Cpri018979.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- ZNF536_1
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:5943930-5945157[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.9 1.8e+03 -0.8 1.8 3 28 26 56 24 77 0.76 2 10 0.051 47 4.3 0.1 14 28 118 132 114 141 0.84 3 10 0.0002 0.18 12.0 0.6 17 40 149 169 134 172 0.84 4 10 3.1e-05 0.029 14.6 1.8 17 40 177 197 170 200 0.89 5 10 0.032 30 4.9 1.0 18 38 206 223 202 227 0.80 6 10 0.14 1.3e+02 2.9 0.2 3 29 220 245 218 256 0.78 7 10 0.015 14 5.9 4.8 14 40 258 281 246 284 0.75 8 10 0.0005 0.46 10.7 0.7 18 40 290 309 285 312 0.86 9 10 0.0002 0.18 12.0 4.3 8 41 309 338 306 339 0.81 10 10 1.3 1.2e+03 -0.2 0.6 19 38 347 363 345 364 0.76
Sequence Information
- Coding Sequence
- ATGAGTACAGATACGAAAGTAACGAcatgcgattggtgcttgcaagaAGGAAAAGTACAAACAATCGAGGAGAGGTTGTGGCACTTCTGGATAATAATCAGCACCGAGAATCCCCCCAAGACATCCCTGAGAAACATTTGCGAGAGGTGTAACTCATGCTACGAGCGCTTTTCGACGTACATCGAAAGGTGCAAGACCAACGAGTTCGTGATCGAGAAGATACATTGCCCCGCACAAGGGATCGTAGACGAATCGTCCATTGCTCTCAAATATCACGCCCCGATCAAGGAAGAAGTCTTGGAAGAGGACGTCGTTCAGGATAAACCTTCCGGGAATGGTGAAACGGAACCCAAAACCGTCCCCACGTGTCCGTACTGTGGTAGGACTTTCGAGTACCCATCGCATTACAAGATCCACCTTCGCATCCACACGGGCGACAGACCTTTCGAATGTTCGTACTGTACTAAGACGTTCGCGCGGTCTAGCGACTTGAAGGCTCACTTGCGCATCCACTTGGGTGACAAACCGTTCAGGTGTTCGTATTGTAACAAGGCCTTCACGAAGTCGACCAATTTGAAAACCCACCTGCGCATTCACACTGGCGACAGGCCGTACGAATGTTCGCACTGCAACAGGACCTTCACGCAGTCCGACAGTTTAAAGGCTCACGTGCGTATCCACACCGGCGACAAACCGTTTCAGTGTCCGCTGTGCACTAAGAGCTTCAGACGGCCCAGCGACCTCAAGACTCATCAGCGTACCCACACCGGCGACAAACCGTTCAGATGTTCACACTGCGACAAGACCTTCGCGCAGTCCTGCAACCTGAACACCCACCTGCGCAACCATTCCGGTAACAAGCCCTTAGAGTGCTCGTACTGCGACAAGACCTATCGTTATTCGAGCGAGTTGAGCAGCCACATGCGGATCCACACGGGCGACAAACCTTTCAAGTGCTCGCACTGCGATAAGGTCTTTTCGCACTCGAGTAATTTGAAGACGCACGTGCGAACGCATACCGGCGAGAGACCGTTCGGCTGTTCCCGTTGCGGGAAACGTTATACGACTTCATATAGATTGAGGCAGCATTCGCAAGTGCACGACGGCGAAGGGGGTAAGGAGGGTAAGGTCGAGGGAGTTGTTGTGATGTGA
- Protein Sequence
- MSTDTKVTTCDWCLQEGKVQTIEERLWHFWIIISTENPPKTSLRNICERCNSCYERFSTYIERCKTNEFVIEKIHCPAQGIVDESSIALKYHAPIKEEVLEEDVVQDKPSGNGETEPKTVPTCPYCGRTFEYPSHYKIHLRIHTGDRPFECSYCTKTFARSSDLKAHLRIHLGDKPFRCSYCNKAFTKSTNLKTHLRIHTGDRPYECSHCNRTFTQSDSLKAHVRIHTGDKPFQCPLCTKSFRRPSDLKTHQRTHTGDKPFRCSHCDKTFAQSCNLNTHLRNHSGNKPLECSYCDKTYRYSSELSSHMRIHTGDKPFKCSHCDKVFSHSSNLKTHVRTHTGERPFGCSRCGKRYTTSYRLRQHSQVHDGEGGKEGKVEGVVVM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392942;
- 90% Identity
- iTF_00392942;
- 80% Identity
- iTF_00392942;