Basic Information

Insect: Cryptocephalus primarius
Gene Symbol: stc
Assembly: GCA_963576515.1
Location: OY754942.1:11395526-11401174[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9 2e+04 -4.1 1.6 15 19 328 332 327 332 0.81

2 14 1 1e+04 -3.2 0.2 4 10 361 367 361 367 0.87

3 14 9e-07 0.0092 16.2 12.2 4 18 376 390 374 391 0.95

4 14 5.6e-08 0.00058 20.0 8.3 1 19 427 445 427 445 0.97

5 14 4.2e-10 4.3e-06 26.8 15.2 1 19 485 503 485 503 0.99

6 14 0.85 8.7e+03 -2.9 0.7 5 10 532 537 532 537 0.94

7 14 6.2e-07 0.0063 16.7 13.4 4 19 550 565 543 565 0.86

8 14 1.3 1.3e+04 -3.5 2.0 5 10 594 599 594 599 0.93

9 14 0.045 4.6e+02 1.2 12.8 1 11 605 615 605 627 0.90

10 14 7.9e-10 8.1e-06 25.9 12.4 1 18 632 649 632 650 0.99

11 14 1.3 1.3e+04 -3.5 1.4 6 10 679 683 678 684 0.54

12 14 0.00089 9.1 6.6 13.7 1 19 689 706 689 706 0.85

13 14 2.8e-07 0.0029 17.8 20.8 1 19 742 761 742 764 0.97

14 14 0.028 2.8e+02 1.8 17.0 1 18 771 789 771 790 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9	2e+04	-4.1	1.6	15	19	328	332	327	332	0.81
2	14	1	1e+04	-3.2	0.2	4	10	361	367	361	367	0.87
3	14	9e-07	0.0092	16.2	12.2	4	18	376	390	374	391	0.95
4	14	5.6e-08	0.00058	20.0	8.3	1	19	427	445	427	445	0.97
5	14	4.2e-10	4.3e-06	26.8	15.2	1	19	485	503	485	503	0.99
6	14	0.85	8.7e+03	-2.9	0.7	5	10	532	537	532	537	0.94
7	14	6.2e-07	0.0063	16.7	13.4	4	19	550	565	543	565	0.86
8	14	1.3	1.3e+04	-3.5	2.0	5	10	594	599	594	599	0.93
9	14	0.045	4.6e+02	1.2	12.8	1	11	605	615	605	627	0.90
10	14	7.9e-10	8.1e-06	25.9	12.4	1	18	632	649	632	650	0.99
11	14	1.3	1.3e+04	-3.5	1.4	6	10	679	683	678	684	0.54
12	14	0.00089	9.1	6.6	13.7	1	19	689	706	689	706	0.85
13	14	2.8e-07	0.0029	17.8	20.8	1	19	742	761	742	764	0.97
14	14	0.028	2.8e+02	1.8	17.0	1	18	771	789	771	790	0.89

Sequence Information

Coding Sequence: ATGGCATATTTCAACGATCCTTCGAACTTCTACGTGAACTCTGAGGTGTACGAGAACACCGATTATTACGAGAACAACGCATCTAGCTACCCCACTTATAACCAGCGAGGGGCTGGTACCAGCAGGGACATAACATTCTCCACCCTGGAGCCAACCGCACAGGAATTCCAACCTGCGAGCAGTTCGAACCAGAACAATGGGGCCATTAAGAAGAAGCCGCAGCAGTACCCCAGGCAGGGACGGTACGGAAGCGGAAGGATTTTCAAGAAGGATTCCAGAGCTGAGTATAGTAGCAAGTACTTTGTGCCAAATGAGGAATCGAAGGATCTGGCGAATGCTGAGAGTTACTTTGAAACTAATGATTTGAACTTTGAAGATTATAAGACCAAACCACCGCAGGAAAATCATTCCCAATCGTATGACAATTCTAACAAGCATAGGAACTACAAACTTGATCGAAACAAAGGTAGCTATTACAAACCGTCATTGGAAAGATCCCACAATTCGTATGACAAACCAAGAAGGCAAAACAACTACAACAGAACTAATTATTATGAGAAAAATAACTACTCCGATAACAGAAATAACTCCAACTATTATGAGAAATCCAACTATTCTGTTAATAGAAACAGTCGTGATAATTATAGAAGCAATAACTTTGAAAAATCGGATGGAAGTAGATCCGAGGAGTCCAAGGACTTCAAATATAGAAATGTCAAACCTACTGTTAAGGACTGGAGGAGCAAGCAGAATTTTGATAAGGAGAGATTCAAAGCTGCAGAATCAAAAAAGAAATTAGCTGCTTCCCACAGAGAAAGGCTAGAAGAGATGATCAACTGTCGCCTCTTGGAGTGCCTCGTCTGCtgtgagaaaataaaaaacacagaCAAGGCTTGGTCATGCATTCTTTGCTACCACATATTCCACTTGGGTTGCGTGACCGCCTGGGCTGAGTCCTCGAAAATTGAGAAGGGCTGGCGCTGCCCGGCCTGCCAGAATGTCTATGAGGATGTACCGAAACAGTATAAGTGTTATTGTGGGAAAATGGCCGAACCGAAGTATGACCCAGGTACCATTCCACACAGTTGCGGCGACATGTGCTTGAGAAAGGGACGCACTTGCGATCACAGGTGCTCCTTGCTCTGCCATCCGGGGCCCTGCCCGGAATGTATTGTAATGGTCTCAAAGCCTTGTGGTTGTGGCAGCACCAGTCCTATGGTCAAATGCAGCACCAACATCGAGATTGTCTGCGAGAATATCTGCAATAAAACACTGGAGTGCGGCATTCATAAATGCACCATCACCTGTCACATGGGGGACTGCGACCTTTGCAAGGAAGTGATAAAGCAGGAGTGTTTCTGTGGTAAAGTAGGTAGGAAGGTCCCTTGCAGGGCTGAGTACAGCGGTAAGACGAGTTATGGATGTGGCGAGGTATGTGGAAAGATGTTGTCTTGCGGGAACCACAAGTGCAGCAAGCTATGCCACGAAGGACCTTGCGAGACTTGCCCTAGAGATGTTGAGAAGATTTCTACTTGTCCTTGTGGAAAGACTGCCCTCACCGAACCTAGGAAAACTTGCTTAGATCCCATTCCAACTTGTGATAAGATATGCAGAAAGGTGTTAAAATGTGGACAGCCAAGCTCCCCTCATCTATGTAAGGAGCTTTGCCACGAGGGAGAGTGCCCCCCTTGTTCTTCTACCACATTCGTGAGATGTAGATGTGGACACATGGATAAGGAAATACCGTGTGAAAAGTTAACTACTAAAGCTGATGATGCTAGATGTGAGAAGAAATGCACCAAAAAAAGACAATGTGGGAAACACAAATGCAACCAGCGTTGCTGCATTGATATAGAACATATGTGTCCTCTCCCATGCAATCACCTCCTCTCCTGCGGTCAACACCGATGCGAGCGTACATGCCACTGGGGACGGTGCCCCCCCTGTATTGAGACAAGTTTCGAGGAGTTGTACTGTGAATGTGGCAACAGCATTATCTACCCACCTGTCCCGTGCGGTACTAAGCCGCCGAACTGTGATAAGCCATGCCCCAGGCCTAAGCTGTGTGGCCACAGTGTCAACCACAACTGCCACACGGGGCCGTGCCCCCCATGCACGGTCCTATGCAAGAGATGGTGTTATGGAGGTCACGAGCAACGGTCTGCGATTCCATGCCACCAGGAGAAGTTCAGCTGTGGCCTGCCTTGCGGTAAAGGTATGCCGTGTGGTAGACACAAGTGTAACAAGCCTTGCCACGGAGGTCCGTGTCCGTTGCCTTGTAAACAACCATGTACTGTTCCCAGGATGTTATGCGGTCACCCTTGTGGGAAACCTTGCCACGACCCACCATGCCCCGAAAGTAACTGCAAACACAGTATGCAGGTGTCATGTTCCTGTGGATTGCAGAAGAGCATGAGAACTTGTCTGGAGGTAACTGATGAGTTTAAGAACATACAGATGGCTCAAATGAAGGAGAAAATGGGATCCTTCTCTAAAGATCAGACAGTGGATATAACTGATCTTGTAACCAATGTCAAGAGACCATCAGTTTTAAAGATtttGGATTGTACGGAAGAGTGCAGAGTATTAGAAAGAAACCGTCGATTGGCTATAGGCTTGCAAATCGTCAACCCGGACATCAGCCAAAAGCTAACGCCGAGATACAGCGACTTCATGAGGGGCTGGGCGAAAAAGGACCCGATGTTCTGCCAACGGATCCATGACAAACTATCTGAGCTGGTACAATTAGCTAAACAGAGCAAACAGAAAAGTCGCGCTCACTCCTTTGAATCGATGAACAGAGACAAGAGGCACTTCATACATGAGTACTGTGAACATTTCGGAGTGGAGAGCGAGGCCTATGACGCGGAACCCAACAGAAACGTCGTCGCCACTGCCATTAAGGATAAGTCCTGGTTGCCTAGCATGAGCCTGATGGAAGTAATTCAGAGGGAAAATGGACAGCGGAAGGTGCCCGGACCGGTCTCTATGGGCAGGAGCACCCTCGGAAAGTCGGAGACTGTGTCGTTGAAATTACCATGCCGCATTCAGAAGACAAATACTCCACCTGGGGAGCTTATTGATTATTTCGATTCACCTCCATAA
Protein Sequence: MAYFNDPSNFYVNSEVYENTDYYENNASSYPTYNQRGAGTSRDITFSTLEPTAQEFQPASSSNQNNGAIKKKPQQYPRQGRYGSGRIFKKDSRAEYSSKYFVPNEESKDLANAESYFETNDLNFEDYKTKPPQENHSQSYDNSNKHRNYKLDRNKGSYYKPSLERSHNSYDKPRRQNNYNRTNYYEKNNYSDNRNNSNYYEKSNYSVNRNSRDNYRSNNFEKSDGSRSEESKDFKYRNVKPTVKDWRSKQNFDKERFKAAESKKKLAASHRERLEEMINCRLLECLVCCEKIKNTDKAWSCILCYHIFHLGCVTAWAESSKIEKGWRCPACQNVYEDVPKQYKCYCGKMAEPKYDPGTIPHSCGDMCLRKGRTCDHRCSLLCHPGPCPECIVMVSKPCGCGSTSPMVKCSTNIEIVCENICNKTLECGIHKCTITCHMGDCDLCKEVIKQECFCGKVGRKVPCRAEYSGKTSYGCGEVCGKMLSCGNHKCSKLCHEGPCETCPRDVEKISTCPCGKTALTEPRKTCLDPIPTCDKICRKVLKCGQPSSPHLCKELCHEGECPPCSSTTFVRCRCGHMDKEIPCEKLTTKADDARCEKKCTKKRQCGKHKCNQRCCIDIEHMCPLPCNHLLSCGQHRCERTCHWGRCPPCIETSFEELYCECGNSIIYPPVPCGTKPPNCDKPCPRPKLCGHSVNHNCHTGPCPPCTVLCKRWCYGGHEQRSAIPCHQEKFSCGLPCGKGMPCGRHKCNKPCHGGPCPLPCKQPCTVPRMLCGHPCGKPCHDPPCPESNCKHSMQVSCSCGLQKSMRTCLEVTDEFKNIQMAQMKEKMGSFSKDQTVDITDLVTNVKRPSVLKILDCTEECRVLERNRRLAIGLQIVNPDISQKLTPRYSDFMRGWAKKDPMFCQRIHDKLSELVQLAKQSKQKSRAHSFESMNRDKRHFIHEYCEHFGVESEAYDAEPNRNVVATAIKDKSWLPSMSLMEVIQRENGQRKVPGPVSMGRSTLGKSETVSLKLPCRIQKTNTPPGELIDYFDSPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392440;
90% Identity: iTF_00392440;
80% Identity: -