Cmor001794.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cryptocephalus moraei
Gene Symbol
-
Assembly
GCA_946251935.1
Location
CAMIUL010000043.1:808934-819916[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 4.9e-06 0.00043 20.9 2.5 3 23 86 106 84 106 0.97
2 39 5e-06 0.00044 20.9 0.2 1 23 112 134 112 134 0.98
3 39 3.2e-05 0.0027 18.3 2.6 1 23 140 162 140 162 0.97
4 39 1.4e-05 0.0012 19.5 2.8 1 23 168 190 168 190 0.98
5 39 0.032 2.8 8.9 0.6 1 22 196 217 196 219 0.88
6 39 3.2e-06 0.00028 21.5 1.3 1 23 225 247 225 247 0.98
7 39 2.7e-05 0.0023 18.6 1.0 1 20 253 272 253 275 0.95
8 39 5.2e-06 0.00045 20.8 0.6 1 23 281 303 281 303 0.97
9 39 1e-08 8.9e-07 29.3 0.6 3 23 312 332 310 332 0.97
10 39 5.6e-08 4.9e-06 27.0 0.2 1 23 338 360 338 360 0.97
11 39 9.9e-08 8.6e-06 26.2 0.6 2 23 367 388 366 388 0.97
12 39 9.8e-08 8.5e-06 26.2 1.0 1 23 394 416 394 416 0.94
13 39 4.8e-05 0.0041 17.8 1.9 3 23 424 444 422 444 0.98
14 39 4.8e-08 4.2e-06 27.2 0.7 1 23 450 472 450 472 0.97
15 39 1e-06 8.7e-05 23.1 3.7 1 23 481 503 481 503 0.98
16 39 1.1e-06 9.9e-05 22.9 4.3 1 23 509 531 509 531 0.98
17 39 2.3e-06 0.0002 21.9 2.4 1 23 537 559 537 559 0.99
18 39 0.0022 0.19 12.6 5.2 1 23 565 587 565 588 0.96
19 39 6.4e-07 5.6e-05 23.7 0.9 1 23 594 616 594 616 0.98
20 39 1.9e-08 1.6e-06 28.5 0.4 1 23 622 644 622 644 0.97
21 39 5.3e-07 4.6e-05 23.9 1.9 1 23 761 783 761 783 0.97
22 39 1.6e-05 0.0014 19.2 3.6 1 23 789 811 789 811 0.97
23 39 4.3e-06 0.00037 21.1 2.4 1 23 817 839 817 839 0.99
24 39 0.065 5.6 7.9 1.3 1 23 845 868 845 868 0.90
25 39 3.5e-05 0.0031 18.2 1.1 1 23 874 896 874 896 0.98
26 39 3.7e-06 0.00032 21.3 0.1 1 19 904 922 904 926 0.95
27 39 4.2e-05 0.0036 18.0 1.3 1 23 932 954 932 954 0.96
28 39 0.0026 0.22 12.3 0.2 1 23 960 983 960 983 0.95
29 39 3.3e-06 0.00029 21.4 5.4 2 23 996 1017 995 1017 0.97
30 39 6.9e-06 0.0006 20.4 3.0 1 23 1023 1045 1023 1045 0.98
31 39 2.4e-05 0.0021 18.7 5.9 1 23 1051 1073 1051 1073 0.99
32 39 0.02 1.7 9.5 1.8 1 23 1079 1102 1079 1102 0.94
33 39 4.3e-07 3.7e-05 24.2 0.3 1 23 1117 1139 1117 1139 0.97
34 39 1.3e-06 0.00011 22.7 1.2 3 23 1147 1167 1145 1167 0.98
35 39 6.9e-06 0.0006 20.4 0.3 1 20 1173 1192 1173 1195 0.95
36 39 0.00083 0.072 13.9 0.2 1 19 1201 1219 1201 1220 0.96
37 39 2.3e-06 0.0002 21.9 1.1 3 23 1227 1247 1225 1247 0.97
38 39 4.4e-08 3.8e-06 27.3 1.9 1 23 1253 1275 1253 1275 0.98
39 39 0.0023 0.2 12.5 0.5 3 23 1283 1303 1281 1303 0.97

Sequence Information

Coding Sequence
ATGAGCGCCGTTGCTACTTGCGATTGGTGCCTGCAACGAACAGCGTCCGTTCGTCCGATCGAGGAAAGGTTATGGCGCTTCTGGAAGGTGATCAGCAAGGAGGGCCCCGCGTCGGAGTCCCTGAGGAACATCTGCGAGACATGCCGCTCGCGTTACGACACCTTCGCCGACTACATCGCACGGTGCAAGAGCAACGAAACCGTGCTAGAGACGGCGTTCTCCCCTAGGGCTCCGCCcgccgacaagcgcttggcatgcccgcattgcgacaagcgcttcgtcggcaggttccacctgaacgcccacctccgcacccacacgggcgagagaccgttcgcatgtcccgaatgcgacaagcgcttcgccgccaaatccaccctcggcaaccatcttcgcacccacaccggcgagaggcggttcgcctgtacccgatgcgacaagcgcttcgcgagcaagacccacctcggcgaccacctccgcacccataccggcgagaggccgttcagctgcgtgcactgcgacaagaccttcactgcggcgacgtacctccgatcgcacctcaggacgcacacgggcgagaaacggttcgcgtgcgaatcgtgcgacaagcggttccacgtcgagtacgagctgaagttgcacgaggcggcgagccactcgggcgagaggcggtacgcgtgcgagtactgcggcaagacgtacgccgcgtcgttcaacttcaagaagcacctgaggacccacacgggcgagaggccgtactcgtgcgacgtgtgcagcaggagcttcaaggactcgtcgtcgctgaacaagcacacgccgctccactccggcgacaggccgcacgtctgcccgaagtgcgacaagcgctacgcgacgccctcggcgttgaagttgcactctcgagtccacgccgacgacgaggaacgtctcgactgtccggtctgcgacaagacgttcacgcaggcgtcgagcctcaagactcacatgaggacccatacgggagagaggccgttcgcctgtgaggtatgcggcaagagcttctctgactcgtcgaacctcaacgctcactcccgcatccacgtcggcgagaaacgtatcccgtgtccgtcctgcgagaagaccttcacgcagtcgtcgaacctcaagaagcacctgagggtccacacgggcgacaggccgtacacctgcgaggtatgcggcaagagcttcacggactcgtcgaatctgaagaagcactcggtgagccactcggaggacaggccgttctggtgcgagcactgcgacaagaccttcacggcgtcgatcaacctcagtaagcacctgaggctccacgatgacgacaggccgttcgtctgcgacgagtgcggcaggagcttcaaggactcgtcgaacctgaagaagcacacggcgagtcacgccgggttcacaggtcgcaagccgttcgcctgtccgcattgcgacaagagcttctcgggcaggttccacctgaacgtccatctccgcacccatacgggcgacaagccgttcgcctgtcctcactgcgacaagcgcttcaccggcaactaccacctgagggaccatctccgtacccatacgggcgagcgaccgttccggtgcgagcactgtgacaagacgttctcggcggccgtgtacctcaggtcgcacctcaggacgcacacgggcgagaaacggtacaagtgcgagtcgtgcgacaagcggttccacgtcgagtacgagctgaggaagcacacggcgagacatcactcgggggagaaacggtacagttgtgagtactgcgacaagaccttcgcggcgtcgttcaacctcaacaaacacctgaggatccatacgggcgagaggccgttcgcctgcgaggagtgcggcaagggcttctcggactcgtcgaatctgacgaagcaccgaagggtgcacgagcgCAGCGAAGGCCAAATAAAAGAAGAAGAAGAAGAAGATTACGGTTCCGTTTTAGTGAATCCACTATCCATATCCAATTTGATATCAAAGTCTCGTCTGGAAGAGATGAGCGTCGTCGCGTCGACCTGCGATTGGTGCCTGCAACTAGTAGCGACCGTCCGGCCGATCGAGGAGAGGTTATGGCATTTCTGGAAGGTGATCAGCGACGAGGGCGCCACGTCGGAGTCCCTGAGGAACATCTGCGAGGGATGCCGGTCGCGCTACGACACCTTCGCCGACTACATCGCAGGGTGCAAGAGCAACGAGGCCGCGATAGAGGAGGCGTTCcgccgtagcggaaagcggttcgcctgtcccgaatgcgacaagcgcttcgcccgcaagtacgacctccacaatcatcgacgcgtccacaccggcgagaggccgttcgcctgtactcgatgcgacaagcgcttctccaccaagacccacctcggcgaccacctccgtacccacaccggcgagaggccgttccgttgcgagcactgcgacaagaccttctcggcggcgatttacctgaggtcccacctcaggacgcacttgagcgagaaacggttcgcttgtcagtcgtgcgacaagcggttccacgtcgagtacaagctgaagttgcacgtggcggcgagacactcgggcgagaagcggtacgcctgcgagtactgcgacaagagcttcgtggcgtcgttcaggctcaagaaccacctgaagacccatacgggcgagaggaggaggtcgtacgcgtgcgaggtgtgtggcaagagcttcacgaacccggcatcgctgaagaggcacgcgccgctccactccggcgacaagccgcacgcttgtccgaagtgcgacaagcgctacgcgaagcccgagtcgctgaagttgcattcccgcactcacgtcgaaggggggcgcttcgcctgtccgtcctgcgagaggacgttcgcgcgggcgtcgggccgcaaggagcacgtgaggtggttccatacgggcgagaggcgcgtacgacgcggcgaaccgctcgagtgtcaccattgcgacaagaggttcgccggcaggtcccacctgaacgcccatctgcggactcataccggcgtcaagccgttcgcctgtcctcgctgcgagaagcgcttcgcaagcaagttccacctgaaggaccatctccgtacccataccggcgagaggccgttccgttgcgagcactgccacaagacgttctcggcggcgacgtacctgaggtcgcacctcaggacgcactcgggcgagaaacggttcgagtgtcagtcgtgcgacaagcggttccacgtcgggtacgagctgaggaagcatgcggcgaagcagcactccgacgagcgtacgccgaggacccatacgggcgagaggccgtacgcgtgcgaggcgtgcggcaagagcttcaaggactcatcgaatctgaaagctcactctcgcatccacctcggcgagaggcctttcggctgtccgtcctgcgagaagacgttcacgcagacgtccaaccttaagaagcacctgagggtccatacgggcgataagccgtactcgtgcgaggtgtgcggcaagagcttctcggacccgaggacgctgaagaaccacgtgccgctccactcgggcgacgagccttacgcctgcctggagtgcgacaagcgttacaagacgcccggctcgctgaaggttcactccggcgagaagctactcgactgtccgtcctgcgagaggacgttcacgcggtcgtcgagcctcaagatccacacgaggacccatacgggcgagaggccgttcaagtgccagaagtgtgacaagagcttctcggactcgtcgaatctgaaagctcactcccgcatccacctcggcgagaggccttacggttgtccgttctgcgagaagacgttcacgcagtcgttgggccgcaactcgcacctgagggtccatacggcgggcggcgagtag
Protein Sequence
MSAVATCDWCLQRTASVRPIEERLWRFWKVISKEGPASESLRNICETCRSRYDTFADYIARCKSNETVLETAFSPRAPPADKRLACPHCDKRFVGRFHLNAHLRTHTGERPFACPECDKRFAAKSTLGNHLRTHTGERRFACTRCDKRFASKTHLGDHLRTHTGERPFSCVHCDKTFTAATYLRSHLRTHTGEKRFACESCDKRFHVEYELKLHEAASHSGERRYACEYCGKTYAASFNFKKHLRTHTGERPYSCDVCSRSFKDSSSLNKHTPLHSGDRPHVCPKCDKRYATPSALKLHSRVHADDEERLDCPVCDKTFTQASSLKTHMRTHTGERPFACEVCGKSFSDSSNLNAHSRIHVGEKRIPCPSCEKTFTQSSNLKKHLRVHTGDRPYTCEVCGKSFTDSSNLKKHSVSHSEDRPFWCEHCDKTFTASINLSKHLRLHDDDRPFVCDECGRSFKDSSNLKKHTASHAGFTGRKPFACPHCDKSFSGRFHLNVHLRTHTGDKPFACPHCDKRFTGNYHLRDHLRTHTGERPFRCEHCDKTFSAAVYLRSHLRTHTGEKRYKCESCDKRFHVEYELRKHTARHHSGEKRYSCEYCDKTFAASFNLNKHLRIHTGERPFACEECGKGFSDSSNLTKHRRVHERSEGQIKEEEEEDYGSVLVNPLSISNLISKSRLEEMSVVASTCDWCLQLVATVRPIEERLWHFWKVISDEGATSESLRNICEGCRSRYDTFADYIAGCKSNEAAIEEAFRRSGKRFACPECDKRFARKYDLHNHRRVHTGERPFACTRCDKRFSTKTHLGDHLRTHTGERPFRCEHCDKTFSAAIYLRSHLRTHLSEKRFACQSCDKRFHVEYKLKLHVAARHSGEKRYACEYCDKSFVASFRLKNHLKTHTGERRRSYACEVCGKSFTNPASLKRHAPLHSGDKPHACPKCDKRYAKPESLKLHSRTHVEGGRFACPSCERTFARASGRKEHVRWFHTGERRVRRGEPLECHHCDKRFAGRSHLNAHLRTHTGVKPFACPRCEKRFASKFHLKDHLRTHTGERPFRCEHCHKTFSAATYLRSHLRTHSGEKRFECQSCDKRFHVGYELRKHAAKQHSDERTPRTHTGERPYACEACGKSFKDSSNLKAHSRIHLGERPFGCPSCEKTFTQTSNLKKHLRVHTGDKPYSCEVCGKSFSDPRTLKNHVPLHSGDEPYACLECDKRYKTPGSLKVHSGEKLLDCPSCERTFTRSSSLKIHTRTHTGERPFKCQKCDKSFSDSSNLKAHSRIHLGERPYGCPFCEKTFTQSLGRNSHLRVHTAGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-