Basic Information

Insect: Cryptocephalus moraei
Gene Symbol: -
Assembly: GCA_946251935.1
Location: CAMIUL010000043.1:850936-853407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.5e-07 1.3e-05 25.7 2.3 3 23 129 149 127 149 0.97

2 19 2.1e-05 0.0018 18.9 0.5 1 23 155 177 155 177 0.97

3 19 9.1e-05 0.0079 16.9 0.4 1 23 183 205 183 205 0.97

4 19 2.2e-06 0.00019 22.0 3.5 1 23 211 233 211 233 0.98

5 19 1.3e-06 0.00011 22.7 0.6 1 23 239 261 239 261 0.97

6 19 3.7e-05 0.0032 18.1 0.7 1 23 267 289 267 289 0.95

7 19 9e-06 0.00078 20.1 2.2 1 23 295 317 295 317 0.98

8 19 0.00085 0.074 13.8 4.0 1 23 323 345 323 346 0.95

9 19 1.2e-07 1e-05 26.0 0.9 3 23 357 377 355 377 0.98

10 19 1.1e-07 9.3e-06 26.1 0.8 1 23 383 405 383 405 0.98

11 19 6.6e-07 5.7e-05 23.6 1.7 1 23 415 437 415 437 0.98

12 19 2.7e-06 0.00023 21.7 3.4 1 23 443 465 443 465 0.98

13 19 1.1e-06 9.3e-05 23.0 2.5 1 23 471 493 471 493 0.99

14 19 0.0032 0.28 12.0 1.1 1 23 499 522 499 522 0.91

15 19 7.4e-07 6.4e-05 23.5 0.7 1 23 528 550 528 550 0.98

16 19 1.2e-07 1e-05 26.0 0.3 1 23 556 578 556 578 0.97

17 19 9.1e-07 7.9e-05 23.2 0.2 1 23 584 606 584 606 0.98

18 19 3.4e-06 0.0003 21.4 1.0 3 23 614 634 612 634 0.97

19 19 1.1e-08 9.5e-07 29.2 1.9 1 23 640 662 640 662 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.5e-07	1.3e-05	25.7	2.3	3	23	129	149	127	149	0.97
2	19	2.1e-05	0.0018	18.9	0.5	1	23	155	177	155	177	0.97
3	19	9.1e-05	0.0079	16.9	0.4	1	23	183	205	183	205	0.97
4	19	2.2e-06	0.00019	22.0	3.5	1	23	211	233	211	233	0.98
5	19	1.3e-06	0.00011	22.7	0.6	1	23	239	261	239	261	0.97
6	19	3.7e-05	0.0032	18.1	0.7	1	23	267	289	267	289	0.95
7	19	9e-06	0.00078	20.1	2.2	1	23	295	317	295	317	0.98
8	19	0.00085	0.074	13.8	4.0	1	23	323	345	323	346	0.95
9	19	1.2e-07	1e-05	26.0	0.9	3	23	357	377	355	377	0.98
10	19	1.1e-07	9.3e-06	26.1	0.8	1	23	383	405	383	405	0.98
11	19	6.6e-07	5.7e-05	23.6	1.7	1	23	415	437	415	437	0.98
12	19	2.7e-06	0.00023	21.7	3.4	1	23	443	465	443	465	0.98
13	19	1.1e-06	9.3e-05	23.0	2.5	1	23	471	493	471	493	0.99
14	19	0.0032	0.28	12.0	1.1	1	23	499	522	499	522	0.91
15	19	7.4e-07	6.4e-05	23.5	0.7	1	23	528	550	528	550	0.98
16	19	1.2e-07	1e-05	26.0	0.3	1	23	556	578	556	578	0.97
17	19	9.1e-07	7.9e-05	23.2	0.2	1	23	584	606	584	606	0.98
18	19	3.4e-06	0.0003	21.4	1.0	3	23	614	634	612	634	0.97
19	19	1.1e-08	9.5e-07	29.2	1.9	1	23	640	662	640	662	0.98

Sequence Information

Coding Sequence: ATGAGAAACGGTACGCCGTTACGTACGAAACCGTCGAGGGCGACACGACCGCCCGCCATTTTGGGGCGGTTGCGGGACTCGCTCGAACGGACACCGGAGGGCGCCACCGTAGGACGCACGACAACCGAGTATATTAAGATGACGACCTGCGATTGGTGCCTGCAACTAGGAGCGTCCGTCCGGCCGATCGAGGAGAGGTTATGGCGCTTCTGGAAGGTGATAAGCGAGGAGGGCTCCACGTTGGAGTCCCTGAGGAGCATCTGCGAGACGTGCCGCTCGCGCTACGACGCCTTCGCCGACTACATCGGACGGTGCAAGAGCAACGAGGCCGTCATAGAGACGGCGTTCCCCCCTAGCGCTCCGTccgtcgacaagcgcttggcctgctcctattgcgacaagcgcttcgccgacaggtcccacctgaacacacatctgcgcactcatacgggcgagagaccgttcgcctgtacccaatgcgacaagcgcttcgccatcaagtcctccctggtcctccatcggcgcgttcacaccggcgagaggccgttcgcctgcacccaatgcgacaagcgcttcgccgccaacacctccctggtgctccatcggcgcgtccacaccggcgagaggccgttcgtttgtacccgatgcgacaagcgcttctccagcaagtcctatctgaacctgcatcagcgcttccacaccggcgagaggccgttcgcctgtacccaatgcgacaagcgcttcgccgtcaagtcctctctggtccaacatcagcgcgtccacaccggcgagagacccttcgcctgtacgcgatgcgacaagcgcttctcgagcaagtcctatctcggcgagcacttgctcgcccacaccggcgagagaccgttccgttgcgagcactgcgacaagaccttctcggcggcgaggctactcaagttgcacctctcgacgcactcgggcgagaaacggttcgagtgcgagtcgtgcgacaaacagttctacgtcaagtccaggctgaagaagcacacggcgaagcaccattcgagcgagagtgagagtcggcccttcgggtgtccgtcctgcgagaagtcattcccgaggaagtccaccctcgagaagcacatgaggacccatacgggcgagaggccattctcgtgcgagacgtgcggcaggagcttcaaggatcgctcgaatctgacgagtcacgtggcgacgcacggcgggcgctcgggccgcggcaagccgttcccctgtccgcgatgcgacaggagcttctcgggccggttccacctgaacgcccacctccgcacccacacgggcgagaagccgttcgcctgtccgcactgcgagaagcgcttcaccggcaagccgcacctcagggaccatctccgcacccatacgggcgagaggccgttccgttgcgagcactgcgacaagacgttctcggcggccgtgtacctcaagtcgcacctgaggacgcactcgggcgagagacggttccagtgtcagtcgtgcgacaagcggttccacgtcgagtacgagctcaagttgcacgtggcggctagccatacgggcgagagacggtacgcgtgcgagtactgcggcaagacctttgcggcgtcgttcaacttcaacaagcacctaagggtccatacgggcgagaggccgtactcgtgcgacgtgtgcggcaagagcttcgcggactcgtcgtcgttgaagaagcacgccatgctgcactccggcgacaagtcgtacgcttgtccgatgtgcgacaagcgctacaagacgcccgggtcgctgaaagctcactctcgggtccacgtcggcgaggagggtctcgactgtccgttctgcgagaagacgttcacgcaggcgtcgacgcgcaagatccacatgaggacccatacgggcgagaggccgttcgagtgcccggagtgcgacaagtgcttcgcggactcgacgaatctgaggaggcaccggagggtgcacgagcggtga
Protein Sequence: MRNGTPLRTKPSRATRPPAILGRLRDSLERTPEGATVGRTTTEYIKMTTCDWCLQLGASVRPIEERLWRFWKVISEEGSTLESLRSICETCRSRYDAFADYIGRCKSNEAVIETAFPPSAPSVDKRLACSYCDKRFADRSHLNTHLRTHTGERPFACTQCDKRFAIKSSLVLHRRVHTGERPFACTQCDKRFAANTSLVLHRRVHTGERPFVCTRCDKRFSSKSYLNLHQRFHTGERPFACTQCDKRFAVKSSLVQHQRVHTGERPFACTRCDKRFSSKSYLGEHLLAHTGERPFRCEHCDKTFSAARLLKLHLSTHSGEKRFECESCDKQFYVKSRLKKHTAKHHSSESESRPFGCPSCEKSFPRKSTLEKHMRTHTGERPFSCETCGRSFKDRSNLTSHVATHGGRSGRGKPFPCPRCDRSFSGRFHLNAHLRTHTGEKPFACPHCEKRFTGKPHLRDHLRTHTGERPFRCEHCDKTFSAAVYLKSHLRTHSGERRFQCQSCDKRFHVEYELKLHVAASHTGERRYACEYCGKTFAASFNFNKHLRVHTGERPYSCDVCGKSFADSSSLKKHAMLHSGDKSYACPMCDKRYKTPGSLKAHSRVHVGEEGLDCPFCEKTFTQASTRKIHMRTHTGERPFECPECDKCFADSTNLRRHRRVHER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -