Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000043.1:805061-806733[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1e-07 9.9e-06 26.0 2.3 3 23 87 107 85 107 0.97

2 16 1.6e-05 0.0014 19.2 0.5 1 23 113 135 113 135 0.97

3 16 0.00029 0.025 15.3 0.2 1 23 141 163 141 163 0.97

4 16 8.6e-06 0.00074 20.1 3.6 1 23 169 191 169 191 0.97

5 16 2.2e-06 0.00019 22.0 2.9 1 23 197 219 197 219 0.99

6 16 0.00024 0.02 15.6 0.6 1 23 225 248 225 248 0.94

7 16 2.6e-06 0.00023 21.8 0.7 1 23 254 276 254 276 0.98

8 16 3.9e-05 0.0034 18.0 7.0 1 23 288 310 288 310 0.98

9 16 6e-07 5.2e-05 23.7 1.6 1 23 316 338 316 338 0.98

10 16 1.8e-06 0.00015 22.3 4.3 1 23 344 366 344 366 0.98

11 16 1.3e-06 0.00011 22.7 2.4 1 23 372 394 372 394 0.98

12 16 1.1e-06 9.5e-05 22.9 3.3 1 23 400 422 400 422 0.99

13 16 0.0059 0.51 11.2 1.2 1 22 428 449 428 451 0.89

14 16 2.2e-06 0.00019 22.0 0.8 1 23 457 479 457 479 0.98

15 16 1.1e-07 9.4e-06 26.1 0.9 1 23 485 507 485 507 0.98

16 16 1.7e-09 1.5e-07 31.8 0.4 1 23 513 535 513 535 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1e-07	9.9e-06	26.0	2.3	3	23	87	107	85	107	0.97
2	16	1.6e-05	0.0014	19.2	0.5	1	23	113	135	113	135	0.97
3	16	0.00029	0.025	15.3	0.2	1	23	141	163	141	163	0.97
4	16	8.6e-06	0.00074	20.1	3.6	1	23	169	191	169	191	0.97
5	16	2.2e-06	0.00019	22.0	2.9	1	23	197	219	197	219	0.99
6	16	0.00024	0.02	15.6	0.6	1	23	225	248	225	248	0.94
7	16	2.6e-06	0.00023	21.8	0.7	1	23	254	276	254	276	0.98
8	16	3.9e-05	0.0034	18.0	7.0	1	23	288	310	288	310	0.98
9	16	6e-07	5.2e-05	23.7	1.6	1	23	316	338	316	338	0.98
10	16	1.8e-06	0.00015	22.3	4.3	1	23	344	366	344	366	0.98
11	16	1.3e-06	0.00011	22.7	2.4	1	23	372	394	372	394	0.98
12	16	1.1e-06	9.5e-05	22.9	3.3	1	23	400	422	400	422	0.99
13	16	0.0059	0.51	11.2	1.2	1	22	428	449	428	451	0.89
14	16	2.2e-06	0.00019	22.0	0.8	1	23	457	479	457	479	0.98
15	16	1.1e-07	9.4e-06	26.1	0.9	1	23	485	507	485	507	0.98
16	16	1.7e-09	1.5e-07	31.8	0.4	1	23	513	535	513	535	0.98

Sequence Information

Coding Sequence: ATGGACGTCGTCGCCTCGACCTGCGATTGGTGCCTGCAACCAGTACCGTCCGTCCGGCCGATCGAAGAGGGGTTATGGCACTTCTGGAAAGTGATCAGCGAGGAGAGCCCCACGTTGGAGTCCCTGAGGAGCATCTGCGAGACGTGCCGCTCGCGCTACGACGCCTTCGCCGACTACATCGGACGGTGCAAGAGCAACGAGGCCGTCGTAGAGACGGCcgtcccccctagcgctccgcccgtcgacaagcgtttggcctgctcctattgcgacaagcgcttcgccgacaggtcccacttgaacacgcatctgcgcactcatacgggcgagaggccgtttgcctgtacccaatgcgacaagcgcttcgccatcaagtcctccctggtcctccatcggcgcgttcacaccggcgagaggccgttcgcctgcacccaatgcgacaagcgcttcgccgccaacacccccctggtcctccatcagcgcgtccacaccggcgagaggccgttcgcctgtactcgatgcgacaagcgcttcaccagcaagacccacctcggcgaccacctccgtacccacaccggcgagaggccgttccgttgcgagcactgcgacaagacgttctcggccctcgtgtacctcaggtcgcacctgaggacgcacacgggcgagaagcggttcgcttgcgagtcgtgcgacaaacggttctacgtcgagtacgagctcaagaagcatgtctcggtgagacacttgggcgagaagcgctacgcctgcgagtactgcgggaggacgttcgccgcgttgttcagcctcaagaagcacctgaagacccatgcgggcgagaggcgcgtacggcgtggcggcccgttcgcgtgtcaccgttgcgacaagtgcttctcgggcaggtcccacctcgacgaccatctacgcacccatacgggcgagaaaccgttcgcctgtcccgaatgcgacaagcgcttcgccgccaagtccaccctgcacaaccatcaacgaacccacaccggcgagaggcggttcgcctgtacccactgcgacaagcgcttcggcagcaacacccacctcgtcgaccacatgcgcacccacaccggcgagaggcggttcgcctgtacccactgcgacaagcgcttcgccagtaagtcctatctcggcgaccacctccgtacccataccggcgagaggccgttccgttgcgagcactgcgacaagaccttcacggcggcgacgtacctcaggtcgcacctcaggacgcactcgggcgagaaacggttcgagtgtcagtcgtgcgacaagcgcttccacgtcgagtaccagctgaagttgcacgaggcggcgagccactcgggcgagaggcggtacgcgtgcgagtactgcggcaagacgtacgccgcgtcgttcaacttcaagaagcacctgaggatccacacgggcgagaggccgtacgcgtgcgaggtttgcggcaggagcttcacggactcgtcgagccgcaggacgcacatgaggacccatacgggcgagaggccgttcgagtgcccggagtgtgacgagagcttctcggactcgtccaatctgacgaggcaccgaagggtgcacgagcggtga
Protein Sequence: MDVVASTCDWCLQPVPSVRPIEEGLWHFWKVISEESPTLESLRSICETCRSRYDAFADYIGRCKSNEAVVETAVPPSAPPVDKRLACSYCDKRFADRSHLNTHLRTHTGERPFACTQCDKRFAIKSSLVLHRRVHTGERPFACTQCDKRFAANTPLVLHQRVHTGERPFACTRCDKRFTSKTHLGDHLRTHTGERPFRCEHCDKTFSALVYLRSHLRTHTGEKRFACESCDKRFYVEYELKKHVSVRHLGEKRYACEYCGRTFAALFSLKKHLKTHAGERRVRRGGPFACHRCDKCFSGRSHLDDHLRTHTGEKPFACPECDKRFAAKSTLHNHQRTHTGERRFACTHCDKRFGSNTHLVDHMRTHTGERRFACTHCDKRFASKSYLGDHLRTHTGERPFRCEHCDKTFTAATYLRSHLRTHSGEKRFECQSCDKRFHVEYQLKLHEAASHSGERRYACEYCGKTYAASFNFKKHLRIHTGERPYACEVCGRSFTDSSSRRTHMRTHTGERPFECPECDESFSDSSNLTRHRRVHER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -