Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000042.1:374063-380497[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.1e-05 0.0027 18.4 0.9 1 23 31 54 31 54 0.98

2 16 0.00011 0.0098 16.6 2.6 1 23 63 86 63 86 0.97

3 16 0.23 20 6.2 1.7 3 23 96 116 95 116 0.98

4 16 0.00013 0.012 16.4 2.6 1 23 122 144 122 144 0.97

5 16 0.00011 0.0096 16.6 1.1 1 23 150 172 150 172 0.99

6 16 0.0061 0.53 11.1 0.3 2 23 289 310 288 310 0.96

7 16 0.68 59 4.7 1.6 1 23 317 348 317 348 0.86

8 16 0.013 1.1 10.2 0.3 3 23 357 377 355 378 0.93

9 16 1.4e-06 0.00012 22.6 1.3 1 23 386 409 386 409 0.98

10 16 0.11 9.8 7.2 4.8 1 23 422 444 422 445 0.92

11 16 0.00041 0.036 14.8 0.2 3 23 456 476 455 476 0.99

12 16 4.1e-06 0.00036 21.1 1.2 1 23 482 504 482 504 0.98

13 16 0.00022 0.019 15.7 0.7 1 23 510 532 510 532 0.97

14 16 6.3 5.4e+02 1.7 0.2 1 23 927 949 927 949 0.92

15 16 1.6 1.4e+02 3.5 0.6 2 21 1144 1163 1143 1164 0.92

16 16 0.034 3 8.8 3.4 1 23 1192 1215 1192 1215 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.1e-05	0.0027	18.4	0.9	1	23	31	54	31	54	0.98
2	16	0.00011	0.0098	16.6	2.6	1	23	63	86	63	86	0.97
3	16	0.23	20	6.2	1.7	3	23	96	116	95	116	0.98
4	16	0.00013	0.012	16.4	2.6	1	23	122	144	122	144	0.97
5	16	0.00011	0.0096	16.6	1.1	1	23	150	172	150	172	0.99
6	16	0.0061	0.53	11.1	0.3	2	23	289	310	288	310	0.96
7	16	0.68	59	4.7	1.6	1	23	317	348	317	348	0.86
8	16	0.013	1.1	10.2	0.3	3	23	357	377	355	378	0.93
9	16	1.4e-06	0.00012	22.6	1.3	1	23	386	409	386	409	0.98
10	16	0.11	9.8	7.2	4.8	1	23	422	444	422	445	0.92
11	16	0.00041	0.036	14.8	0.2	3	23	456	476	455	476	0.99
12	16	4.1e-06	0.00036	21.1	1.2	1	23	482	504	482	504	0.98
13	16	0.00022	0.019	15.7	0.7	1	23	510	532	510	532	0.97
14	16	6.3	5.4e+02	1.7	0.2	1	23	927	949	927	949	0.92
15	16	1.6	1.4e+02	3.5	0.6	2	21	1144	1163	1143	1164	0.92
16	16	0.034	3	8.8	3.4	1	23	1192	1215	1192	1215	0.94

Sequence Information

Coding Sequence: ATGTTCTCGTCGAGAGTAAGGTCCGTTGCGTTTTACAGGTCTGTCGAGGCGAGCGAAGAGGACGAAAGGGACGTTACGACGAAGCGGAATTTCCAGTGCGAGCAATGCGGCTTGCGGTTTGGTCGCATGCGGCAGCTGAGGGAGCACCGCAGGACAGCTCACATCGACAAAGCTCGCGGCAGGATCTTCTCCTGCGGCTCCTGCCCGAGGACCTATCGTTTCAGCTCGAGCTTAACCCGCCACAGGAACACGAAACACAGTCGTCCCGAggatagatccgtcttgtgtgaggtgtgcggcaggagactgtcctgcggagacaagctgaggtaccacatgaggatgcacaccggcgaggggacgttcgactgTCCTgtgtgcggccggaagttctcgaaacgcgactacctccgctgccatctgcgcatccacaccggcgaacgtccgttcaagtgcgccgagtgcagcaagaccttctcacagtcggccccctacaattaccacgtgaagacgcacgaggcgaaacgaacacgctcggggagtttAGTCGCGCCGGCCAGAAAACGGGGCCCCGACTCGAAAAATCACCAATTTAAACCAGAGGAGGGTGCTTCGGAGGATCGTCCTAGTCGCCAGGCGAGAAGACGTCCCACCCGCTCCGACTCTCATGAGATTTACGGTCGCGGGAAGCCTCTCCGGAAACGAACGAGAGGACGTCGTCGTGACTCCACCCTTCCTCCGCACGATCCGGACGACCCATCGTCCGCCGCTCTTCCTTCGAGGAGGGAACCCTCCTCCCCGTCCGGGTCCGACACCGTCCCCTCGCTCCTGCTGGTCCGCCTCGCCCACTTCGACGTGCCGTTACGTTGCGAGCGGTGCTCTCGCCCCTTCAACACCAACCTCGACTTGGCGTTGCACTCGCGAGTGCACTCGCCCGACGGCGCGACCTATGCTTGTCACTTGTGCGGCGAGGAGGAGGGAACGCGGGTTGGCGGGAGGAGGAGGCGGAGCCGGACCGCCCTCGAGGCGCACATAAGGTCGCACGAGGGCGTGGCCAGGAAGTGGGCGTGCGGACGGTGCGGCAAGCGGTTCAAGAGGGGAGCGGACGCCGCCGAGCACGTCAGATACCACCACTCCGCCTCGGACCGCCTgccattccagtgcgagacctgcggcaagagcttcccgctctcctcgtcgctccggtcgcaccgacgctccacccaccgccacctggtccgtccccctccggctccggccacctacgattgcaccgtttgcctcaagcggtacgcgacgcacagcggtctccaccggcacaactccgcccaccacaaggagctcggacgcgattggtccgtgttgtgcgacgtgtgcggcaagagcatagccagcctcaataagctcaagtaccacatgagggtgcataccggggagaagccgcacaagtgcgaggtgtgcggacgcggtttcgtcaagaaggagcagctgaggatccacacgcgcgtgcataccggagagaaaccgcacgtctgcgaggtttgcggcaagaggttcgcccagctcgccccctataagtaccacgtgaagactcataccggcgataggccgcacgtctgtggcatttgtaTTACTCCATCGAAAATAATCTCCGACTTGAAGGGAACGCCGAGGGTGGTCCCATCGAAGAGAACTTCCGGATCGAGTCAAGTTTCGACTGCTGCGGAGACGACTCCGCGGTCGAGCCAAACTATAACGTTAACGAAGACTAGTTCCGGTTTGACTCGAATTACGATTAAATCTCCAAACTCCGCTGAAGAGAAAATAGTCTCCAAGTCACGCCAAACGCCGATCACGACTTCGTCGAAGACACGTCCGGAGTCGGACGGAACCCCAAGGATAACAACGATCGCGTCTAACGCGACTCATGACCCGAAAAAAACTTTACCTTCGTCCACTGCGACTCCGGAGTTGAAGCGAACTTTAACGAAGGGGTCGTCGTTAACTTTATCGAAGACAAATTCCAGATCGGATCGAATCCCGATTATAGCTTCAGACTGCGCCGCACAAAAGACGAAGGCGATTTCTGAGACAAAGGCGACTCCGGTATCGGGCCCTACCGTCGGCACTCTAATTTCGCCGAAGATAAATCCAGAAAACCGCTACGCTGTCGCGTCGAGCCCGAATCACGATCCCATCCAAGACGAGCTCGGAATCGGAAGGGACTCCGAGAGCGACCGCTATTTCGATTCCGTCAAAGATTCCTTCAGATTTAAGTCACACGGTGACTGCTCCGAAGACAGCTCCGGAGTCGAGCCGAAGTGGATCGACTGTGAACCGAATCGTGATTACGACTCCGATCTCCGGTGTCCAGAAGGCGGGTGCGGAGTCGGGCCAAACTGCTATTCCGACTTCGTCGAAGAGCCGAACTCCGATCTCGATCTCGTCCGAGACAGCTTCAGATTCGAGTCATGCCGTGACCGCACCGACGACGACGACGACGACTCTGGAGTCGAGAGGAACCGTCGCGGCGGTACGTACGAGTTCGATGTCGAATCGAACCCCTACTGCACAAAGGACGGCCGTACGATTGCCTCAAACAAAAATTACAACTTCATCGAAGACAAGTTCGCAATCTGGGACGATTGCGGTCTCGAGTCACGATCCAGCTTCGACGGTAACAGCTCCGAAATCGACCCGAAGCACTGCCTACATCTGAATTTCAAGGACTCCTCCGAGGCGAAGCTCCACACACCCTCGACGAATTTGAAGTGCCGTTACTTTTGCCAACTCTGCTCGAATTACATGGCGACTTTGAGCGCCCTCGACGTCCACATGGAGAACCACGTGATCTGTAAAATGAAGAAGAAAGAAGAGACGGCAGACTCGAAGCACTCGTGCGACTTTTGCGAGAAGAGCCAGTCGAACACGTCGGTTAAGGAAGACCTCTCGCAGCAACAACGCCTAGTCCACGACATGAAAGCGAAAATGATGAGGAAACTGAGGAGAATAATACCCGAAACCGCGTCTCGTTCGTCTCCTTCCGGAGTCGAGAAGACCGAGGGGGCGAAGGTCGCGCAGCAGGTCATCGCGGACCTCGTGGCCCCCGCCGGGGGTCGCGATAACTCCTTCAGGTTCGACCCGGCGAAACCGTGGAGGCTCTCGCCCGCCCTCTCCATGGAGACGGCACCTTCGGCCGACCTGGACGTCGTCGCCGCGTGGAAGCCGGCCGGGGGGCCCTCGGAGCCCGTGCACCTGGGGAATATCTCCGAACTGTACGAGAACGCAGTGGAACGTACGAAGAGGGCCGGCGGCGTCATCTCGGTGAGGAACATAAAGGAGTTGCTCGAGCCGAAGTCTCCGCCGCCGCCTCCTCAGAGCGGCGAGGTGGACGCGACGAAACCGAAGACTCCGAAGAGGTTGCCGAAGAAGTGCGACTCGTGCTCGGCCGTCTTCGGACGGATGAGGTCGTTCAGGAGCCACGAGCAGAGGAAGAGGAAGTGCTCGTTGTGCGGCTTCATGTGCTGTTGGCTGAGAGATATGAGAGGGCACTACATGGCCGAGCACGGGGCGTATTTCTGTAAGAAGTGCGACTTCACGTGCAAGCGCAGATGGACGATGACCGAGCACGTGAACGAGGCCCATTAG
Protein Sequence: MFSSRVRSVAFYRSVEASEEDERDVTTKRNFQCEQCGLRFGRMRQLREHRRTAHIDKARGRIFSCGSCPRTYRFSSSLTRHRNTKHSRPEDRSVLCEVCGRRLSCGDKLRYHMRMHTGEGTFDCPVCGRKFSKRDYLRCHLRIHTGERPFKCAECSKTFSQSAPYNYHVKTHEAKRTRSGSLVAPARKRGPDSKNHQFKPEEGASEDRPSRQARRRPTRSDSHEIYGRGKPLRKRTRGRRRDSTLPPHDPDDPSSAALPSRREPSSPSGSDTVPSLLLVRLAHFDVPLRCERCSRPFNTNLDLALHSRVHSPDGATYACHLCGEEEGTRVGGRRRRSRTALEAHIRSHEGVARKWACGRCGKRFKRGADAAEHVRYHHSASDRLPFQCETCGKSFPLSSSLRSHRRSTHRHLVRPPPAPATYDCTVCLKRYATHSGLHRHNSAHHKELGRDWSVLCDVCGKSIASLNKLKYHMRVHTGEKPHKCEVCGRGFVKKEQLRIHTRVHTGEKPHVCEVCGKRFAQLAPYKYHVKTHTGDRPHVCGICITPSKIISDLKGTPRVVPSKRTSGSSQVSTAAETTPRSSQTITLTKTSSGLTRITIKSPNSAEEKIVSKSRQTPITTSSKTRPESDGTPRITTIASNATHDPKKTLPSSTATPELKRTLTKGSSLTLSKTNSRSDRIPIIASDCAAQKTKAISETKATPVSGPTVGTLISPKINPENRYAVASSPNHDPIQDELGIGRDSESDRYFDSVKDSFRFKSHGDCSEDSSGVEPKWIDCEPNRDYDSDLRCPEGGCGVGPNCYSDFVEEPNSDLDLVRDSFRFESCRDRTDDDDDDSGVERNRRGGTYEFDVESNPYCTKDGRTIASNKNYNFIEDKFAIWDDCGLESRSSFDGNSSEIDPKHCLHLNFKDSSEAKLHTPSTNLKCRYFCQLCSNYMATLSALDVHMENHVICKMKKKEETADSKHSCDFCEKSQSNTSVKEDLSQQQRLVHDMKAKMMRKLRRIIPETASRSSPSGVEKTEGAKVAQQVIADLVAPAGGRDNSFRFDPAKPWRLSPALSMETAPSADLDVVAAWKPAGGPSEPVHLGNISELYENAVERTKRAGGVISVRNIKELLEPKSPPPPPQSGEVDATKPKTPKRLPKKCDSCSAVFGRMRSFRSHEQRKRKCSLCGFMCCWLRDMRGHYMAEHGAYFCKKCDFTCKRRWTMTEHVNEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00392116;
90% Identity: iTF_00392116;
80% Identity: -