Basic Information

Gene Symbol
Trerf1
Assembly
GCA_946251935.1
Location
CAMIUL010000488.1:124796-188487[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-09 3.4e-06 27.4 0.2 2 46 1715 1759 1714 1759 0.96

Sequence Information

Coding Sequence
ATGACTGTAGGCGGAGAGGTCCTTAGAATCTCCACGTCACCGGACGGCTCCGTGAAAGTCGCCGGATGGCGGAAGTCGTCCGAGTGGATCGAGGTGGATCTCCCTGTAAGTAGGCGCTCGCAGAGGCTGGCTGGACGAAAGGCGGATCGCCCTTCCCGTCGAGGAGGCGGTAGCGAGGCGGTCGCCACGACCTTCGACCTGTTCGACTCGTCCTCCGGCCCCGACCTGACGCTCTCGCCTCAGACGTTCACGAACTCCGCCGAGGCTTTCATCAACGACAACTCGAACAGCCTCGGCGTTTCCACCGACAACGATGCAGTTTCGACGACAACGTCCGACGACAAGAAACCCGGCAGCACTTCTGAACTAGTCAAGGTGTCCGCCAAACGGTCCCGGCCTAAGCCCACTTCGCCTAATAGACAAGGGCCTCAGCAATGTCAGGTCTGTGCCAAAGTATTCGGGAACGCCTCAGCCTTAGCCAAACACAAATTGACCCACAGCGACGAGAGGAAGTACGTCTGCAGCATGTGCGGCAAAGCGTTCAAAAGACAGGATCATCTGAACGGTCACATGCTGACCCACCGCAACAAGAAGCCGTACGAGTGCAAGGCGGACGGCTGCGGCAAAAGCTACTGCGACGCTCGATCGTTGCGCCGCCACACGGAGAACCACCACAGCAGCAGCGGCAGCTCATCGTCCTCGGCGACGTCGTCATCGCCGCCGGCGGGCGCCGCCTCCGGCGACGCCGCCTCCCCGCACGGCTCCTCCAGCTGCATCCAGTACGCGCCGCCGACGGCGACGACGACGTCGACGTCGAACAGCGCCACCTCGACGACGAGCGGCGGCGGCAAGAGCCAGCTGCAGCAGCTGCTCGCCACCGAGCCAGTCAAAGTGAGTACCGAACGAGTCTCGTCTGACGTTCCCAATTTAAGCTCCGCCCCCCTCGACGCGGCCCCGCCCCTTTCGGCGGCTCCGCCTGACAACGCGGCTCCGCCATACGCGGATTCCCCACCCACGAGCGGGAACGGGGGCAGCAACGACGGCCTGACGAAGCAGCAGCTCGACCTGATCCACCAGATCATGGAGCAGACGCAGAGGCAGTCGCACGCCGTCGTCCAGGCGAGCAAACCCACGGGGATGACGACGAAGACGACGAATTCCACGACGAGCAAACCGGTCAGCTCTACCACGAGCAAGACGTCGCCGGCGAAGAACCACCATCACCATCATCACCATCAGCAGAGCAAGGGAGGCGGGAGCTCGTGGAGCACGACGCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGAGCCTCCAATTTCATGTCTGTTCATACGTGACAGTCCACCGGTCCCAGAGAAACACCTGTGCATCACCATTTCAGATTTTGAACAAACTCAGTCAAATGAGCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGGGCCTCCAATTTCATATCTGTTCATACGTGACACTTCATCGCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGAGCCTCCAATTTCATGTCTGTTCATACGTGACAGTCCACCGGTCCCAGAGAAACACCTGTGCATCACCATTTCAGATTTTGAACAAACTCAGTCAAATGAGCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGGGCCTCCAATTTCATGTCTGTTCATACGTGACACTCTATCGGTCCCCGAGAAACACCTGTGCATCACCATTTCAGATTTGGAACTAACTCAGTCAAATGAGCTAGAAATACGTGTCAAATACTCGTTGTCGTATTATTCAGCCGCCTCTAGTGATCGCCATAGGCCTCAAATTTCATGTCTGTTCATACGTGACACTCCATCTCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGGGCCTCCAATTTTATGTCTGTTCATACGTGACACTCCATCGGTCCCCGAGAAACAACTGTGCATCACCATTTCAGATTTGGAACAAACTCAGTCAAATAAGCTACAAATACGTGTCAAATACTCGTTGTCGTATTATTCAGCCGCCTCTAGTGATCGCCAGGGGCCTCCAATTTCATGTCTGTTCATACGTGACAGTTCACCGGTCCCCGAGAAACAACTGTGTATCACCATTTCAGATTTTGAACAAACTCGGTCAAATGAGCTACAAATACGTGTCAAATACGCGTTTTCGTATTATTCAGCCGCCTCTAGTGATTGCCAGGGGCCTCCAATTTCATGTCTGTTCATACGTGACAGTCCACCGGTCCCAGAGAAACACCTGTGCATCACCATTTCAGATTTTGAACAAACTCAGAAGAGGGGGAGGGTTGGCCAACAGCAGCAGCAGCAGCAGCAGCAGGGCGGCCACCACCAGCCGGCGACGCCCAAGCAACAGGGCGTCGCGACGGGGGCGCTCAGCCCCCAgacgaaggtgacgacgacgacgtcgacgtcgtcctcgtcggcgacgtccgcctcctcctcggccgtcaactcgacgacgacgacCGCCAAGACCGAATCGAAACCGGTCGAGTGCAACCTGTGCCACAGGAAGTTCAAGAACATACCGGCGCTCAACGGACACATGAGGCTGCATGGGGGATATTTCAAGAAGGACGCCGAGAACAAGAAATGCGAGAAGAAAGACCCGACTGGCCCGCCGCTGCAGACCGCGAGCGTCAGCGTGCGAGCCCTCATCGAGGAGAAGATCATCAGCAAGCGCACGACGAACCCGAGCGTCCAGGCTTCGTCCTCCTCCGTCTCCGCCTCCTCCTCCAGCGTCGGGGGCGGAGCGCACGACGACAACCACCACCACCATCACCACCAGCAGCAGCAGCACCACCACCACCAGAAGGGCGGTCTCGGCGCCGCCCCCGCATCGGCCCCGCCCCTCTACCCGATAACGGTACACCCCGGAGGGGGCGGAAACTCCGCCGACCTCGAGTCGAAGATCTCCTCGTTCGTCGTGCCGGCGCCGCCCCAGCAGGCGTCGGAGAAGGGGAGGAGGCACTCCGACGCCGACGCGTTCAGGAGTTCTCAGACGCAGCAGGAGGCGCAGGCGCTGGCCGACCTGATCCTCAAGCGCGAGAAGGCTACGGTGAAGAGGACCGCCTCGGACCCCGGCCAGTCGCAGTCGCCCTCCTCGTCGATCATACAGTTCCAGTCGGCGGACTCGTTCACCCTCGCGAACGTCACCTACCAATCCGAGGCCGCCGAGTTCATATCGTCCACGCTGCAGGACGAGGTGTTCACGCAGGTCCAGGACACCATGCTGCTGCAAGGCGTCGACCCGCACCAGCTCGCCTCGATCCAGTTCCAGGCCGACAACCTGATCCAGGAGCAGGGCGGGCAGCAGCTGCAGGACTTCAAGCTGGAGGACATCTCGCTCGACGAGCCGTCGGTCGTCGAGCGGCCGCAGGCGTTCCGGCCAGGCCACCCCGTCAACCAGGACCTGCAGGCCGTGCTCGACTCGCCGCTGCCCGAGAGCCTCGCCGAGTTCAGTACGTTCCACTCGACGAACAACCTCGACATGCCGTCGCCCGGCTACCAGACGCAGTCGCCCGCGCAGTATGCGCGGTCGCCGCATACGATCGCCGCGCAGTCGCCGCTCCAGAGTCCGCTCGTCAGGCACGACTCGCCGGGGTTCGCGTACCCGACGCCGCCCGCGAGCCACGAGGGGCAGAGCCCCGGCTTCGGGCAGAACGCGATGCTCCCCATGGTGTCGCCGAACGGGCAGGAGTTCGGGCAGATCGTCGACAGGGGCGTGTACGAGGAACCTCCGCAGGCGTCCTCTCCGCTGTCCGCCGCCTTCTTCACCTCGACCATGTCGGACTCCGCCGCCGTCGAGGAGGCCCTCGAGGAGGTCCTCCCCGGCGAGCCGATCTACCCCCTGACGAACTCCCCCTCGCCCCAGTCCCCTCTCGGCCTCACCCCCGTCCCCTCCCCCATCTCCAACATGGTCACCTCGTCCGTCCCCTCGCCGCACGCCTCCGCCGCCTACTCCTCCCCGACGACGCCGACCCCGACGCCCCACTACCCCAACAACAACTGGGTGAACGGCATGATGCTGCCGAACTCCGACGATCCGCTCCTCTCGAGCAGCCCGAAGGACTTCTTCCTGAGGAAGAAGATCGAGATCAACGGCGTCCCGCTCAGGCTGATCAGCAACAACGGCCTCGTCGAGCTGAACAGCGCGAACTTCGCCGGCATCCTCGTCGACGCGAACGGCGAGATCAAGCTGATCCAGACGGGCGGCGCGACGTTCCAGGCGAAGAACGTCGTCGTCGCGACGGCCGCCCAAGCGATACCGCTCGACGACGACAGGACGAAGATCCAGAGGATCGTCAAGGCGGTGCAGGGCACGCTGCCTGTGAGGGCGGGCCCGAGGGGCAGACTGCCGATGGTCGCCGAGGTTAAGAAGGAGGAGGGCGACGACGTCTTCCTCAGCCCGACGACGATTTCAGTGAGTCCCGTAAGGATCTCGAGGAAACGTCCCAGGACGGAATCGCTGAAGCTGCCGGTTTTCCACCAGTCGAAGCTTCGCGCTACCCGCAGCAAACCCCAAGGAACGGCTCCGTACACTCCACAGCCTATACTGAACCCCCAGAGGCAGGGCACGGGGTTGTACTCTAATCTGAAGAATAGAGCCGAGGACAGCATGCCGTGGAACAACGACCCGACGCCCGAAACGGACTCGACGCCACACGTCAACATCGGCCCGCAATTCCAATGCAACCTGCAACAGACCATAAACAGGAACAGCCCAGATCGCGTGCACGAGGACCTGCTGTGGGATCCCGGCATAAGCAGCTGCACCGACTCAGAAGTTGACATGTATCTGGACTTCGCGTGTTGCGCGGCAGTGCCTGGAGGCGGTAGGAACAAGGAGTACGCCATGCACCTCTTACATCTCTGCGGAGGGAACATTCATGAGGCGATGCTGAAGCTGATGCAACCCACGCCGAACCTCCCGAACGATCACCCGCTGTTGGCGTACAGATACAGCGAGAGCGACAAGTGGACCTCGCTGGAGACGGAGAAGTTCCACAGGGCGCTACTCAAGTACGACAAGGACTTCCGGGGGATCGCGCAGGAGATTCGCACGAAATCCGTGAAGCAGTGCGTGCAGTTCTACTACGTGTGGAAGAAGGTCTGCACCGACGAGTACCGCAGGCTGAAGCAGGTGAGGGAGAGGAGGCACAGCCATCTCAGAGGTTCAGATTACGATATGGACGAGAAACCTTATCCAGACGTCAAGCTCTTGGGGATCGCTGATAGTGGATCGCCGATGCCCATCCCGGAGACGAGGAGCTTCGTCTGCGAGTTTCCTGAGTGCTCAGCGAGCTTCAACTCGAGGGCCGCCCTGAACGGCCACATCCGCATCCACGGCGGCACCGcccgcaactccccgacgccctcctcaacgacggcgtcgtcgtcgtcgtcgctcccttcggcgtcggagaggaggacgtcggcgtcgtcgtcggcggcgtcggcgacgtcgacgacgacgacgCTCTGCCACCCGGACTCGCAGGAGGAGTACCCCTGCAAGATATGCGGGAAGGTGTTCACTAAGATAAAGAGCCGCAGCGCGCACATGAAGTCCCACCGCCCCCCCGACGCCGAGCCCCTCAAGCGGAAGGAGAAGGAGGCGCCCTCGTCGACGACATTCGAACTGTCCGTGCCAAGTCCTTATAGTACCTAG
Protein Sequence
MTVGGEVLRISTSPDGSVKVAGWRKSSEWIEVDLPVSRRSQRLAGRKADRPSRRGGGSEAVATTFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVSTDNDAVSTTTSDDKKPGSTSELVKVSAKRSRPKPTSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSSSGSSSSSATSSSPPAGAASGDAASPHGSSSCIQYAPPTATTTSTSNSATSTTSGGGKSQLQQLLATEPVKVSTERVSSDVPNLSSAPLDAAPPLSAAPPDNAAPPYADSPPTSGNGGSNDGLTKQQLDLIHQIMEQTQRQSHAVVQASKPTGMTTKTTNSTTSKPVSSTTSKTSPAKNHHHHHHHQQSKGGGSSWSTTLQIRVKYAFSYYSAASSDRQEPPISCLFIRDSPPVPEKHLCITISDFEQTQSNELQIRVKYAFSYYSAASSDRQGPPISYLFIRDTSSLQIRVKYAFSYYSAASSDRQEPPISCLFIRDSPPVPEKHLCITISDFEQTQSNELQIRVKYAFSYYSAASSDRQGPPISCLFIRDTLSVPEKHLCITISDLELTQSNELEIRVKYSLSYYSAASSDRHRPQISCLFIRDTPSLQIRVKYAFSYYSAASSDRQGPPILCLFIRDTPSVPEKQLCITISDLEQTQSNKLQIRVKYSLSYYSAASSDRQGPPISCLFIRDSSPVPEKQLCITISDFEQTRSNELQIRVKYAFSYYSAASSDCQGPPISCLFIRDSPPVPEKHLCITISDFEQTQKRGRVGQQQQQQQQQGGHHQPATPKQQGVATGALSPQTKVTTTTSTSSSSATSASSSAVNSTTTTAKTESKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDPTGPPLQTASVSVRALIEEKIISKRTTNPSVQASSSSVSASSSSVGGGAHDDNHHHHHHQQQQHHHHQKGGLGAAPASAPPLYPITVHPGGGGNSADLESKISSFVVPAPPQQASEKGRRHSDADAFRSSQTQQEAQALADLILKREKATVKRTASDPGQSQSPSSSIIQFQSADSFTLANVTYQSEAAEFISSTLQDEVFTQVQDTMLLQGVDPHQLASIQFQADNLIQEQGGQQLQDFKLEDISLDEPSVVERPQAFRPGHPVNQDLQAVLDSPLPESLAEFSTFHSTNNLDMPSPGYQTQSPAQYARSPHTIAAQSPLQSPLVRHDSPGFAYPTPPASHEGQSPGFGQNAMLPMVSPNGQEFGQIVDRGVYEEPPQASSPLSAAFFTSTMSDSAAVEEALEEVLPGEPIYPLTNSPSPQSPLGLTPVPSPISNMVTSSVPSPHASAAYSSPTTPTPTPHYPNNNWVNGMMLPNSDDPLLSSSPKDFFLRKKIEINGVPLRLISNNGLVELNSANFAGILVDANGEIKLIQTGGATFQAKNVVVATAAQAIPLDDDRTKIQRIVKAVQGTLPVRAGPRGRLPMVAEVKKEEGDDVFLSPTTISVSPVRISRKRPRTESLKLPVFHQSKLRATRSKPQGTAPYTPQPILNPQRQGTGLYSNLKNRAEDSMPWNNDPTPETDSTPHVNIGPQFQCNLQQTINRNSPDRVHEDLLWDPGISSCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHLCGGNIHEAMLKLMQPTPNLPNDHPLLAYRYSESDKWTSLETEKFHRALLKYDKDFRGIAQEIRTKSVKQCVQFYYVWKKVCTDEYRRLKQVRERRHSHLRGSDYDMDEKPYPDVKLLGIADSGSPMPIPETRSFVCEFPECSASFNSRAALNGHIRIHGGTARNSPTPSSTTASSSSSLPSASERRTSASSSAASATSTTTTLCHPDSQEEYPCKICGKVFTKIKSRSAHMKSHRPPDAEPLKRKEKEAPSSTTFELSVPSPYST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00392142;
90% Identity
iTF_00392142;
80% Identity
iTF_00392142;