Cpri018457.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- -
- Assembly
- GCA_963576515.1
- Location
- OY754956.1:3578952-3580937[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 1.4e+03 -0.4 0.9 2 24 19 46 18 59 0.72 2 13 0.0098 9.1 6.6 0.3 16 41 132 154 128 156 0.86 3 13 0.12 1.1e+02 3.1 4.0 5 28 150 172 146 183 0.75 4 13 0.0012 1.1 9.5 0.5 6 41 179 210 173 211 0.82 5 13 7.4e-05 0.069 13.4 3.8 12 38 212 235 210 240 0.84 6 13 0.002 1.8 8.8 0.6 14 40 242 265 236 268 0.83 7 13 0.0034 3.2 8.0 0.7 12 40 268 293 261 296 0.85 8 13 0.0026 2.4 8.4 1.4 3 33 288 319 286 323 0.74 9 13 0.004 3.7 7.8 1.3 13 39 325 348 319 353 0.81 10 13 1 9.4e+02 0.1 1.4 14 39 354 376 344 380 0.72 11 13 0.0011 1 9.6 0.2 14 41 382 406 371 408 0.82 12 13 0.011 10 6.4 0.2 18 39 414 432 408 436 0.87 13 13 6.9 6.4e+03 -2.5 0.3 17 24 441 448 433 448 0.77
Sequence Information
- Coding Sequence
- ATGAACACTTGTGATTGGTGCTTACAAGGGGCACCGGTGCAGGAGATCCGGGACAAGTTATGGCGCTTTTGGAAGGTAATTAGTGCCGAGGACCCGATGGTGGAATCTCGCAAGAAGATTTGCAAGAAATGTAAGTTACGCTACGAGAACTTCTCGAATTACATCGAGAGGTGCAAGAGCCACGCGTCCGTGATAGATGAGATATTGTCCGGCAGGCACGTCAAAGACGAACCCTCTATCGATATCGAGTATCGTCCCTTAGTTAAAGAAGAAGGGAGACGGTCGGACCCGCACGTTCCCGCAGTGTCAGGCGGAGCGGTCGTAGAACGCCCGGGCTGTTCGAATCCTCAAGGTAAACGGGTCAAAGTGGACGGGCGTGTAGGTGAAGAGGCGGCTTTTAAATGCTCGTTCTGCAATAGGACTTTTATGGATCCTAGTAGCTTGAGGAGGCACTTACGGAAACATACGGGTGAAAAGCTCTTAAAGTGCTCCTTCTGTAACAAGACTTTCGAACAGGCGAACGTTTTGAAGATTCACATGCGCGAGCATACGggagaaaaaccttttaagtgTTCGCTTTGTGGTAAGGCTTTCGCTGTATCTTACAGGTTGACCAGGCACTTGCAGAGTCATACGGACGAAAAGCGTACTAAGTGTTCCCTCTGTCATAAGACTTTCTCACGGTCTAGTAACTTGGAGAATCACCAGCGTAGCCATACGGGTGAAACGCCTTTTAAATGCTTGCtgtgtaataaggcttttaccgAATCTAGTACTTTGAAGTTTCATATGCGCGTGCATGCACAAAAGGACTTCTTCAAGTGTTCGCTTTGTGATAAGACTTTCGCCGTGTCCAGTCGTTTGAAGGtacacatgcgcattcatacgggagagaaacctttcaaatgttcGTTCTGCGATAAGGCTTTTACTAGATCGAGTAGTTTGAGGACGCACAAGTTCATTCATACTAGTGGAAAGTCTTTCAAATGTTCACTCTGTAACGAGACCTTCGCCCGCTCTATCGGCTTGAAGTACCACATGCTCAATCATACGGGCGAAAAGCCTTTCAAATGTTCGGTTTGTAGTGAGAGTTTTGTGCGGTCCGTTAGCTTGAAAGAGCACATGCACGTCCACAcgggcgaaaagccttttaagtgttcgtTTTGTGGTAAGGCTTTCCCTCGGCCGAACAGCTTGAAGAGGCACTTGCAAAGCCACACGGGCGAGAGGCTCTTCAAGTGTTCCCTTTGCGATAAGGTTTACATTCGGTCGGACGGCTTGAAGGAGCACATGCACGTCCACACGGGCGAAAAGCCTTTCAAATGCTCGCTCTGTAACAGGCTGTAA
- Protein Sequence
- MNTCDWCLQGAPVQEIRDKLWRFWKVISAEDPMVESRKKICKKCKLRYENFSNYIERCKSHASVIDEILSGRHVKDEPSIDIEYRPLVKEEGRRSDPHVPAVSGGAVVERPGCSNPQGKRVKVDGRVGEEAAFKCSFCNRTFMDPSSLRRHLRKHTGEKLLKCSFCNKTFEQANVLKIHMREHTGEKPFKCSLCGKAFAVSYRLTRHLQSHTDEKRTKCSLCHKTFSRSSNLENHQRSHTGETPFKCLLCNKAFTESSTLKFHMRVHAQKDFFKCSLCDKTFAVSSRLKVHMRIHTGEKPFKCSFCDKAFTRSSSLRTHKFIHTSGKSFKCSLCNETFARSIGLKYHMLNHTGEKPFKCSVCSESFVRSVSLKEHMHVHTGEKPFKCSFCGKAFPRPNSLKRHLQSHTGERLFKCSLCDKVYIRSDGLKEHMHVHTGEKPFKCSLCNRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392938;
- 90% Identity
- iTF_00392938;
- 80% Identity
- iTF_00392938;