Ccet006578.1
Basic Information
- Insect
- Crossocerus cetratus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963675795.1
- Location
- OY776664.1:19740811-19743934[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.1 1e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 19 0.67 6.5e+03 -2.6 3.1 4 10 161 167 158 167 0.92 3 19 5.6e-08 0.00054 20.0 15.1 1 18 175 191 175 192 0.98 4 19 4.6e-08 0.00044 20.3 15.0 1 19 229 246 229 246 0.93 5 19 0.31 3e+03 -1.5 1.1 6 10 271 275 270 275 0.88 6 19 0.074 7.2e+02 0.5 9.3 2 19 282 300 281 300 0.89 7 19 8e-05 0.78 9.9 10.5 1 18 336 353 336 354 0.98 8 19 0.021 2.1e+02 2.2 10.0 1 12 388 399 388 399 0.94 9 19 1.9 1.8e+04 -4.0 1.6 6 10 409 413 409 413 0.95 10 19 7.8e-08 0.00075 19.6 12.0 1 18 419 436 419 437 0.92 11 19 1.1 1.1e+04 -3.3 0.7 6 10 465 469 464 469 0.85 12 19 0.0001 1 9.6 9.8 9 19 484 494 482 494 0.90 13 19 0.0019 19 5.5 5.3 1 11 504 513 504 514 0.95 14 19 0.86 8.3e+03 -2.9 5.8 14 18 546 550 546 551 0.89 15 19 0.00036 3.5 7.9 4.3 1 12 587 598 581 598 0.90 16 19 0.59 5.8e+03 -2.4 1.8 6 10 620 624 619 624 0.89 17 19 0.0092 90 3.4 18.6 3 19 633 649 632 649 0.92 18 19 2 1.9e+04 -6.4 3.0 9 13 655 659 655 659 0.70 19 19 8.6e-05 0.83 9.9 9.5 1 16 694 708 694 714 0.90
Sequence Information
- Coding Sequence
- ATGCAGAAGTTTCGCCGAGCGCAGGCACAGAACCGAATTGCCATTAACAAGCACTTGGAGGCGAACATCGAAGCGGAGTCGTCGAgcgacgatgacgacgagCAGAATGATGAGCAGATGCAGACGGTTGTCGGCAAAGTGCTGTCGGCTTACCAAGGCgaaggcgccgacgccgagaaGATTCTCTCTTATTTGATAAACACGTTTCAGTCTGGAAGAGCTGTCTGCCTGATTTGCATTTCTACTGTGAAAAAGGCTGATGCTATTTGGAACTGCCAACGATGCTTTGCTTTCTTGCATTCGTCCTGTATTCTTGATTGGATAAGGAACTGCTTGAACGACAAGCGAGAGAAGAACGTAGCCTTGGTTTGGGCATGTCCAAAGTGTCGAACCGAGTACAGTCAAGATGATGTTCCCCGAAGCTACCAATGCTTCTGCAAGAAAAGCATCGACCCCCAATATCAACCATGGTGCATTCCGCACTCCTGCGGGGAGACTTGCGGCAAAGCACTCCAGCCGAACTGCGGCCACAAATGTGTCCTGCTTTGCCATCCAGGGCCATGTCCGCCTTGCGCGAAGATGGTATCGGTCGCGTGTTATTGCCACAAGCAAATGCCGCGGCCGCGCAGGTGCAACGCAAAAGAGTGGAGTTGCGGCACAGTCTGTAACAATAGTTACAAATCCTGTTCGCACTCCTGCAAGGAGTTATGCCACCCAGGCGACTGTCCCCCGTGTACTGAAACGGTACTACTCGAATGCAGGTGCAAGAAGAATAAAGAATTGCGATGCTGCCACGAACAAGACTGGAGCTGCGAGCAGCCTTGTCGCAAACTACTCTCTTGCAAAATTCACATGTGCGAGGGAGCTTGCCACTCGAGCAGCGATTGCGGAATATGTCCGAAGGAGAAGAATCGAACGTGTCCCTGTGGCAAGAAACGCTACGCGATCTCCTGCAAGCAGGATCACGTACCCACATGCGGCGATACCTGCGCTAAATTGCTCGATTGCGGATCGCACTACTGCAACATGCGATGCCACCCTGACCGCTGCGGCCAGTGCGTCGAGGTAGTTAGAAAGTCCTGTAGATGTGGCTCGTACGCGAAAGAAGTACCATGCGCCAAGGAGTTTCACTGCAGTAAGAAGTGCTCGCAGATGCGGCTCTGTGGCAGGCACTACTGCCACAAAAAATGCTGCGACTGCTTAATCAAGAACACATTCAACGTCTGTGAGAAGACATGCGACAATACTCTGCCCTGCCGGAAGCACAAGTGCGCCGCACCCTGTCACAGCGGGCCCTGTTATCCTTGTGCGCGGACCGACGTTATTCAATGTCGCTGCGGCCGCAACAAGATCTCCGTGCCATGCGGCACCAAGAAGATCAAACCACCGGCTTGTAACAAGCCCTGTAAAATACCGCCGAACTGTCATCACCCAAAGCGAGAGACGCACAAGTGTCATCAGGGTCCTTGCCCACCTTGTAAAAAGGTGTGCAACCTGGTGTACAAGCGTTGCGGGCACAGTTGCGTTGCACCTTGCCACGCGAAAGTCTGGGTGAAGGAGAACGTCAACGGGTTTAATGCGGCGCCAGCTGGCCCGTGGGAAATCCAGAAGGTCACTAAGTCCTTGAAGACTCTGCCCTGTCCTCCCTGCGAAGTTTCTGTTCCGGTAACATGTCTTGGAGAACACGAAACACGACCATGGCCTTGCCACATGGCCAAGCGGACATCCTGCGAAAGAGAATGCGGTCGCACTCTTGCTTGCACGAACCACACATGTACAATAGTCTGTCATAGAGTAAATTCTACATTGGAGTCTCAAAACGGTGGCAAAGGCGACGCGGGTACTTCATGCATGGAGTGCGAGGAACCTTGTTCTTTCCCTAGGCCTCAAGGTTGCACACATCCATGTCCGAAACCCTGTCACCCAGCTCCTTGCAGTCCATGCAAGCAACTAGTCCGAGTTACGTGCCACTGTGGAATTGGCACCCTCTACAAGAGATGCGTAGAATTGACTTCAGCGACGAAGCAGCAACGCGACGAATTACTCGGATGCGGCAATCAATGTCCAAAGAATTATCCTTGCGGTCACCGGTGCATGAGCGACTGTCACCCAGGAGTCTGCGAGAACGCGGACAAGTGCAACAGGAAAGTCAAAGTTTTTTGCGCTTGCAAGAGAATAAAAAAGGACTTCATCTGCTCGGCGCTTCAAAAGCAGCCGGTTACCGTCGCCTGCGACGGTACGTGCGAGAAGTTGATTGCCGAAAGGGAGCAGGCGAAGGCTGCCTCACTTGAGCAGAAGCGAAAGGAGGAGGAATTACGAAATCAAGAGGAACTCGCGAGATTCGAGAAGAAGAACCGAAAGGGCAAGTCTCGCCGGCGTAGGGACACTGCGGACGCAGACTCCCTCGACAAGAATGCACGGAGTTACATGAAATACTGGATCCTATCTGTACTCATATGTATCGCAGGCTTCTTCACCTACTCCCTGATGGTTCAGTCCTAA
- Protein Sequence
- MQKFRRAQAQNRIAINKHLEANIEAESSSDDDDEQNDEQMQTVVGKVLSAYQGEGADAEKILSYLINTFQSGRAVCLICISTVKKADAIWNCQRCFAFLHSSCILDWIRNCLNDKREKNVALVWACPKCRTEYSQDDVPRSYQCFCKKSIDPQYQPWCIPHSCGETCGKALQPNCGHKCVLLCHPGPCPPCAKMVSVACYCHKQMPRPRRCNAKEWSCGTVCNNSYKSCSHSCKELCHPGDCPPCTETVLLECRCKKNKELRCCHEQDWSCEQPCRKLLSCKIHMCEGACHSSSDCGICPKEKNRTCPCGKKRYAISCKQDHVPTCGDTCAKLLDCGSHYCNMRCHPDRCGQCVEVVRKSCRCGSYAKEVPCAKEFHCSKKCSQMRLCGRHYCHKKCCDCLIKNTFNVCEKTCDNTLPCRKHKCAAPCHSGPCYPCARTDVIQCRCGRNKISVPCGTKKIKPPACNKPCKIPPNCHHPKRETHKCHQGPCPPCKKVCNLVYKRCGHSCVAPCHAKVWVKENVNGFNAAPAGPWEIQKVTKSLKTLPCPPCEVSVPVTCLGEHETRPWPCHMAKRTSCERECGRTLACTNHTCTIVCHRVNSTLESQNGGKGDAGTSCMECEEPCSFPRPQGCTHPCPKPCHPAPCSPCKQLVRVTCHCGIGTLYKRCVELTSATKQQRDELLGCGNQCPKNYPCGHRCMSDCHPGVCENADKCNRKVKVFCACKRIKKDFICSALQKQPVTVACDGTCEKLIAEREQAKAASLEQKRKEEELRNQEELARFEKKNRKGKSRRRRDTADADSLDKNARSYMKYWILSVLICIAGFFTYSLMVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00633996;
- 90% Identity
- -
- 80% Identity
- -