Cmor001480.2
Basic Information
- Insect
- Cryptocephalus moraei
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_946251935.1
- Location
- CAMIUL010000038.1:424979-432705[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 1e-14 54.2 0.0 1 44 23 67 23 68 0.94 2 2 4.9e-19 1.6e-15 56.8 0.0 1 43 397 440 397 442 0.95
Sequence Information
- Coding Sequence
- ATGTCCCGTAACGTTGAGGATGAAGCGAAACCTAGGATGTCGGCCGTCGCGGGGAGGAGGACCTACACCGAGGACGAGCTCCAGGCCGCCCTCAGGGACATACAGTCCGGCAAGCTGGGCACGAGGAGGGCGGCCGTCATTTACGGCATACCAAGATCCACCCTTCGTAACAAAGTATACAAACTCGCCTTGGAACGGGAACGGGAATCGGTCCTGAATAGCTCGACGGCGTTAGAGGAGGAGACGATGGACGACGAGAAGGAGCTGTCGGGCGCCGAGGAGGAGAAGGAGGTGGAGAAAGCGCTCCAGGCGCCGCTCCTCACCCTCGCCGACCTCTTCAGGCTCACCGGAAGGGATCAGGTGCCCGACGCCCTCAAGTCCATCCTCCACAAATCGAAAGAGGGCCACCAGCAGGACATCCAGCAGCTGTTCCTCGCCTACCAGAACCTCCTGGCCGCCGGTGGCGGCGTGCAGAAGCCGCCGCCGGAGGAGAGCCACCAACACCACCTCCACCACCACCACCTCCACGTGCCCGACTTCGTGAAGCGGATCATCACCGAGGAACAGCTGCTGAAGATGCAGCAGAACAACAACGGCGAGAGCGAGAAGCTGACGAGGCCGAGTCCGAGCAACTCGGTCATCACCAAGATCGAGAGGCCGAGGTCCGAGTCGGACATGGAGGCGGAGGACTCCTCCTCGAATGTGATACTCAAAATTCCGTCCTTTAAGCCGACGTCGAGCAAGAACGGTTGCGATATATTCAGGAGTCTCGAGCCGACGGGTTCTCTGATCTCCCCACCGATAACGACGGATTCGTCGAATTCGCCGCCCGCGATGCCGCCCAAGGGCGGCCTTTACATCAAAGACATGAAAGACGTGATAGCgcagagcataagtcaaaaactgcagcaggagcagcagcagcagcaacaacaacaacaacaacaaccaccgaggagacccgtcctcgacatcgacttcaacaggggcggtttcacccctccgttggggacaggggtgtccgtcattaggacgcaacaggagctcgggagacagttccaacaacagcagcagcaacaacaacaacagcagcagcagcaacaacaacagcagcatcagcaggttaaaccgtcggggagcaccgGAGGGAAAGGTACTCGACCCAAGCGAGGCAAGTACAGGAACTACGACAGGGACAGCCTCGTCGAGGCGGTAAGGGCGGTCCAGCGGGGCGAGATGTCGGTTCACAGGGCGGGCAGTTATTACGGAGTGCCCCATTCGACGTTGGAGTACAAGGTGAAGGAGAGGCACCTGATGCGGCCGAGGAAGAGGGATCCGAAACCGAATCCCGTCGACGAGAAGATCGCCAGCTTGAAACAGAACGACCTCCGCAACACGCAGGACAAGCTGAAGCAGCCGCTGATGAAGCCGCCCCAGAAATTTCCGCCCACCTCGCCGAACGGGATGAAGCTGCCGATCTTCGAGCCGGGCATGGCGCCCCTCGGCACCTACAACCCGGCGCCTCCGCCCTTCCCGTTCTGGCCGCACCCGGGCTTCTCCCCCCTGCCGCTCGACTACGCGAGGAACCCCTCGACGCCCTTCCCGGAGCTCTTCGCCTCGCAGATGATGCAGAAGCTCCAGGAGGAGTCGTCCAGGACGTTAGGTGCCTCGCCGCAGGCTTCGACCACCGCCTCGACGGTCCCGTCGACGACGACGCCTCAGGCGCTCGCGAAGACCGCCCGCCAGATGGCAGAGTCGCTGCTGGAAGCGCCCGGCACTTCGAACGGCTCCTTCCTCGACGGCATCATCCGTTCGAGCCTGGAGTCGGGGGTGCCGGTGGTCGGGGCGGCCGACCATCACCTCCACCACCACCATCACCAAAGGGGCGGCGGGGCCTCCCCCGTGAGCGGCGGCGGCGGAGGCGAAGGCGACGACGGCGACGGCGTCGCCGCCCCGGGCAGCAGCGAAGAGGAGAGGAACGTCTCGCAGATGAGCAACAAAGCTCTGCTCGATCAGCTGTGTAGGAACAGCAGGCTGACGCCGCTCTCGTCGAGGGCGGCGGAGGGCGGCAGTTCCTCGGGAGACGAGGCGACGGGCCGGCGGGGCAGCCCCGTCAACTTCTCGACGGGCGGCGGAGCTTCCCACGAAGAGGCGACCCTCGACGAGGACTCGTCGTCGCGACACGAGAGGGCCGACAATAACGGCGACGGCACGCAGTCGATCGACCTGTCGAACGACTCTGACGACCATCATCACCACCACCACCACCTCCAGCAGCAGCAGCAGCTGCAGCCGCCGCCGGCGAAGCAGCCGCGGATCTACCTGAAGCCCGACCTGGTGCGGCCGGAGAACCTCAAGCCCGAGATGCTCGTCCGTTTCAGGGACGTCCTGAGGAACGGCCTCGAGGGCGGCGAGGCGGAGGACGACGCGCCCGAGCAAGACTGA
- Protein Sequence
- MSRNVEDEAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESVLNSSTALEEETMDDEKELSGAEEEKEVEKALQAPLLTLADLFRLTGRDQVPDALKSILHKSKEGHQQDIQQLFLAYQNLLAAGGGVQKPPPEESHQHHLHHHHLHVPDFVKRIITEEQLLKMQQNNNGESEKLTRPSPSNSVITKIERPRSESDMEAEDSSSNVILKIPSFKPTSSKNGCDIFRSLEPTGSLISPPITTDSSNSPPAMPPKGGLYIKDMKDVIAQSISQKLQQEQQQQQQQQQQQPPRRPVLDIDFNRGGFTPPLGTGVSVIRTQQELGRQFQQQQQQQQQQQQQQQQQQHQQVKPSGSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRNTQDKLKQPLMKPPQKFPPTSPNGMKLPIFEPGMAPLGTYNPAPPPFPFWPHPGFSPLPLDYARNPSTPFPELFASQMMQKLQEESSRTLGASPQASTTASTVPSTTTPQALAKTARQMAESLLEAPGTSNGSFLDGIIRSSLESGVPVVGAADHHLHHHHHQRGGGASPVSGGGGGEGDDGDGVAAPGSSEEERNVSQMSNKALLDQLCRNSRLTPLSSRAAEGGSSSGDEATGRRGSPVNFSTGGGASHEEATLDEDSSSRHERADNNGDGTQSIDLSNDSDDHHHHHHHLQQQQQLQPPPAKQPRIYLKPDLVRPENLKPEMLVRFRDVLRNGLEGGEAEDDAPEQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00392676;
- 90% Identity
- iTF_00392676;
- 80% Identity
- -