Cpri018489.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- -
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:3825777-3826999[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.14 1.3e+02 2.8 0.6 15 37 108 127 105 132 0.75 2 9 0.043 40 4.5 0.7 5 40 127 158 123 161 0.76 3 9 0.18 1.7e+02 2.6 0.4 3 40 153 186 151 189 0.80 4 9 0.0019 1.8 8.8 2.5 10 39 188 213 180 217 0.80 5 9 0.012 11 6.3 0.9 17 35 222 237 217 244 0.78 6 9 0.05 46 4.3 4.0 5 40 239 270 236 273 0.79 7 9 0.012 11 6.3 0.3 17 39 278 297 271 300 0.88 8 9 0.00012 0.12 12.7 1.8 1 40 291 326 291 329 0.91 9 9 0.56 5.2e+02 0.9 7.7 5 39 323 353 321 385 0.74
Sequence Information
- Coding Sequence
- ATGGGCGATTCTACTTGCGACTGGTGCTTAAAGGAGGAGCCGGTGCAGACGATCCGGGAGAGGTTATGGCGCTCCTGGGAAGTgatcagcgcagagGATCCGATCTTGGCGTCCCATAGGAATATCTGCGACGGATGTGAGTCGCACTGCGAGGACTTCTCGGCGCGTATCGAGACGTGGAAGGCCCACGCTTCTACGGTGGATGGAATACTGGGACGGGAACCGTCGATCGGTGCCCAGCACCATCCGGTGATCGAGGGGGGAGTTTTAACGGAGGACGAGGCCGGCTCGAGTAATTCCACATCCGGCGTCGGTCGTACGAGCAAAAACTCATGCCCGACGTGTAAGAAGACTTTTACTCGACCCGTCGCTTTGAAAAATCACATTCGAGTCCACACGGGTGAAAAGCCTTTCAGATGTTCCGTTTGCGGCAAGGCTTTCGCTTGGTCCGAAGTGCTGAAGAGTCACATGCGCTTCCATACGGGCGAGAAACCTTTCGAATGTCCCGTCTGTGATAAGGCTTTCGCTTGGTCCGGCGTTTTCAAACGGCACATGCGCGTTCACACGGGCGAAGAGCTTTTCAAGTGTTCcgtctgtaataagaattttaccgAATCGAGCAGTTTGAAGAGGCACTTGCTGCTTCACACGGGCGGAAAGCTGTTCAAGTGTTCCGTCTGCGGTAAGAACTTCAGCGAATCGGGTAGTTTGAAGAGGCACACGCGTCTTCACACGGGCGAAAAGCTCTTCGAGTGTTCCGTTTGTACCAGGACTTTTACTCGGTCCGGGCAGTTGAAGAGGCACATGTGCCGTCATACCGGCGAGAAGCCTTTCAAATGTCCCACCTGCGATAAGGACTTCAGTGATAATAGCAATTTGAAACGGCACATGTGCCTTCATACGAAAGAAAAGCTTCTTAGGTGCCCCATTTGTAATAAGGATTTCGCCGAGTCCGGCGGCTTGAAGAGGCACATGCGTATTCATACCGGAGAGAAGCCGTACCGATGTTCCATCTGCAGTAAGAGTTTCACCGAGTCCGGTAGCTTGAAACGGCACATGCACCTTCACACAGgagaaaagccatttaaatgtcCCGTCTGTactaagacttttactcagtcagGTGGTTTGAAAGTGCACATGCGGGTTCATAGAAGCGAAAAGCCTTTTTAA
- Protein Sequence
- MGDSTCDWCLKEEPVQTIRERLWRSWEVISAEDPILASHRNICDGCESHCEDFSARIETWKAHASTVDGILGREPSIGAQHHPVIEGGVLTEDEAGSSNSTSGVGRTSKNSCPTCKKTFTRPVALKNHIRVHTGEKPFRCSVCGKAFAWSEVLKSHMRFHTGEKPFECPVCDKAFAWSGVFKRHMRVHTGEELFKCSVCNKNFTESSSLKRHLLLHTGGKLFKCSVCGKNFSESGSLKRHTRLHTGEKLFECSVCTRTFTRSGQLKRHMCRHTGEKPFKCPTCDKDFSDNSNLKRHMCLHTKEKLLRCPICNKDFAESGGLKRHMRIHTGEKPYRCSICSKSFTESGSLKRHMHLHTGEKPFKCPVCTKTFTQSGGLKVHMRVHRSEKPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392939;
- 90% Identity
- iTF_00392939;
- 80% Identity
- iTF_00392939;