Cmor009832.1
Basic Information
- Insect
- Cryptocephalus moraei
- Gene Symbol
- dnaK
- Assembly
- GCA_946251935.1
- Location
- CAMIUL010000288.1:338085-351445[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4.8 4.2e+02 2.0 0.1 3 13 359 369 358 373 0.82 2 13 1.9e-05 0.0017 19.0 0.1 2 23 516 537 515 537 0.97 3 13 2.5e-07 2.1e-05 25.0 0.8 1 23 543 565 543 565 0.98 4 13 3e-06 0.00026 21.6 3.5 1 23 571 593 571 593 0.98 5 13 2.4e-05 0.0021 18.7 0.7 1 23 599 621 599 621 0.96 6 13 3.8e-06 0.00033 21.3 0.1 2 23 628 649 627 649 0.96 7 13 4.7e-05 0.0041 17.8 2.0 1 23 655 677 655 677 0.95 8 13 3e-06 0.00026 21.6 0.7 1 21 683 703 683 704 0.96 9 13 9.6e-06 0.00083 20.0 0.2 1 23 711 733 711 733 0.97 10 13 1.1e-05 0.00092 19.8 1.7 1 23 739 761 739 761 0.98 11 13 0.0018 0.16 12.8 1.7 3 23 769 789 767 789 0.95 12 13 0.0012 0.11 13.3 0.4 2 23 794 816 793 816 0.96 13 13 1.4e-05 0.0012 19.4 0.1 1 23 822 845 822 845 0.95
Sequence Information
- Coding Sequence
- ATGGCGCCTCCTGTTGGCATAGATCTCGGCACCACATTCTCTTCGATCGCTGTTTACGAGAATGGACAAGGGAACATCATCGGAGATCGACGAGGGAAAAAGTTAATACCTTCCATGGTATATGTTTGTCCAAAAAAGGGAAAGTACTTTGTCGATTCGAAGCGGCTGTTAGAGAGACTATATGACGACGAAGCTGTGCGACTCATCATCGATTCAAAGGAGACGAGCTATTCGCTCGTGAGAGGCGCCGACGACATGGTCGCCTACGAAGTGGAAGTGAACGGGAGTCCTATGCGCATAAAGCCGGAAGAGGTGAGCGGCGAGGTGCTGAGGTATCTCAAGGCGAGCGCAGAGGAATACTTCAACGGCGAAACGGTCACCGAGGCGGTGATTTCGGTACCGGCGTACTTCAGTAACGCTCAGAGGAAGGCGACCGTCGCGGCCGCCACCTCGGCCGGATTGAAGGTTCTGAGGCTGATCACCGAACCGGTCGCCGCCGCTCTGCATTACATCAAGAACAGAAACATCAAGTCCAAGTCGATGGTGTTCGATTGGGGCGGCGGCACTCTCGACGTGTCCTTCATCGACGTAGATGACAAAGCGATCGAAGTGAAGGCCGTCTACGGAGACAGTCGACTCGGTGGAAGGGACATAGACGAAGTTCTGTTTGAACATTTCTACATCAAAGTGACCAGACAACCTCAGAAATTTATTCGCCGGCTGTTGGGAAACTGCGTGAAGTTAAAGGAACACCTCTCCGCCGCTGACGAATTCACTACGGTCCTCGAATTGTACGACGGAGTCGATGACCTGGAGATGCATTTGACGAGGGAGGAATTTAACAAAATGAACGGGAGCATTTTCGAAAGGCTTGCAGACATAGTAAATTACGCTCTTCATGACGTGGGTTTGAATCCGGCTGAGGGAGCGCCCGAGGACATGGAGGAGACAGCTACGAAGTGCGACTGGTGCCTACGAGAGGGGGCACCCTCGAGACCGATCGAGGAGAGATTATGGCGCTTCTGGAAGATAGTCAGCAAAGAAGCCGCGCACGCGCCGTTCGGCAGCAACATCTGCTCTATCTGCGACACCCGCTACGACCGCTTCCGCGACTACATCGAGACGTGCAAGCGCAACGAGTCGATCGTCGCTCGCCTCCTCGCCGGGCCTCACGTCAACTCCGAGCCACACATCGAGGACCACGTCATCGTCAAACCGGAACCGTCCGAGCCGCACATCGAGGACCACGTCATCGTCAAACCGGAACCGTCGTCCGAGCCGCACATCGAGGACGACGACATCGTTAAACCGGAACCGTCCGAGCCGCACATCGAGGACCACGTCATCGTCAAACAGGAACCGTCTGAGGACCACGTCATCGTCAAACCGGAACCGTCCGAGCCGCACATCGAGGACCACGTCATCGTCAAACCGGAACCGTCGTCCGAGCCGCACATCGAGGACCACGACATCGTCAAAACCGAAGCGGCGCGGCCGCTGGAGCTGCGCGTCGTCCTCGTCGATTGCCGGAGACGCCGAACGGTCGagtgtccgcgctgcgcggcgacgttcacgcagccgtcgagtctccgttcgcacctgcgcatccacacgggcgacaggccgtacaagtgcacgcgttgccccaaggcgttcacgcagtcctccgcgctcaacgcccaccgacgcctgcacacgggcgacagaccgttcaagtgttcgcactgcgagaagcgcttcgtcacgtcgtcgagcctccgcgtccactcgcgcatccacacgggcgagaggccgttcgcgtgtccgcactgcgacaagacgttctcggcatcgtcgagcctcgacctccacctgtacatccacagcggcgaaggcggcctcacgtgcgagttgtgcggcaagggtttcacgcgaccggcgggcctcaagtcgcacatggtgatccactcgggcgagaagccgttcgagtgcccgcactgcccgagacgcttcgctttcgcctccaagctgcggaagcactcgtacgtccacaccgacgacaagccgttcgagtgctcgcactgcgacaggcgcttcgcgaccgccgagtacctcaggaagcacctacggatctacacgggcgacaagccgttcaagtgcgcgtcgtgcgacaagagcttcatcaccgccgctctgctcaagcggcacctcgtcgtccacaccggcctcaggccgtaccgctgccagctctgcgacaagacattcacactgctcggcacgctcaaaaaacaccggcagatccacgatggcgtcaagaagtacgggtgcctgcagtgcagccgccggttcttcgactcgtcgcagctgcggcggcactcgaagggacacgtggtgcCGTTGAGGTGCTCGCTGTGCAAGGAGGCGTACTACTCGTTGTCGAGCCTGAAACTGCACCTGGCGACGACGCATCCGCCGGACAGGCCGTTCTCGTGTCCGTACTGCGGGAGGAGCTACGCCGAGTCCGCCGAGCTCGAGCGGCACTCGAGGGCGTCACATCCGGGCAAGGAGTGTTTCGTGTGCGAGAGGTGCTGCTCGAGCTTCGGCGAGGCGGACGCCTTCAGGGATCACTTGAGCGGCCACAATGATTAG
- Protein Sequence
- MAPPVGIDLGTTFSSIAVYENGQGNIIGDRRGKKLIPSMVYVCPKKGKYFVDSKRLLERLYDDEAVRLIIDSKETSYSLVRGADDMVAYEVEVNGSPMRIKPEEVSGEVLRYLKASAEEYFNGETVTEAVISVPAYFSNAQRKATVAAATSAGLKVLRLITEPVAAALHYIKNRNIKSKSMVFDWGGGTLDVSFIDVDDKAIEVKAVYGDSRLGGRDIDEVLFEHFYIKVTRQPQKFIRRLLGNCVKLKEHLSAADEFTTVLELYDGVDDLEMHLTREEFNKMNGSIFERLADIVNYALHDVGLNPAEGAPEDMEETATKCDWCLREGAPSRPIEERLWRFWKIVSKEAAHAPFGSNICSICDTRYDRFRDYIETCKRNESIVARLLAGPHVNSEPHIEDHVIVKPEPSEPHIEDHVIVKPEPSSEPHIEDDDIVKPEPSEPHIEDHVIVKQEPSEDHVIVKPEPSEPHIEDHVIVKPEPSSEPHIEDHDIVKTEAARPLELRVVLVDCRRRRTVECPRCAATFTQPSSLRSHLRIHTGDRPYKCTRCPKAFTQSSALNAHRRLHTGDRPFKCSHCEKRFVTSSSLRVHSRIHTGERPFACPHCDKTFSASSSLDLHLYIHSGEGGLTCELCGKGFTRPAGLKSHMVIHSGEKPFECPHCPRRFAFASKLRKHSYVHTDDKPFECSHCDRRFATAEYLRKHLRIYTGDKPFKCASCDKSFITAALLKRHLVVHTGLRPYRCQLCDKTFTLLGTLKKHRQIHDGVKKYGCLQCSRRFFDSSQLRRHSKGHVVPLRCSLCKEAYYSLSSLKLHLATTHPPDRPFSCPYCGRSYAESAELERHSRASHPGKECFVCERCCSSFGEADAFRDHLSGHND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -