Cpri018482.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- -
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:3765011-3766293[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.98 9.1e+02 0.2 0.2 3 26 22 50 21 52 0.76 2 12 0.00071 0.67 10.2 0.7 18 40 93 112 87 115 0.91 3 12 0.44 4.1e+02 1.3 0.3 17 29 120 132 112 142 0.77 4 12 6 5.6e+03 -2.3 0.1 8 29 140 160 134 172 0.65 5 12 0.033 30 4.9 1.6 13 39 172 195 165 198 0.76 6 12 2.4e-05 0.023 14.9 1.9 2 40 190 223 189 225 0.93 7 12 0.00041 0.38 11.0 2.3 3 40 218 251 217 254 0.90 8 12 0.14 1.3e+02 2.9 0.4 14 38 256 277 251 282 0.80 9 12 0.077 72 3.7 1.7 3 33 274 300 272 307 0.71 10 12 0.031 28 5.0 0.4 3 38 302 333 301 338 0.87 11 12 0.029 27 5.1 1.8 2 39 329 362 328 365 0.78 12 12 0.00075 0.7 10.1 0.2 3 40 358 391 356 393 0.87
Sequence Information
- Coding Sequence
- ATGAACGCAACGATCTGCGATTGGTGCATGAGAGAAGCACCGGTGCAAATCATCGAAGGGAACTTGTGGcgcttttggaaaataatcagcGCAGAGGACCCGCTTGTAATATCCCACAGGAATATTTGCAAGAGGTGTGAATCACGCTACGAGGAATTCTACACGTACATCGAAAAGTGTAAGCTCCACGCATCCGTAATACAGGAGATAGAATGTCGGAGCATCGAAGAAGAATCCTGGAATCCCCCCGGAGTCCATAGCGGTGACGGACCTTTCGAATGTCAATCTTGTCGTAAGGCTTTTACTCGTTCTACCGGTttaaaaacgcacatgcgccttcatacgggcgaaaagccttttaaatgctcaCTTTGCGATAAGGCCTTTAATCAGTACGGCAGTTTGAAACGGCACACGTACACccatacgggcgagaagcctCTTAAATGCCCGTCGTGCGATAGAGCTTTCCGTCAGTCCAGAGATCTGGAAACGCACGTGCGCCTCCACACGGGTGAAAAGCCTTTCAAGTGTTCGCTTTGTAACGAGACTTTTCGCAGTTCCGGTAATCTGAAGAGTCACGTGCACGTCCATACCGACGGAAAGTTCAAATGTCCcgtctgtaataagacttttaataGTACCGGTCGTTTGAAGAGGCACGTGCGTATTCACACCGGCGAgaaacctttcaaatgttcaTCATGCGGTAAAGCGTATCGTCGGTCTACGGATCTGAAGAAGCACATGCGCGTTCACACGAGCGAAAAGCCTTTCAAGTGTCCCGTCTGTAACGGCACGTTCAATAGTTCCGCTAACTTGAAGAGTCACACGCGTCTTCATACGGGCGAGAGGCCTTTCAAATGTTCCGTTTGTGGCAAGGCTTTCAATCAGTCGGGCGTGTTGAAAAGGCACGTGCATATCCATACCGGCGAAAAGCCTTTCAAGTGTCCCGTCTGTGACGGCACGTTCAGTAGTTCCGCTAACTTGAAGAGTCACACGCGTATTCATACGGGCGAGAGGCCTTTCAAATGTTCCGTTTGTGGCAAGGCTTTCAATCAGTCGGGCGTGTTGAAAAGGCACGTGCGTATCCATACCGGCGAAAAGGGTTTTAAGTGTCCCGTTTGCGGCAAGACTTTCGGTCGGTCTGGCGTCTTGAGACGGCACATGCGCATCCATACGGGCGTGAAGCCGTTTGAATGTTCCTAA
- Protein Sequence
- MNATICDWCMREAPVQIIEGNLWRFWKIISAEDPLVISHRNICKRCESRYEEFYTYIEKCKLHASVIQEIECRSIEEESWNPPGVHSGDGPFECQSCRKAFTRSTGLKTHMRLHTGEKPFKCSLCDKAFNQYGSLKRHTYTHTGEKPLKCPSCDRAFRQSRDLETHVRLHTGEKPFKCSLCNETFRSSGNLKSHVHVHTDGKFKCPVCNKTFNSTGRLKRHVRIHTGEKPFKCSSCGKAYRRSTDLKKHMRVHTSEKPFKCPVCNGTFNSSANLKSHTRLHTGERPFKCSVCGKAFNQSGVLKRHVHIHTGEKPFKCPVCDGTFSSSANLKSHTRIHTGERPFKCSVCGKAFNQSGVLKRHVRIHTGEKGFKCPVCGKTFGRSGVLRRHMRIHTGVKPFECS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392931;
- 90% Identity
- iTF_00392931;
- 80% Identity
- iTF_00392931;