Cpri018691.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- ZBTB41_1
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:4943425-4946099[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3.8e-06 0.00022 21.7 4.2 1 23 78 100 78 100 0.98 2 19 0.00011 0.0066 17.0 0.6 1 23 106 128 106 128 0.96 3 19 0.00062 0.036 14.7 5.1 1 23 133 156 133 156 0.98 4 19 3.3e-05 0.0019 18.7 0.1 2 23 170 191 169 191 0.96 5 19 0.01 0.58 10.9 0.1 1 23 197 220 197 220 0.88 6 19 0.0029 0.17 12.6 0.1 1 23 228 250 228 250 0.96 7 19 2.5e-06 0.00015 22.2 0.1 1 23 256 278 256 278 0.98 8 19 0.00021 0.012 16.2 0.3 2 23 285 306 284 306 0.93 9 19 9.6e-06 0.00055 20.4 2.5 1 23 312 334 312 334 0.97 10 19 0.00063 0.037 14.7 0.6 1 20 358 377 358 380 0.91 11 19 9.2e-06 0.00053 20.5 0.7 1 23 386 409 386 409 0.95 12 19 0.076 4.4 8.1 1.0 2 23 421 442 420 442 0.97 13 19 0.14 8.2 7.3 0.1 2 23 449 471 449 471 0.89 14 19 6.4e-05 0.0037 17.8 0.8 1 23 476 498 476 498 0.97 15 19 0.024 1.4 9.7 4.5 1 23 508 531 508 531 0.93 16 19 3.4e-05 0.002 18.7 0.1 1 23 538 560 538 560 0.98 17 19 4e-06 0.00023 21.6 1.4 2 23 567 588 566 588 0.97 18 19 6.5e-06 0.00038 20.9 2.2 1 23 594 616 594 616 0.96 19 19 0.0009 0.052 14.2 2.1 1 23 622 645 622 645 0.97
Sequence Information
- Coding Sequence
- ATGGTGATTTCTCCTACCGACTCGCTGCACGAGCTCCTCGACCTCCTCGACGGCGAGTGTTTCCTCCAGAACATCCACCTGCCGGAGATCGAGGAGCAGCTCTTCCAGAAGGGGCCGCAGCCGAAGGCGGCGACGCCGCCGCCCGATCCCCCCGCGACGACCTCGTGCATGTTCCAGGACCCGGCCGGCGTCTTCGGCGAGGGGGCGCGGCCGCCCGTCGATCCCGACGCCTTCACGTGCGACCTCTGCTCGAAATCGTTCCGCACGCGCAAGTACCTCAAGAAGCACCTGTCGACCCACGCGCCCGCGCGCGGCTTCGCCTGCGCCGCGTGCGGCAAGTCCTTCCGCCTGCGCTACAAGCTGACCGAGCACGAGAGGACGCACGCGGCGCCGCAGTTCCAGTGCGACGCCTGCTCGGCGATGTTCCGCCACCGCTCGCACCTCAACGCGCACAAGCGGAAGCGCCACGACGCCGTCGAGCCGCGCGCGGCTCCGCGCCCCCCGCTCGTCTGCGAGCTCTGCGGCAAGACGCTCGCCAGCCCCTCGTCGCTGAAGGAGCACCGGACGACTCACGCGCGCGGCGCGCCGCACGCGTGCGCCTCGTGCGGCCGCGCGTACTCGTCTGCGCGCGGGCTGCGCAACCACGAGGCGCTCGCGCACGCGCCCGGGCGCGCGCGCCGCCACGCGTGCCGCGTGTGCGGCAAGTCGGTGAGCGGCCGGGCGGTGCTCGAGGTGCACCTGCGGCTGCACACCGGCGAGCGGCCGTACGCGTGCGCCGAGTGCGGGCGCGCGTTCGCCTCGCAGGAGTACCTGCGCAGCCACGAGCGGACgcacacgggcgagaagccgCACGCGTGCGTCGCGTGCGGCAAGCGGTTCGCGCAGCGCACCGCGCTGAAGGTGCACGTGCGCGGCCACACCGGCGAGAAGCCGCACGTGTGCGGCGCGTGCGGCAGGGGCTTCGCGACCAAGAGCCACCTGATGACGCACTACAGGACGCACGacagcggcggcggcgtcgaCATCGAGTACATCTCGAGGGGCTTCGTCGCGGCGCACGTACCGCCTCGCTTCCGCTGCGACCAGTGCTTCAAGGCGTTCGTCAGCGCGCGCAAGCTGCGCAAGCACGGCGTCGCGCACGACGCCTCGCGGCCGTTCGCGTGCGACTCGTGCCCGAAGCGCTTCAAGCGCAAGTACGACCTGTCCGCGCACCGGAGGGGCGTCCACGAGGCCGcgcgcggcggcggcggcggctgcgTCGAGTGCGCCGTCTGCGCGAAGCGCCTCAAGTCGAAGAGCTCGCACGCGGTCCACATGAGGCGGCACACGGGCGAGTACGCGGAGCGCTGCGAGCCGTGCGGCAGGGGCTTCGTCACGAGGCAGGAGTACGTCAACCACGTCGGCTCGAGGCACGGCGGCGGCGCGCACGTGTGCGACGTCTGCGGCCGCAGCTGCTACGACAAGGCCGCGCTCCAGGGCCACATGGCGCGCCACGAGGACGGCTACGCCTCGAACCCGACGCACCGGTGCGAGCACTGCTCGAAGACGTTCCTGCGCGAGAAGTACCTGCGGCAGCACGTCGTGCGCATCCACAAGGACGGCGGGCAGCGCTACATCTGCGACGTGTGCGGCAAGGACCTGCGCTCGAAGGGCAGCCTCAGGGACCACATCCTCGTCCACAGGGGCCTCAAGCCGCTGCCGTGCCCGAAGTGCGGCCGGTGTTTCGCGCTGCGCAGCACGCTTAAATcgcacgcgcgcacgcacacCGGCGAGCGGCCGCACGCGTGCCACGTGTGCGGCAAGCGGTTCAGCCAGCGCGGCCCCCTCAAGGTACACATGTTGTACCACACGGGCGAGAGGCCGCACAAGTGCGACATATGCTCGAGGGGGTTCGTCACGAGGAACCTCATGAGCAACCACGTCAGGAGGCAACATGGCGGCGTATAA
- Protein Sequence
- MVISPTDSLHELLDLLDGECFLQNIHLPEIEEQLFQKGPQPKAATPPPDPPATTSCMFQDPAGVFGEGARPPVDPDAFTCDLCSKSFRTRKYLKKHLSTHAPARGFACAACGKSFRLRYKLTEHERTHAAPQFQCDACSAMFRHRSHLNAHKRKRHDAVEPRAAPRPPLVCELCGKTLASPSSLKEHRTTHARGAPHACASCGRAYSSARGLRNHEALAHAPGRARRHACRVCGKSVSGRAVLEVHLRLHTGERPYACAECGRAFASQEYLRSHERTHTGEKPHACVACGKRFAQRTALKVHVRGHTGEKPHVCGACGRGFATKSHLMTHYRTHDSGGGVDIEYISRGFVAAHVPPRFRCDQCFKAFVSARKLRKHGVAHDASRPFACDSCPKRFKRKYDLSAHRRGVHEAARGGGGGCVECAVCAKRLKSKSSHAVHMRRHTGEYAERCEPCGRGFVTRQEYVNHVGSRHGGGAHVCDVCGRSCYDKAALQGHMARHEDGYASNPTHRCEHCSKTFLREKYLRQHVVRIHKDGGQRYICDVCGKDLRSKGSLRDHILVHRGLKPLPCPKCGRCFALRSTLKSHARTHTGERPHACHVCGKRFSQRGPLKVHMLYHTGERPHKCDICSRGFVTRNLMSNHVRRQHGGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -