Basic Information

Gene Symbol
JARID2
Assembly
GCA_946251935.1
Location
CAMIUL010000314.1:1125752-1134840[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-22 9.7e-19 67.9 0.1 6 89 1035 1116 1031 1116 0.93

Sequence Information

Coding Sequence
ATGTATTACACATTACAATTATTATTATTATCTAATATCTGTTTCAGCTCTCGCTTGACCAGGTCTGGCATCGTGATAGCTGCTAACAGACGAAAGCAGCAGAAGAGGATCATCATACCGGACCCCAAGACGATGGTCAAACCGAGGATCCTCCGTTCGACCACAATGAAGAAAACCGTCTTGTCCCGGAGACGGAGCAGAGTGCAGAAATCGAAGCAGAAATTGAAGACCGTACCGAAGGACAAAGTCCAAAACGCCCCGAAGAACGACGAGGAGGAAAAACCGACGAAACAGCCGCCGGGCGATATCAAGAGGGACTTCAAGAAAGTGACGGACTTCAAGAAGGAGTCTAACACTTTCTACGAGAAGGACAAGAAGCAGGTGAACAGGTCCCTGGATATCCGGAGGGAGATGAGCAAATCCACCGACATAAAGAAGAATATGAGCAAAGTCGTCCAGATAAAGCGCAGCGTCAGGATATCGAACGTCATTGAGAAACGAAACGTCGCCAGGAATCCCGTTAACGTTCCCGCGAAACAGAAAATAAACGAGACGAAGAAAGCAGAAGAAACGAACGTCAAGACCAACAAGAAACTGACCAAAAAACCCACTGACAGCCCGTCCCCGCAAACTAGATCCAAGAATAACCTCGCTGAAGAAAAAGAGGAAGATCCCAAGCCTAAAAGGGAAACGACCGATAACGCTAAGAAGAGCTCCGACAACATGAACTTGAGAAGTTCAAAGAAAGATAGTTCGAAGAAAGACAAGGTCGAACCTGCAAAGAAAAGGGATGATGAAAAACCACCACCACCGAAAAGTGAGAGTTCAAGAAAAAAACCTGACGGCCCGAAGAACGAAGATGAGCTGAAGAAGAAAGAAAAAAAGGAACCGCCAAAGAAGCAACAACTGGACGATATCCCAAAGAAAAAAGAAACCAATTATACCAAAGAGGAGTTGTCGAAAAAAAAAGAGGACGTACCAAAGAAAAAGGAAGAGGTGAACGAAGAAATCAAAGCTGAAGATACCAAACCCGTCGTTCCGTTGCCCGAGAAGGAGCCGGCGAAGATCGTACCAACGGCGAACCTCGAGCCGCCGACCAGAGAAGATCCGAAACCGGTCATGGTTCCGAAGGTCAACCAGAGACCGTCGAGGAAGACCAAACTCGCCGCCGCCATCTACATGGAGATCCTCAGCCACAAACTGGTCGACAGTAAAATCGACGACGACAACGTCTCCATAGACAGTTTCCCCGAGCTGCCCAACGTCAAGAGGACGGAACAGAGGGAGAACGAGCTGAAAGCGCAAGCGAAGAGGGACGACAAGGCGAGACCACTGAGCGGCGACGAGAGTGCCGACGACGCGTCGAACGAGGACAACCCATTGGTCATCGACGAGGACGTCGGCGTCGATGAGGAGGAGAAGGAGAAATCATCTGCTGGCGCCGCTCCCGAGGAGACCGCGAGGACGACGCGAAGGCTGACGAGGAACGCTCTGTCTCAACGCGGCCGCTCAGAGTCGTCTGAGGACGACTCCGATCAGTCGTTCTACGTGGACGTGAAGGTTCCGAGGAAGAAGAAGATGACGAGGAGCAAGGTGCCGAAACCGGTCGGGAAGGCGGACAAGCCAGAGTCGTCGAGCGAGTCGGACGAGTCGGTCAACCTGCAGATGTTGGTTGACATGCAGAAGTTTAAGAAGTTCTCCATTGCCAAGCTTTGGCACTGTAGAATAAAACTGTCGCAGGTGGCGAAGAAGCCGGACTCCTTCAGCGACTCGGACGAGGAGCCGTTATCGAAGCTGACGACGAAGAGCGTCGAGACGCACCTATCGAAGCGCGAGGAGGCCCCCGACGGCGGCGGCAAGGCCAAGTCGCAGGTCTCCAGGACGTCGGGCAGCGAGAAGCCGAAGCGGGAGTGCGCGAAGAAGCCGCAGAACTACCTGCCGATGTTCTCCTCGTCCGACGACGAGGACTCGTTCCACGGCTTCGACAAGAAGACGGAGGGCGTCGATGGCGAAGGGGCGTCGACGAGCGCCCTCCACCTGAACCTCCTCACGAAAGACGTCGACCGCAGGTTCGGCAAGGAGAAGGTGAACATGTCGAACGAGCAGATCGAGAAGTGGCTCAATGACTCCGCCCTCGCCGGCAACGGCATCAAGAAGGAGAACGACAACATGCTGAAGTTCGGCGAGAAGCTGCCCGTCGTCGACGAGGCGAAGGCGGCGAAAGCGTCGCCGTCGAAGGTCGAGCCGAAGGTCGTCGCGTCGACCGCCGTCGTCGCCGAAGAGAAGACGCCGGTGAAGTCGGAGAGCGTCGAGTCGAAGCAGACGAAGACGTTCGTCTCGGACAGGAAGCTGATCTTCCGTAAGAACAAGGCGGAGAACATGCCGAACGTGAACGCTTTCTCGCCGGAGAACGAGAGCAGCGTGTACGCCTTCGGGGAGGAGAGCGAGGAGCTGATCAACACGCCGTTCAGGAGGCCCTCGAGGAGGCCGTCGAGCACGGCGACGTCGCGGTCCGAGGACGAATCGTTGAAGCACGAGGATTCTACGAAAATAGGCCACTTCAGGAAGCCGACGCCGAAGGGTGGCGAGCCGGACCCGAACACCGACACGGACGAGACCTCGCACCAGTTCTACGTCCCGCAGAAGCCTACTAAGCTCAGCTTCCCGGCGAAGCCTCAGCAGAGGCCGAAGGCCCGCGAGAAGTCCTCCGACCCGGAGGACTTCAAGTACAAGGTGCCGAGCTCGCCGTCGGCGAGCTCCTCGTCGAGCACGAAGCCGCTCCGTAGGCAGGCGCAGAAGCCGAAAGCTCGACCGCCACCCGTCGACTCGGTGTCGCCCGTGTACACGTCAGACTTCCCGAAGAGGTCCGAGCAGGCGAGGCTCGTCGAGGCGCCGACGTTCCATCCGACCGAGCAGGAGTTCCAGGATCCGCTCGAGTACATCGAGCGGATCAGGCACAAGGCCGAGCAGTTCGGGCTCTGCAAGATCGTGCCGCCGAGCAGCTTCAAGCCCGAGTGCAAGGTCAGCGACGACATGAGGTTCACGGCCTACAACCAGTACGTGCACAAGATGCTGCACAGGTGGGGGCCCAACTTCAAGGAGCTGATGGCGATCAAGAAGTATCTCGAGACGCAGAACATCAGCGTCGCGCATACACCGTGGATCGGAGGGATGGAAATCGACCTGCCAAGGCTCTATCAGACCGTCCAGAACCTCGGCGGACTCAAGGAGGTGATCGAGAAGAAAAAGTGGCCGAAGGTGTCTGAGCTGATGAAAATCCCCAAGTCGGCACAGGATCGGGTCACCAAGCTAGACGACATCTACTGCAAGTATTTGTTACCGTACGACACCCTATCCCCAGCCGAGAGAGAAAAGCTTTTCGATGAGGTGGAGACCGACTGGGCCAAGAGAGAGTCGAAAGGCTTGCTGAAAGTGCAGGAGAAGAATGTGACTGACGACGATGATGATGAAGACAACGAGAGCGAGTTGGAGTCGGACGATAACGACGTGGAGGAGTGCATCACCAAAGGGCGGAACATGGCCCTGAATGGGTTCTACAGGATAGCTAGGAACACGATGAGCATGTACTTTAAGGTGCCAGAGCCTTCGGCCCAAGAGGTGGAACAGATGTACTGGAACTATGTGACGATGAGGGAGAATCACATCTGTGTCCATTCCGGTTCGATAGACTCCGGCAGCTGGGGGTACGGGTTCGCCGTGTCGAAGAATAGCCCTTTCGCCAGGCACCCGTGGAACCTCAAGGTCCTGACGAACAACAACGGGTCTTTACTGAGGTCATTAGGACCCGTCATGGGCGTGACCGTCCCGACCCTCCACGTCGGCATGGTGTTCAGCTCGTGCTGCTGGTACCGCGACCCGCACGGCCTCCCCTGGATCGAGTACCTGCACACGGGCGGCAGCAAGATCTGGTACGGCGTGCCGGACTCGATGAGCGAGAGCTTCCGCTCGACGCTCAGGTCGCTCGTGCCGAACTACTGTAGGAACACGGAGCTGTGGCTGCCCTCGGACACGGTCATGGTGCCGCCCGGCCTGCTCGTCCGGCACGGCGTCTCGCTGTCGAGGCTCGTCCAGGAGCCGGGCCAGTTCGTCGTCGTCTTCCCGAAGGCGTTCACGTCGAGCATCGGCACCGGGTACGTCGTCTCGGAGAGCGTGTACTTCGCGCCCGCCCATTGGCTGAGGACTGCGCGCGCCCTGTTCGACGCGCTGCGCGGCAGCTGCGAGCCGTCGATGTTCTCGCTCGACAAGCTGCTGCTGAGGATAGCGGGCGACGCTCGGTGCGGCGTCGACGTGCTGAGGCAGGTCGCGCCCCTCGTCGAGGAGTTGTGCTCGAGGGAGGCGAGGGGCAGGGAGAGGCTCCGTACGCTCGGGCAGGTCGAGAGGGAGAAGCTCGACGTGCCCGACTTGGGCAAGAAGAAGAAGAAGTTCCAGCAGGGCGACGAGGGGGACTACGAGTGCGACGTCTGTCGGATGAGCCTGTTCGTGTCGGTGGTGTTCGATTATCAAGAGACGGTGACGTATTGCCTGGACCACGCCGTCGAAGCGATCGAGACCAAGAAGGCGTCGGTGAGCAAACTGAAGCTGATGGTCGCCTACGACGACGAAGAGCTGGCATCGGTGCCGGACAAGGTAAGGGTCGCTATCGAGAACAAGCTCCAGAAGAAGGGCGGCTCCAAGTAA
Protein Sequence
MYYTLQLLLLSNICFSSRLTRSGIVIAANRRKQQKRIIIPDPKTMVKPRILRSTTMKKTVLSRRRSRVQKSKQKLKTVPKDKVQNAPKNDEEEKPTKQPPGDIKRDFKKVTDFKKESNTFYEKDKKQVNRSLDIRREMSKSTDIKKNMSKVVQIKRSVRISNVIEKRNVARNPVNVPAKQKINETKKAEETNVKTNKKLTKKPTDSPSPQTRSKNNLAEEKEEDPKPKRETTDNAKKSSDNMNLRSSKKDSSKKDKVEPAKKRDDEKPPPPKSESSRKKPDGPKNEDELKKKEKKEPPKKQQLDDIPKKKETNYTKEELSKKKEDVPKKKEEVNEEIKAEDTKPVVPLPEKEPAKIVPTANLEPPTREDPKPVMVPKVNQRPSRKTKLAAAIYMEILSHKLVDSKIDDDNVSIDSFPELPNVKRTEQRENELKAQAKRDDKARPLSGDESADDASNEDNPLVIDEDVGVDEEEKEKSSAGAAPEETARTTRRLTRNALSQRGRSESSEDDSDQSFYVDVKVPRKKKMTRSKVPKPVGKADKPESSSESDESVNLQMLVDMQKFKKFSIAKLWHCRIKLSQVAKKPDSFSDSDEEPLSKLTTKSVETHLSKREEAPDGGGKAKSQVSRTSGSEKPKRECAKKPQNYLPMFSSSDDEDSFHGFDKKTEGVDGEGASTSALHLNLLTKDVDRRFGKEKVNMSNEQIEKWLNDSALAGNGIKKENDNMLKFGEKLPVVDEAKAAKASPSKVEPKVVASTAVVAEEKTPVKSESVESKQTKTFVSDRKLIFRKNKAENMPNVNAFSPENESSVYAFGEESEELINTPFRRPSRRPSSTATSRSEDESLKHEDSTKIGHFRKPTPKGGEPDPNTDTDETSHQFYVPQKPTKLSFPAKPQQRPKAREKSSDPEDFKYKVPSSPSASSSSSTKPLRRQAQKPKARPPPVDSVSPVYTSDFPKRSEQARLVEAPTFHPTEQEFQDPLEYIERIRHKAEQFGLCKIVPPSSFKPECKVSDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLETQNISVAHTPWIGGMEIDLPRLYQTVQNLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETDWAKRESKGLLKVQEKNVTDDDDDEDNESELESDDNDVEECITKGRNMALNGFYRIARNTMSMYFKVPEPSAQEVEQMYWNYVTMRENHICVHSGSIDSGSWGYGFAVSKNSPFARHPWNLKVLTNNNGSLLRSLGPVMGVTVPTLHVGMVFSSCCWYRDPHGLPWIEYLHTGGSKIWYGVPDSMSESFRSTLRSLVPNYCRNTELWLPSDTVMVPPGLLVRHGVSLSRLVQEPGQFVVVFPKAFTSSIGTGYVVSESVYFAPAHWLRTARALFDALRGSCEPSMFSLDKLLLRIAGDARCGVDVLRQVAPLVEELCSREARGRERLRTLGQVEREKLDVPDLGKKKKKFQQGDEGDYECDVCRMSLFVSVVFDYQETVTYCLDHAVEAIETKKASVSKLKLMVAYDDEELASVPDKVRVAIENKLQKKGGSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00392540;
90% Identity
-
80% Identity
-