNSSSNTSNNSTANSRVINLGTSNNAALLQLYANANVTPASTMNANQRFLPPSVPNGRLMPPKVTQSRSIFAHNEKTVYGNPKDIILVPPKYRPAPQRLPPPHHPHHHHPASSATESSQGGVLDLTQKPNEKPTFSRPSLEIVRVPVVPRPNPLSLDLRNQVSKDKPQDCSKRAQFPVYQNVLDSKTIASNNLEITLVNPKQKNNHMSGPHVQVPSPPNRPGQMTPQRRQQVNGKFSARSEPVSPYTPRKPSSHPVIPNVPNLNNLNSGNAFPRMTMQQQMSIGRRKAETGRDQQRRISEGDKPTIAQQQQQQEARQEAGRRHSVPSIPSGYVPSVPQNNHPAFLPQLPNAPGKFLPMLDPMYYSAFYNGLFHPPLPPTAATSFLPPEFNAYYKELLASSQTRLGMTGQHQTAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01255324;
90% Identity
iTF_01255324;
80% Identity
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