Cmor010075.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptocephalus moraei
Gene Symbol
-
Assembly
GCA_946251935.1
Location
CAMIUL010000292.1:889173-892231[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 7.8 6.8e+02 1.4 0.2 2 10 5 13 4 16 0.89
2 20 0.24 21 6.1 1.2 1 18 188 205 188 211 0.68
3 20 3.8e-05 0.0033 18.1 1.2 1 23 218 241 218 241 0.98
4 20 0.19 17 6.4 1.2 1 18 249 266 249 272 0.85
5 20 4.3e-05 0.0037 17.9 2.8 1 23 279 302 279 302 0.98
6 20 0.016 1.4 9.8 1.6 2 23 308 329 307 329 0.96
7 20 0.49 42 5.2 0.4 1 23 336 358 336 358 0.95
8 20 0.00017 0.015 16.1 1.0 1 23 390 413 390 413 0.96
9 20 0.64 56 4.8 4.7 1 23 421 443 421 443 0.96
10 20 0.41 35 5.4 3.3 1 23 451 473 451 474 0.94
11 20 0.11 9.2 7.2 1.1 1 23 496 518 496 518 0.97
12 20 0.072 6.3 7.8 0.8 1 23 523 545 523 545 0.96
13 20 0.00027 0.024 15.4 3.4 1 23 550 572 550 572 0.99
14 20 0.028 2.4 9.1 1.4 1 23 579 601 579 601 0.98
15 20 1.3 1.1e+02 3.8 3.1 1 23 606 629 606 629 0.90
16 20 0.47 41 5.2 0.3 1 23 637 659 637 659 0.98
17 20 0.00061 0.052 14.3 0.9 1 23 668 691 668 691 0.96
18 20 0.024 2.1 9.3 1.3 1 23 709 731 709 731 0.96
19 20 0.0006 0.052 14.3 2.5 1 23 737 759 737 759 0.98
20 20 0.0021 0.18 12.6 2.4 2 23 769 791 769 791 0.95

Sequence Information

Coding Sequence
ATGCTGAAAGATGTATGCCGACTCTGCCATCGCACTTTTGGCAAAATTTATGTGGAGACCATCGAGGAAACAAAGAAGGAGGTGATACAAGCGCTCGGTCTTTCTCTGGATTTGTCCAGGACCGCTGAGCCTGTAGCCTGCAATGCCTGCCGGATGAGTCTGGAGGACATGTTCACGTTCAAATCGAAATGCGTCTACATCGAAGACTATTTAACGCCGTTCCTAGAGAAGGAGGGTAAACTAGACCTGAAAACCATCCATCCCCAGATAGTAAACGCAAAGGGAGACACCTTCGAGACGGTTTGTCGGTTATGTTTCGTGGCCACCAACGATGTGATCACGTTAGGCGAGGACGAGAGGAGGATGTTCCTCGAGCTTTTTCCTGAAATCGATTTAATGCAGACGAACTCCGAACTTATTTGTAAGTTATGCCACATGTCCCTCAGCAAATATTTCGAATTTGCCTCGGTATGCACAAAGAATGAAGAAAACATCAACCACTACTTTGAATCATTAAAAAACGCTGAGAAAGTCAACAAATCACTCAAAAGGAAAAAGCTGTTCGAATGCGACGAATGCGACTACAAAACCTATCAAAAAGCCTACTTTCAGAAGATACACATCAAATTACATTCAGACCGAAAGGGACTGTATAAATGTCAAAAGTGCGATTACTCCACGAACACGAAGGCCACATTAGAGTCACACCTAATGAAAGTACACGACGTGTCACTGAAAAAGAAGTACAAATGTGAGAAGTGCGACTACACCACAAACAGCATAACCTATTTGAAAAAGCAGCACATACTGTCCCACCAGTCCACCTACAGAACCTACCAGTGTCCGGAGTGTCCCCTCAAGACGAAATACCATTCCAGCCTGAAAAAGCACATAAGCACGAAGCACTCCGATCAAACCCTTTACTGCTTCAATTGTCCGTTCCAGACGATCCACAAGATATCGTTGGTGAGGCATATGAAGATTCACCAACCTGGCGACAAGTTGTTCGAGTGTGACAAGTGCGACTTCAACACCCTCAATAAGTACGCCATGGTCGTCCATTTGAAAGAACATGGTCTTGAGTACAGTTTCCAATGCGATAAGTGCAGTTTCAAATCGAAACTGCCGATAAGTGGACACGTTTGTCGGGTGAGGAAGAAACGGTCGTACATGTGCGATATATGCGGTAAGAAGTTCAACTCGGGTGACACCTTTAAACTGCACAAATTGAGAGACCATGAGGAAGGGAAGGTGAAGTACCACGAGTGCCCCGACTGCGAGTACCGCACCCTTTACAAAAAACACATTCAGAAACATTACAAGATCCACACCGACCCCGACAAGAACGTGTACAAATGTAATAAGTGCTCGTTGCTAACCTACTCGTCTTTGTATCTCAAAAAACATTTGGTTGAGCACCACCAACTAGATGAGTACTTCGACGCTAACTCATACATCCACATCAAGCACTTCAGCATGAAAACCTTCAAGTGCGCCAAATGCAGTTTCACCAGCGTCAGGGAGAAAACGATGAAGGCTCACGAGAAGGCACACCTCACATTCTCCTTCGTGTGCAAGCTATGCCCTTATCGCACCGACACGGCTAAGAAATTGGACAGCCACAAAGTGAGGCATTTCCCTCCGAGGTTCAAGTGCCCACACTGCGACTACAAATCGAAGGTGAAGTCTGTGATGAGAGTTCACATGCGGAAGCACAATGACCACATCGAGACGTACAAGTGCGCCCATTGCCCCTTCGAGAGCAAATGGAAGATCAGCCTGAAGAACCACATGAACATCCACCTGAAGAAGATGTTCAAGTGCAGGTACTGCGACTTTGAGACCGTGCACAGGAAGAGCCAACGCTCCCACGAGGAGAACGTCCACAGGAAGGACGACCACCCGGATTATAAGTGCGCCTCGTGCGAGTTCACGACCAAAATCAAAGCTTCGATAATCCAACACCAGCTGGTGCATAAGGACCCCTCCGAGTTGAAGATGTTCAAGTGCGAGGAGTGCCCCTTCGAGTCGAAGTACAGGCGCAGCCTGCGCAACCACATCCGAGACATACACATGACGAAAAAGAAAAAAGTCGACCGTTCCGATTCCGAGAACGAGGAGACGTTCGAATGCGCCAAGTGTCCGTTCAAGACTAAGAAAAAGATGTACCTCCTAAGGCACGTCATCCAACACAGGAAGGGCAGGGAATTTAAGTGCGACAAGTGCTCTTTCGCGACCCGGAGGAGGTCTTATCTGAAGGCTCACAACAAGGTCCATAAGGTTTACTCCGAGGAGGAGCTCGCCAAATGCCCTCATTGCGATTTCAAGACCAAGTATGCGAGGAGTCTGAAGAATCATATTAGCAATATACACGAGTCTTGGGAGGTCGTCGAAGAGGAGGGTCACAGGAAAGTGGTGTCGTTGAACGGTTGA
Protein Sequence
MLKDVCRLCHRTFGKIYVETIEETKKEVIQALGLSLDLSRTAEPVACNACRMSLEDMFTFKSKCVYIEDYLTPFLEKEGKLDLKTIHPQIVNAKGDTFETVCRLCFVATNDVITLGEDERRMFLELFPEIDLMQTNSELICKLCHMSLSKYFEFASVCTKNEENINHYFESLKNAEKVNKSLKRKKLFECDECDYKTYQKAYFQKIHIKLHSDRKGLYKCQKCDYSTNTKATLESHLMKVHDVSLKKKYKCEKCDYTTNSITYLKKQHILSHQSTYRTYQCPECPLKTKYHSSLKKHISTKHSDQTLYCFNCPFQTIHKISLVRHMKIHQPGDKLFECDKCDFNTLNKYAMVVHLKEHGLEYSFQCDKCSFKSKLPISGHVCRVRKKRSYMCDICGKKFNSGDTFKLHKLRDHEEGKVKYHECPDCEYRTLYKKHIQKHYKIHTDPDKNVYKCNKCSLLTYSSLYLKKHLVEHHQLDEYFDANSYIHIKHFSMKTFKCAKCSFTSVREKTMKAHEKAHLTFSFVCKLCPYRTDTAKKLDSHKVRHFPPRFKCPHCDYKSKVKSVMRVHMRKHNDHIETYKCAHCPFESKWKISLKNHMNIHLKKMFKCRYCDFETVHRKSQRSHEENVHRKDDHPDYKCASCEFTTKIKASIIQHQLVHKDPSELKMFKCEECPFESKYRRSLRNHIRDIHMTKKKKVDRSDSENEETFECAKCPFKTKKKMYLLRHVIQHRKGREFKCDKCSFATRRRSYLKAHNKVHKVYSEEELAKCPHCDFKTKYARSLKNHISNIHESWEVVEEEGHRKVVSLNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-