Ccet013303.1
Basic Information
- Insect
- Crossocerus cetratus
- Gene Symbol
- -
- Assembly
- GCA_963675795.1
- Location
- OY776668.1:19229718-19236265[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.026 2.3 9.0 0.4 2 23 844 865 843 865 0.93 2 11 1.4 1.2e+02 3.5 0.9 3 23 953 973 952 973 0.96 3 11 4.9 4.3e+02 1.8 2.4 3 22 1163 1182 1162 1182 0.95 4 11 0.015 1.3 9.7 0.1 3 23 1202 1222 1200 1222 0.96 5 11 0.17 15 6.4 0.3 1 22 1299 1320 1299 1320 0.93 6 11 0.023 2 9.2 0.1 2 23 1350 1372 1349 1372 0.90 7 11 0.01 0.9 10.2 0.4 1 23 1392 1414 1392 1414 0.98 8 11 0.13 11 6.8 0.2 1 20 1421 1440 1421 1442 0.92 9 11 0.054 4.8 8.0 1.5 1 23 1463 1485 1463 1485 0.96 10 11 0.0067 0.59 10.8 0.1 2 23 1674 1696 1673 1696 0.93 11 11 0.26 23 5.8 0.9 1 20 2076 2095 2076 2098 0.88
Sequence Information
- Coding Sequence
- ATGAGTTCACCGGACGATTGTTCCAGCAATGAGGGGCCCAGGGAAGATGTTGTGGACAATGTCAAATTCCTATCGAGCGCTTTGTGCACACCGGTCACAGTAGTGTTAACCAGACTCAGCGAGAATGAAATTGGGGGACAGCGCACTAAGATGAAGCGCAAGTGGAGACAGGGTCTTGTGTACCGGAAACGATACTCCAAGAATGTCGAGAAGAAAGCAACTGCAGTGAAGGTTCCGGAAGCTTccgggaggaaggagaggaggacggATGTTGGAGAGCGAGAAAAGCTTTATAGAAAGACTGATGGTAATAAAGAGAAGCCAAGTACGGAAGAGCTCAAGACTGGTGCATTGGTTGGTGGGGATGCTGGGCGAAGATTAAAAAAGCGGAAGAATATAGAGACTGTTGATAAGAAACTAAACATTCTACCTCGTAAGAGACTGAAGCGCTTGTCTGATGCAAGGAGGTTGAAGGAAGACACGGCGAACAATGTTGAGATAAGCACTGAATATAGAAAAGAAGACTGTATAAAACATATATTAAGTAATTCCAAACAATTACAAGTTTCCTTGACAAAATTGGAGAACATTAAGGATGATGAACAAGTAGATATTTGGAGGTCCAAATTATTAAGAACAAAGAGTCCAGCCTCTAGTTCTGTGATAGAAACAGAGAACAACAGGCGACTTTCTGATGCTTTAGGCTGTGTTGCTCTGCATTTAAATGACATTTATCCAAACAAGAAAACACATCAAACAGATTCTCCTGACCAATCCTCTGAAGAACATAAAACTAATTCCAGTCGACCATCCAGGCTTAGAGAAGTGAGAAAGAAGTCGTCAAAGGTTCACGGCACACTTAGAACCTCTGCGCGGCTGTCGCTTAAACTTTTGAAGGATCCACAGATAGCTTTGACACAATTAGGTGGTGGACAGGAACTTTCTCCAAAGTCGTCTTTAGTTACTAATACTGAATCTGAGAGTACAGAAGATCCGTCAAATCTTCAATTGGAAACACAACGAATATCTCGGAATGAAGAAGATGATCAGGATTTGATCGATGAAATTACATTATTAACCAATGCTGCCCAGGACAATAAAGAGTCCACCGCTGATCCTGGTAAAGCACTAAGCGTGCATTCAGCCGACGCTTCACCGAGGTCTTCGCCTATTTTGGGAAAATCTACAGCCAGACAGCTATTCAAATCAAAATCGAACTTGCAAAATATACAAAGCACTGTTGGCGAAACAATTGGCGAAGAATCGAGCGGTGGCATCAAAAGTGGAAGTACTAGACTGAAATCACCCGCAAAACCAAGCCGAAAGTCTTCTAAAACTACATCTGTTTCCGCAGAAGACGATAATGAAAAATCGGAAGATGTTGCTAGAGAATCCAGATTACATGAAAGTCCAGATGGTCCTTCAAGTAGAGTTCCAGTGAGATCAAAAAGTAGAGCCGCGGGTCGCGCGTCGAAGAAGATCTGGCCAAAAAGGGAATATGTGACGCGTTCTCTAAGCAGAATGGAGCGTCACTCACCCGGCAGAGGCTTGTCTTATTCTCCAAGCCCAGATGTGTGGATTGACTCGAGCAAAACGGCTCGTGCTCCGAAGAAATCAGCTCCCAGCCCTAGATCTCCGCTGAAACGTACTTCTAGTGGTGCCGTCGCTGATACTTCGAAGATAGCCGAAACCCGATCTTCAGATAAGGAATCGTCTCCAACTTCGAGTAGCGTCATATCCGTCGGTGTTGACGATCCAGCAGTAAATAAAAGCCCGGAGAATTCTCCAAGCGCGTCTCCTGTCCGTTCCACTGAGAATAATTTAATTACTTCATCAATTGAAGAAACCAGAGTTTCACCTAGCAAATTGGCGACAAGGTCGCTAGCTCGTCCTTCAATCCACAGTCCAAGTCGTCCACCGAGAACGCCGAGTTTCGTTTCGCCAAAGTCACCGATCAAGAGTTCTGTAACTCAGACGCACACATCTAATCTCAGCAAACAGCAAGAACCTGAAAAGACAACGTCTGACCCAGAAATTATCACAACCACCGGCACGAGTGAAGTTGAAGAGGCTCCTGCAGCAGTGGAGCCGGAGAAAGAATCTAATTTGATGTTAAGCGAAGATGAAGAGTCGATCCAACTGATCATCGACGACGATTCCACCAAAGGAGTCCCCAATTCAACATTAACCGCAGTGGCATTACCCAGCAGCAGTAGCGAACCCTCTACCGATCAGGACCAAGTTGTACCAATGCAAAAACCTGCTATACTATTTTCTCGAGCAAACACTGAGTCAAACAAGCCCGACGAGCATCAAGCCGGTGAAAATGGAGCCGACATCAAAAGAGCCACAAGTGTAGCACTAGCTCAACAATCTTCAATTTCGGATGTACTGAACAAGAAACAGAAGTCGGCAACACCGAATCTCTTACCCACCAGACGGAAGAAGTTGGCGGGCAGAGTGTCTCTGGGAAGAACGAAACCGGAGAAATTAAAGTCCAGATCAAAATCGAGGGGTACTCCAACATCTAAGTGCATCATATGCGATTCGGAGTATAAAACATACGAGCTCCTTCAAGAACACTTAAGAACTCATTCAAGAAGGCAAAGCCCATCCGCATCAGCACCTTCAACGTGCTCCAAAACAGCGTGCTCGGTCGCCTCATCTTCAAAAAGTAATCAAGAAACGAGGCCTCCAAGTACAGAAGTGACAGAGTGTGCCTATGAAACTTCTGACGTAACTTGCACGACTTCTACTCAGTCGCATCCTGACCCGAAAAAGCCAGAAAAATCTCCATTCTCAAAGTCAGTCAAAAGTAAAGAGAAGAGGTACAAATGCAGCAACTCTTCGAATGCCTGCAGCGTTTGTTGTCAAAAGTTCGAATCGAAAGATAAATTGGCTGGGCACATATTCGTGCATACAGAAGAAGAGCTTCAAAAGGCATACGAATTTGCGCGGGCAGCAAAAGATCCGGATAAACAGATTGAATCAGTTCGGATCACCCTGGAAGAATCGAGTCTGCACGACAACGTGGAAAGTAATACCAGTTCAACGACTGTTGGCCCTTCAAACATTGAAGTGCACGACCTCGATACGATACCTGAAACTACTCCAGTGGCTCAAAGTCGCTCGGACGACGGACGAAAGCGCGAAGAAGCGAGGACCAATTCAGAGAAGCAAAAGCAGGCTCGACAGGAAAACTTGACTCTCACCCCATCTGGAAGAGCAGCAGCTGCACGTAATACAGCAACTCCTTCGAAAGGGAAGCAATCTGAAAGGACAGACGTTGAGATAGAAGTAATCACTCTCGAAGATCCGGAGAGTCAAAACGTTACCACCGAAAATAATCAGCCGATGAGAACTGCCACGGATGAGAACAGTGAGCGCGACACGATAGTCGGGATCGCAAAACCGATCACCGTTTGTGAATGTCACAGGAACGACGTGACATACGGAAACTACTTAAGAATCGAAGTATCCCTGCTCTGTCATTCGTGCCGGACAGTTTATCGAAGCATGGAATGTTTCGAGGTGCATTATCGCTCACCGCAAAACGCGGAATGTAACAAGAATCGGTTGCATGGTAGATCGCCAAAACTATTCTGCACCAATTGCGGTATGATATTCAGTTCTATCCAAGATGTACGGCAACACCTGGAAGTACATGCCCGATACAACACAAATGTTTCGACCGACTTTCGGTGTAATCTTTGTAAAGTGATATTCGTAGGAATAGGATCGCTCTTCTACATTCATTGGTCGAATCACTTGAAGAATCCGCTATACATAGCCAGCAAACTGTCCTTCCCGAAGAACTCGGTACTAGCGCCAAGAAATAAACCCGTCAAGCCAAAGGACGGATCGAGCCTTGACGAGTATCTGTATGTAGCCGAGCATATTTGCGATAATTGCAAAAAGCCCCATAGTACTGCAGCCGATCTCGAGACACATCAGGAAACTTGTAAACAGGAGACAAGCAAGACGGCTTCAAAAAAAGCGGTAGCAAATCGCAACAATAACATAAAAGTGCAGCCGAAGATTCGACTTGTGTGCGGTATTTGTGATCAGATATTCCAGAACAAGGTTCTCTTCGAAAAACACGCTGAACTCAAGCATAAACGACATACCGAGCCACAATACATTTGCGTTGCACTGACCACCATGAGCACAGTATTCTCGTGCAGCGCTTGCACGAAGATGTACGGTAAATTGGAGGATCTCGAAACCCACTGGAAGACACACGACACCAAACAAGAGCGTTACATGTGCAAAAACTGCGACAAGCTTTACAACTCCTTGGAATCGTTCGTCGAGCACGCTAAGGAATACATATCGGACCAAAGCAACAGCGAGGTGTCGTGTAAGGTGATCTACCAGGAATCCGAATTCATCTGCAAACGCTGCAAGCTCGGATTCGACAGCAAAGTGACGATGAACAAGCACTTCGAGATGCACGGTGTGAGCTTAGCGTGGCGAAGCGCCGAGATAACTCGGCAACAACCGACCGACTTGCGAATGGGGGAAAGTCGCGCGGTAGACCCACTACAGGTACCAGAAAATCCCACTGAGAAGAcgatcgagagcgagcgcgtgaACAGTGTAGTTGCTGGAAAGCAAATGCAGGTGGAGCAGGAACGAGCGCCTTCAGCGAGGAGTGATAAACAAGTTTCTGATAGGAGCGAAGAGCCTTCCAATTACGGACAAGAGGAGGCAGAAGCTTCGGAAGGTGAGTTGGTGATAGATTATCGAGAGATGACAGAAAGCGATCGATTACAGAAAACACGCGAAAAACCCACCCCCTCGTCAACACCTGAGACCTTCAATACACCACCAACGACCACAGGAGCAACTGAAGACCTGGACAAGGATTGCACTGCCATTGCGCCTACCGACGAGGCCAGCAATCCTGCCAATTGCGCGGAGAAACTGCCGTCCCATAATGCCGAGCCGCCCAGAAAAGGTTTCCTGCGCGTGAAGACGTTGGCGGAATTGACCCAGGACAATATCAAAACACCGGATCAATGTTTTATTTGCAATACAGTTCTAAGCAGCAGCGATGAGTTAGTAAGCCATATTCTTGCCACACACGCAAACATCTCTGCTGCGCAAATTGCGATGAACCGATCAGTAGGGCAGGGTTCTCTGCCAAACACGTCCCAGCCACCTGAACCAAGGCAAAATATTGCCAGCACTACAACAATCCGACAGATCCACGCGGAATTACCCAATACAACTGAACCCCAATCAATGCTCTTAATCAACGGGAGTATAATAGCGCTTGGGGTACAGGCAAACCCGACTGCGACAGCCCAGCAACAAAAGCCAACGTGGCACACGAGTGAGGATCGACCTAAGCTTGCCAACATTGCCCCGAAACCGGTGTCCGGCTACCACAAGAATCTTCCAGCCTGTCCTTCGACACGGCCGCTCTCGTCGGCGACGCAACGTGCTCCTCCTCGCAATCCTCGCGTGGTCGCTTTCCGGCCGAAAGACAGGACCAGTAACTCGCCAATCTTAAGGATACCGCAACCCGCGGCAACCGGGCAACCCCAACAGTCATATCGTACGACAATATACCCGCAGAGTCAGCAACGATTAGTTTCAAACCAGTCAACGTCCAGTGCCAGCAATCTAGTGTTAACATCTAAGCAGAGTATTCCAAGTACAGCAATACAACTAGCGGATGGGTACAGTTGTAAGATTTGCCCTCAATTCAAGGGGGCCTCCGTGGCCGACTATCTTTTACACGAATTATCGGAAGAGCACGAGGCTCGCAAGAGACCACCCGCTCCGCAAACTGCCACTGTGCAGAATCAACCGTACAACAATTACCAGCAGCTAGTGGGAGTTCCTACTGCGAGTGTACAAACGGCAACTATAAATTCAGGAACTGTCATACAGAACCACCAGCCGCAGGAACAACTGCAACTATACACGACGGAAGTCTACGGCGAGCCACTGACGTACACACCAGTGGCAACGAATCAAATAATTGACTATACAGTACCCAGCAATGCATTCGTCAATGCTACCAGCATATCGCAAGCTGCGCCTTTGAATACTCAGATACTGATAGCTACGCCCAGTCCGAGAACCGTTTACCAACCACTTATTTTCAATAATTCGTCCGGCATGGCTGTTATGAATAATGGCACGTGCTATTTCTGCGCAGCTCCCTTCGCTAGTGACAACATATTGCGCATGCACATAAACGTCAAGCACCCTTACGCGTGCATACTGTGCAGAAAAGACTTCACCAGTCCCCAAGAATTGCAGGCGCATAAAATCTGCCACCGCCTAACTTGGGGCTGA
- Protein Sequence
- MSSPDDCSSNEGPREDVVDNVKFLSSALCTPVTVVLTRLSENEIGGQRTKMKRKWRQGLVYRKRYSKNVEKKATAVKVPEASGRKERRTDVGEREKLYRKTDGNKEKPSTEELKTGALVGGDAGRRLKKRKNIETVDKKLNILPRKRLKRLSDARRLKEDTANNVEISTEYRKEDCIKHILSNSKQLQVSLTKLENIKDDEQVDIWRSKLLRTKSPASSSVIETENNRRLSDALGCVALHLNDIYPNKKTHQTDSPDQSSEEHKTNSSRPSRLREVRKKSSKVHGTLRTSARLSLKLLKDPQIALTQLGGGQELSPKSSLVTNTESESTEDPSNLQLETQRISRNEEDDQDLIDEITLLTNAAQDNKESTADPGKALSVHSADASPRSSPILGKSTARQLFKSKSNLQNIQSTVGETIGEESSGGIKSGSTRLKSPAKPSRKSSKTTSVSAEDDNEKSEDVARESRLHESPDGPSSRVPVRSKSRAAGRASKKIWPKREYVTRSLSRMERHSPGRGLSYSPSPDVWIDSSKTARAPKKSAPSPRSPLKRTSSGAVADTSKIAETRSSDKESSPTSSSVISVGVDDPAVNKSPENSPSASPVRSTENNLITSSIEETRVSPSKLATRSLARPSIHSPSRPPRTPSFVSPKSPIKSSVTQTHTSNLSKQQEPEKTTSDPEIITTTGTSEVEEAPAAVEPEKESNLMLSEDEESIQLIIDDDSTKGVPNSTLTAVALPSSSSEPSTDQDQVVPMQKPAILFSRANTESNKPDEHQAGENGADIKRATSVALAQQSSISDVLNKKQKSATPNLLPTRRKKLAGRVSLGRTKPEKLKSRSKSRGTPTSKCIICDSEYKTYELLQEHLRTHSRRQSPSASAPSTCSKTACSVASSSKSNQETRPPSTEVTECAYETSDVTCTTSTQSHPDPKKPEKSPFSKSVKSKEKRYKCSNSSNACSVCCQKFESKDKLAGHIFVHTEEELQKAYEFARAAKDPDKQIESVRITLEESSLHDNVESNTSSTTVGPSNIEVHDLDTIPETTPVAQSRSDDGRKREEARTNSEKQKQARQENLTLTPSGRAAAARNTATPSKGKQSERTDVEIEVITLEDPESQNVTTENNQPMRTATDENSERDTIVGIAKPITVCECHRNDVTYGNYLRIEVSLLCHSCRTVYRSMECFEVHYRSPQNAECNKNRLHGRSPKLFCTNCGMIFSSIQDVRQHLEVHARYNTNVSTDFRCNLCKVIFVGIGSLFYIHWSNHLKNPLYIASKLSFPKNSVLAPRNKPVKPKDGSSLDEYLYVAEHICDNCKKPHSTAADLETHQETCKQETSKTASKKAVANRNNNIKVQPKIRLVCGICDQIFQNKVLFEKHAELKHKRHTEPQYICVALTTMSTVFSCSACTKMYGKLEDLETHWKTHDTKQERYMCKNCDKLYNSLESFVEHAKEYISDQSNSEVSCKVIYQESEFICKRCKLGFDSKVTMNKHFEMHGVSLAWRSAEITRQQPTDLRMGESRAVDPLQVPENPTEKTIESERVNSVVAGKQMQVEQERAPSARSDKQVSDRSEEPSNYGQEEAEASEGELVIDYREMTESDRLQKTREKPTPSSTPETFNTPPTTTGATEDLDKDCTAIAPTDEASNPANCAEKLPSHNAEPPRKGFLRVKTLAELTQDNIKTPDQCFICNTVLSSSDELVSHILATHANISAAQIAMNRSVGQGSLPNTSQPPEPRQNIASTTTIRQIHAELPNTTEPQSMLLINGSIIALGVQANPTATAQQQKPTWHTSEDRPKLANIAPKPVSGYHKNLPACPSTRPLSSATQRAPPRNPRVVAFRPKDRTSNSPILRIPQPAATGQPQQSYRTTIYPQSQQRLVSNQSTSSASNLVLTSKQSIPSTAIQLADGYSCKICPQFKGASVADYLLHELSEEHEARKRPPAPQTATVQNQPYNNYQQLVGVPTASVQTATINSGTVIQNHQPQEQLQLYTTEVYGEPLTYTPVATNQIIDYTVPSNAFVNATSISQAAPLNTQILIATPSPRTVYQPLIFNNSSGMAVMNNGTCYFCAAPFASDNILRMHINVKHPYACILCRKDFTSPQELQAHKICHRLTWG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -