Basic Information

Gene Symbol
KDM5A
Assembly
GCA_033815515.1
Location
JAWWQZ010000035.1:2167606-2182582[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-25 6.7e-22 78.2 0.0 2 89 109 192 108 192 0.94
2 2 3.2 1e+04 -2.5 0.1 49 81 823 853 820 858 0.65

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGGATTTCGATTACGAGGATCGCTTCGGAGTTTATCGTCGTGCGCAAGACATGGCTTGTGACCGCGGTGATTCGGATTTCGAATTCGCCATACCCCCGGAGGCACCGGTCTTCGAGCCGAGCATCGAGGAATTCCACGACCCTCTCGGTTATATCGCGAAAATACGCCCGATCGCGGAGAAGTCTGGCATCTGCAAGATCAAACCGCCACCCAACTGGCAACCACCGTTTGCTGTGGACGTTGATAAATTCAAATTTGTCCCGAGGATACAAAGGCTAAACGAATTAGAAGCCAAGACAAGGATAAAGCTTAATTTCTTAGATCAAATCGCAAAATTCTGGGAACTGCAAGGCTCCTCTTTGAAAATTCCTCTGGTAGAACGTAAGGCCCTGGATTTGTATTCTCTGCATAAGATAGTTACGGACGAGGGCGGTATCGAGACAGTAACAAGGGAGAGAAGGTGGGCAAAGATTGCCAATAAACTTGGTTATCCATCTGGACGAAGTGTGGGGAGTATACTAAAGAACCATTATGAGAGGATCTTATATCCGTTTGATGTCTTCAAGCAGGGCAAGACACTGACTGACATTAAAATTGAACCAGAATCTGACGTGAACGAGAAGAAGGATCGCGATTACAAACCACATGGTATAATATCTCGGCAACAGATAAAGCCGCCAAACGAGAAGTTTTCGCGTCGTTCAAAGCGATTTTCTGGACAAGAGGAAAAGCAGGAAGTGTCTATCAAGCAAGAAGACTGCAAAGAAGAGTGCGACTCCGACAATGACTGCAAGGACAGTATCATCAAAGGAAAATGTTTGGATCCTGACAAGGATAACAGCAAagagcttaaaaagttacagtttTACGGTGCCGGACCGAAAATGGCCGGCTTTAATACCAAAGATGCGAAGAAGGCGAATAAAACCAGGGGTGTCAAACTCGTTTACGAATTTGATCCACTGGCTAAGTACATTTGTCACAATTGCGGAAGAGGCGACAATGAGGAAAGCATGTTATTGTGCGACGGATGCGATGACAGTTATCACACTTTTTGCCTGATGCCACCTTTAACGGAGATACCAAAAGGTGACTGGCGATGTCCAAAGTGTGTCGCCGAAGAGGTTTCTAAGCCAATGGAGGCCTTCGGTTTTGAACAGGCACAAAGGGAGTACACTCTGCAGCAGTTTGGCGAAATGGCTGATCAATTCAAGAGCGATTATTTCAACATGCCCGTACACATGGTGCCGACATCACTGGTAGAGAAAGAGTTTTGGCGAATCGTATCTTCCATTGACGAGGATGTAACAGTGGAATACGGTGCTGATTTGCACACAATGGACCATGGTTCTGGATTCCCAACCAAAACAAGCGTCAACTTGTTCACGTGCGATCAAGAATATGCGGAATCCTCCTGGAATCTGAACAACTTGCCAGTATTACGCGGCAGTGTTTTGGGTCACATCAACGCAGATATCAGTGGCATGAAAGTACCGTGGATGTACGTCGGAATGTGCTTCGCAACTTTCTGCTGGCATAACGAGGATCACTGGAGTTACTCAATTAATTACTTACACTGGGGCGAACCAAAGACATGGTACGGCGTACCTGGCGCTCAAGCCGAAAGATTCGAACACTCGATGAAGTCTGCCGCACCGGAACTTTTTCATAGTCAACCAGACCTGTTGCACCAACTCGTCACTATTATGAATCCTAACATCCTAACGAGTGAAGGTGTTCCGGTATTCAGAACTGATCAACATGCCGGTGAATTTGTGGTAACGTTTCCCCGGGCCTATCATGCCGGCTTTAATCAAGGATATAACTTTGCAGAAGCTGTTAACTTTGCACCAGCTGATTGGctGAAAATCGGAAGAGACTGTATTACTCACTATTCAAATTTGAGAAGGTTTTGTGTGTTTTCACATGACGAGCTTGTGTGCAAGATGTCCCTGGATCCAGATTCATTGGACATTGGAATTGCAACTGCCACGTACCATGACATGTTACAGATGGTTGACGACGAGAAAAAGTTGCGGAAAAACTTGCTGGAGTGGgGTGTAACAGAGGCAGAACGCGAGGCATTTGAATTGTTGCCAGATGATGAGAGACAGTGTGAGGCATGCAAGACAACTTGCTTTTTGAGTGCAGTCACATGTTCGTGCCACAGTTCACAGTTGGTTTGTTTGAGACATTTTACTGATCTCTGTGATTGCCCACCAGAGAAACACACATTGAGGTATCGATATACCTTAGACGAGTTACCGATCATGTTGCAAAAACTGAAATTAAAGGCAGAGTCCTTTGACTCATGGGTTACCAAAGTGAAAGAGGCAATGGATCCTAAGAACGATAAGATCGAATTGAGTGAACTAAAGGAACTCCTAAATGAAgcagaaaataagaaatttccAGAAAGTGAATTGCTTACGGCGCTAACAACCGCTGTCCAAGATGCCGAAAAATGTGCAAGTGTTGCACAACAACTTTTGAATAATAAGCAGCGCACaagGACTAGACAATCTGTAGAGACCAAATATAAGTTAACAGTAGAGGAATTGACTCTGTTCTACAAGGAAATAACAAATCTCTGTTGCGAATTAAAAGAATCGGATGGTGTCAAATTCATCCTTGATCAAGTGTTACAGTTTCAGAAGGATGCAGAAGAGTTGGAAGCCAAGCAAGATAATTGTGATGTTGAAAAGTTGGAGAAGTGCATTGATTTTGGTGATTCGATTTGTATTGAATTACCCCAACTCGTAAGGCTGAAACAAAGGTTATCACAAATTCAATGGTTGGATGAAGTGAAAGCTATTCAAGACGATCCAAAATCCATAGGTCGAGAAGACTTAGCAAAGTTAATCGAAAAGGGTATGACAATACCCCCACATTTCAGTATAGAAAGTACACTGTCGGAACTGCAAGCGTTAATGGTGAAAATCGACAAATGGGAGGAGAAAGCAAAGTTATATTTACACACAAAGAATCGGCAAACGATTGCGGCAGTCGAGGAGTTTGTTCGCGAAGCCGACGAAGTTGAAGCGTACCTTCCAAGTCTGGACACGCTTCAAGACATACTAAGCAAAGCGAAGAATTGGACGAAGACCGTGGAAGAGGTTCAGGCGAGAGAAAATTTTCCGTATTACGACACGTTGGATGATCTTGTCCGCAAGGGTAGGAACATTCCACTGCATTTGGACGCTCTTCCCATATTGGAGTCGACTCTCTCACAAGCAAAAGCTTGGAAGGAACGTACGGCGAGGACATTCCTGCGGAAAAATTCACACTACACGTTAATGGAAGCGTTGTCACCACGAATCGGCGTTGGTGTACAGgcaatgaaaacaaaaaagaacAAGGGTGACGAATCCGTGGGAGCTGTTTTCGTATGTGATACGAAGCTGGACGACTCCAACGATTCCGCTAACGTAGTCGCTGCTTTCAAATTAGCCGAACAGCGGGAGATGGAGGCAATGCGAAATTTGAGAGAACGAAACCTGATTAAGGCAGAAGTGGATGACTCACGATACTGTGTATGTCGACGCCCAAGGTTTGGCCTTATGCTTCAATGCGAGCTCTGCAAAGATTGGTTCCATTCAAGTTGTGTGCCGCTGCCGAAGACTACGTACAAGGGTAAAATTCCGCTGTCACGGGAAATAAAGTTCTTGTGCCCTTGTTGCCTACGTTCACGTCGTCCACGGTTAGAAACTATCCTGGCATTGTTGGTGAGCCTTCAGAAAATTCCTATTCGTCTACCAGAAGGGGAGGCGCTGCAGTGTCTTACTGAAAGAGCAATGAATTGGCAGGATCGAGCGCGGCAGGCATTGGCCACAGATGAAATTTCGTCTGCACTGGCAAAGTTGTCCGTACTTTCTCAGAAGTTAGTAGAGGCAGCTGCCAGGGAGAAGACGGAAAAGATTATAAGCAGCGAGCTGAAGAAGGCAGCGAACAATCCTGAGCTGCATCAAAGAGTACAAGCTATTGCACCACTCAGTGGCGTCCACTCGGATGACAGCATGCTTAGCACAGCTgacgatgacgacgatgtgGTGACCATAGACGACGACGAACCGTCATGTAGTACgtttaataacagcgaacatgCATATTCTTACATTTCCAAACTTCAGCGGAAGTCACAATCAAATGATTCGACCGAGGCTGCAGTTGCTTTATCGCAATCAGCAAGACTGCGACTAGAAGAACTAATGATGGAGGGCGACCTACTAGAGGTTGCTTTGGACGAAACACAACATATATGGCGTATTTTGAGCCACACGAACAATCCGAGCACTGTTCGAAAATACGCAGCTTTCGAAGAAGTTCAGTCGAACTACAATCAAGACATCAAAGACGTAAAGAAAcgaggaagaaaaaggaaatcTGAGGAATTCGAGCTGCTGAAAAAACTCGGGCGACAAAAGGTTGACGAGAAGACTTTGATGAAGCGCAAAGGATTGCCAAAAGACAAGAAGCCTGTCAGCTCGCCCGTGCCGATGAAGCGGGGGCCACGGAAGATGAAGCGCAAAGAAGGAGAGGAGGTTCCCAGGAAGAGAGGTGGCAATcggaaaaaaacaaaacaagacACTTCGGATGAAGAGGACGATTGTGCCGCAGTCAGTTGTCTACGTCCTAGTGGCAGGGAAGTTGATTGGGTTCAGTGCGATGGTGGTTGCGAAGGTTGGTTCCACATGCATTGCGTCGGTTTGGACCGAACAGAAATCGCCGAGGAGGATGACTACATTTGTGTCAATTGCAAAGATACGGATCAAAATATTACGTCGACTGCGCCAGACCCGCTGGCTGAATCGTTAGGCCTGGATGCACTTCTTTCCCTTTCTCAGTCCCAGGGATACCAAGGTACGACGGATGCGGAAGCAGAAATCCAGGACACGTCGTCATTCGTCAGGACCTACTAG
Protein Sequence
MVSRFDTDFDYEDRFGVYRRAQDMACDRGDSDFEFAIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPESDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDSIIKGKCLDPDKDNSKELKKLQFYGAGPKMAGFNTKDAKKANKTRGVKLVYEFDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIELSELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEELEAKQDNCDVEKLEKCIDFGDSICIELPQLVRLKQRLSQIQWLDEVKAIQDDPKSIGREDLAKLIEKGMTIPPHFSIESTLSELQALMVKIDKWEEKAKLYLHTKNRQTIAAVEEFVREADEVEAYLPSLDTLQDILSKAKNWTKTVEEVQARENFPYYDTLDDLVRKGRNIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESVGAVFVCDTKLDDSNDSANVVAAFKLAEQREMEAMRNLRERNLIKAEVDDSRYCVCRRPRFGLMLQCELCKDWFHSSCVPLPKTTYKGKIPLSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSMLSTADDDDDVVTIDDDEPSCSTFNNSEHAYSYISKLQRKSQSNDSTEAAVALSQSARLRLEELMMEGDLLEVALDETQHIWRILSHTNNPSTVRKYAAFEEVQSNYNQDIKDVKKRGRKRKSEEFELLKKLGRQKVDEKTLMKRKGLPKDKKPVSSPVPMKRGPRKMKRKEGEEVPRKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICVNCKDTDQNITSTAPDPLAESLGLDALLSLSQSQGYQGTTDAEAEIQDTSSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
-