Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776662.1:25057516-25063470[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.66 58 4.6 0.1 2 21 180 199 179 200 0.94

2 23 0.091 8.1 7.2 0.9 1 19 207 225 207 228 0.94

3 23 0.031 2.7 8.7 2.5 3 23 240 261 239 261 0.92

4 23 0.00019 0.017 15.7 4.8 1 23 583 606 583 606 0.93

5 23 0.2 17 6.2 1.3 5 23 613 632 612 632 0.94

6 23 9.5e-05 0.0083 16.6 1.8 2 23 639 660 638 660 0.96

7 23 0.36 32 5.4 2.1 3 20 689 706 687 708 0.89

8 23 0.003 0.27 11.9 0.1 2 22 842 862 841 862 0.94

9 23 0.022 1.9 9.2 1.4 1 23 869 892 869 892 0.96

10 23 0.61 53 4.7 4.6 3 23 904 925 903 925 0.94

11 23 3.3 2.9e+02 2.3 0.1 3 19 950 966 948 969 0.88

12 23 0.2 17 6.2 4.7 1 23 976 999 976 999 0.93

13 23 0.046 4 8.2 5.0 1 23 1010 1033 1010 1033 0.94

14 23 0.0042 0.37 11.5 0.1 1 19 1072 1090 1072 1092 0.95

15 23 0.0024 0.21 12.2 2.8 1 23 1100 1123 1100 1123 0.92

16 23 9.8 8.6e+02 0.9 1.3 1 22 1132 1153 1132 1155 0.80

17 23 0.041 3.6 8.3 0.1 2 20 1199 1217 1198 1218 0.94

18 23 0.014 1.2 9.8 1.5 1 23 1226 1248 1226 1248 0.98

19 23 0.04 3.5 8.4 2.4 1 23 1258 1281 1258 1281 0.94

20 23 0.57 50 4.7 0.1 1 21 1457 1477 1457 1478 0.93

21 23 0.23 20 6.0 1.9 1 23 1485 1507 1485 1507 0.94

22 23 0.024 2.1 9.1 4.5 1 23 1519 1542 1519 1542 0.95

23 23 0.019 1.7 9.4 0.1 1 23 1705 1728 1705 1728 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.66	58	4.6	0.1	2	21	180	199	179	200	0.94
2	23	0.091	8.1	7.2	0.9	1	19	207	225	207	228	0.94
3	23	0.031	2.7	8.7	2.5	3	23	240	261	239	261	0.92
4	23	0.00019	0.017	15.7	4.8	1	23	583	606	583	606	0.93
5	23	0.2	17	6.2	1.3	5	23	613	632	612	632	0.94
6	23	9.5e-05	0.0083	16.6	1.8	2	23	639	660	638	660	0.96
7	23	0.36	32	5.4	2.1	3	20	689	706	687	708	0.89
8	23	0.003	0.27	11.9	0.1	2	22	842	862	841	862	0.94
9	23	0.022	1.9	9.2	1.4	1	23	869	892	869	892	0.96
10	23	0.61	53	4.7	4.6	3	23	904	925	903	925	0.94
11	23	3.3	2.9e+02	2.3	0.1	3	19	950	966	948	969	0.88
12	23	0.2	17	6.2	4.7	1	23	976	999	976	999	0.93
13	23	0.046	4	8.2	5.0	1	23	1010	1033	1010	1033	0.94
14	23	0.0042	0.37	11.5	0.1	1	19	1072	1090	1072	1092	0.95
15	23	0.0024	0.21	12.2	2.8	1	23	1100	1123	1100	1123	0.92
16	23	9.8	8.6e+02	0.9	1.3	1	22	1132	1153	1132	1155	0.80
17	23	0.041	3.6	8.3	0.1	2	20	1199	1217	1198	1218	0.94
18	23	0.014	1.2	9.8	1.5	1	23	1226	1248	1226	1248	0.98
19	23	0.04	3.5	8.4	2.4	1	23	1258	1281	1258	1281	0.94
20	23	0.57	50	4.7	0.1	1	21	1457	1477	1457	1478	0.93
21	23	0.23	20	6.0	1.9	1	23	1485	1507	1485	1507	0.94
22	23	0.024	2.1	9.1	4.5	1	23	1519	1542	1519	1542	0.95
23	23	0.019	1.7	9.4	0.1	1	23	1705	1728	1705	1728	0.93

Sequence Information

Coding Sequence: ATGGCCCGAGCACTGATCTATGAAAGAGGAGTTCATTCCATTGTTGCTGATAATACCTTGTATGAGAAACTTAATTCTCTGGAAAATGAGGTGAAGATCAAGGAAGAGCCACCAGATCCAGATAGCGACTACACAAACAATGAAACAACATCGCCTCGAGAAGACAATGTGAGTTATACTTGCGATGAGAAAGCAAAACCAACTGTGACAACAAGTTCTTCCTTAAACAACAAAGAAAATGAGTGTGTGTCGAAAAAACTTGTGTTGAAGAAAAAGCGGAGGTCTGGTGATGGATACACAAAGCGCAGAAGGGCAAAGCGATCCAAGTCTAAAACTGAGTATGCCGAAGGCCGTGTACGCAGTGAGGATAAACAATCGAAAGGCACGGCACAACATTCAAACCAATCTGCCAAACCAACAAAAGAAGGCAATAATTTGGTTAAAACGAGTGACCATCTGCAACAATCCAATTTAACTAAGCAGAATGTAAAACCCAAGAGGGAGAAGAAATGGCAGCTGGAAGAGGAGAATGGATTGCAGTGCAATATATGCTTTTTACCAATGAAAAATATTGCGCAACTAGAGCGGCATCAACAATTACGATCTCCTGGAATTCTGTATCCATGCAAGAAGTGTAAAacattatttgccgataagcGCAGTTTTACTTACCACGGTGAAAGTTGTAAAGGGAAGAGACAAGTGCAAGATGTTGCCTGTAATTTTTGTAAGAAATTTTTTCGAACAAAATACATTTTACAAGCACACATATTTCATGTGCATTCGGATAAAATATACCAACCAGATTCAATTAAAATGAGCCCAGAACCACCAAAGTGGCTTACAGGTTCACCCAAATCAAAAGGACCAACGACATCCAGAAGCAGATCTAGCTTGCCAAAGATACCTTTGAATATTTCTTGTGTTTCAACAAAATCACCAAGTGGACAGGTCGACCAAAATCGAACCAGCCCACAAACTTCCAATGTCAGCAAAAATGATACTGCTGATGCATCAACCAATGAACCACTAATTACTCCTGTGAAAAAGATGCGGCAGACGACACTTATGGAATTTCTTACACTTTCCGGTAAGAAGGTAGAGAGTCTTCCATTGCAAAAGAATGAAGCCACTGGAACAGAGTCCGTCAAGAGCACTGGAAATAGCAGAGTGTGTCCTGATAAGACTCCAAGGCCTTTCGTCCAGATACACACTAATACGGCGGTAATGATGGAACTATTAAACAGTTCAAGACACGTCAAACAGGAGCCATTGGACGACGAGGTTCGATGTATCACGGCCAGACAAAGTACCCCATACAGTCTTCGACCAACGCGACCAGCAGTTTACACGCCAGATACTTTTTCCTATTTGGACTCCTCCATAAAACGTAAGAGAATATATTCTGAAGTGGAGAGGGTGTCGGATGAAAATGAATGTAACACACCGAAAAGGACAAGACAAGAAAGGCGAATAAATGACAACAAATTAAAAGCGATGTTTGGCATTAAAGAATGCTACGTTCACCTAGTCAGATATGATTCCATTAACAAAATAATCGAGTCGGTTTCCCAAGAGGATGGAATGTTAGAAGTTCCACAGGAAATACACGACCCAACTGTTCCTTTGAAGAGTCTTCAAGAACCAGGATTACAACAGTTGAATGGGCCAAGCATAGAAGCAAATCAAGAAGTGAAAGCGGAGCACCAACCCGAGAAAAGTGGCTTAAAATCCAATAGCAAGCCATACCACTGTAAGATATGTACCAAACGGTTCTCCTCGAAGAAGAATTTAAATGAACATAAGGAATTGTTTCACATAGCATACATATCTAGCATATGTAATGCACGCTATACTTCAAAGTATAAACTACTTCACCATTATTTGCGGCAACATACAATATTCAAGCGAACTGTGTGTTGCGTCTGCAGAGAGAGCTTTAGCAGCCGTTCGCTTCTTCAGCGTCATTTACTTATTCATTGCCTTAAAGTGTTACGTGGTAAACATGACCGCTTTCCAGTGGATGTTATCATGAAGTGTAATGCTTTCCAAAAGAACCATTTGTGTTCCAAGTGTGGGAAACGATTTTGGTTGTCTTCCTGCCTGACACAGCATGAGAATATATGTTCTTCTCGGACTTGGAAAGACAGTCAAAAAGTCTCTTCCACTGACGCAAAGTCTATTACCCCACCAAGTAGTGAAGAGTCCCACGCCAATGACAAATTATTAACTGAGAATTACTCATCGGTAACGCAGTCTCCAAGCAAGTCTGTCTCAAAGGAGTCCGCAAACAACAAAGAAGTCCCATCAACAGCGACACGAACGGAAGCACAGACTCCAAAGAAACCAGCCAATGAAGTGTCGCCGAGGGTTTCAATTCCTACAGTTGAGCAGCATCGGCCCAGCAAAAATACGAAGATTAGTCCTGAAATCAAAAATAAGTCTGCTGAAAGCCAAGCAGAGAAAGTAATTGTGACACCTGCAAATATCACACCATCGCTCACGTCCGTCGTTACTAATGTCGAATGCCCCGTGTGTAATATTAAATTTAGCAACATAACAAAGTTGAATAATCACACCCAAACTTATGGAGGAGAACTAAACCACCAGTGTAGCGTCTGCTCACTTGCCCTGCCGAATAAACGGCTTCTTGAACAGCACATACATATGACTCATACCCAAAACTACCTAGGAAAACACAGAAACAACTGCAAATTCTGTAATCAGGCTTTCAACAGTGCAGACCACCGACAGATACATGAGAAGCATTTCCATCCGTCTCAAATTATAGTTGTTCCCGAACAAACTTGGCTGAATGAGGAACAAGTTTGGAACGTTAATACCGCCTGCAACACGTGCAACGTAGTCTTCGAAAGTTACGACAGATTCGTCGAGCATAACATGTATTATTATAAAGGGCAATCGTTCACTTGTACATTCTGCGGCCAAACCTTCGATGGATTGTACATGTTTCACCATCACAGCAAACTAGTCCACTATCCCGAGGCTACCCGGAAATCTTACGCCTACACCTGTGATTCTTGCAACGAAGGTTTTAACCAGGAATCACATTTCCACGCGCACAAGCTACACGTCCACTCGAGCGAGTCTTCGCAGTTGTTGGCGGCTTCGTCGCAGGAACATACAAGTGGTTCCTCCATAGAAATCACCTCCGTACCTACTATAGAATGTAGGCAAATTGCCTTCGCCATTTATGCCTGTAACATTTGTCAAATGTTCTTCACGAACGAGACGGATCTTATTGCCCATGAAACCGAATATTCACTTAACGGCAAGTATCTTTGTAATGGATGCGACAAGAGATGCCGGACGATCTCGCTGTTAAAGCAGCATTATTCCCTGAATCACATAGGACCGTCCGTTGCAAGTGCGTACAAATGCAAACAGTGTATGGAAGTTTTTATTGCTGCTTCCGCATTAGTCTGCCACGAGAAACATGTCCATCCTGAAGAAAGTAGTCAGCGATATGAGCTGATTGCTGCTCTCGAGCAGAATGTCGATCGGGCCATCGGGGCAAGGAAGCCCGAACGGCTCGATCCGGCTAGCGGCGGGAAGCCAGACTCCGAAAGTCTAAAATGTCTAGTATGTGGTATGACATTTGAGAAAGAGATAGATTTACGAGAACACTTGTTCGCGAACTCAAACATTGGCGAGTACAGTTGTGCGGTTTGCCATCGGAAGTTCGCCGAGCCGGCGCGCCTCTACCAGCACAAGATGAAGCATTCGAGAATTAATACCATCCTCGCTGAACACCATTGTCCTATATGTCAAGAAGGGTTGACCAGTGCCACCAATGTAAGAATCCACATGCTACACTTTCACGGATACGAAAGCTTTCAAAACATCCTCGCTAAACGTGGCTGCTTGTCTACCAGACGCCTACTTGATAATCTAACGAACACTGTGGACAAAGACACTGATCAAGCCCCGACACCAGAACCTATCTCAGAGGATATTGTTAATGATAATTTAGACGCACCTGTGGATCTTTCTAACAGGGACACTGAGAGTACCTCCAATACTGCGGTGGAAAATAATTCTGATGTTTTTAATGAGGCGAGCCTTAATGGGCATGAGCTAGGGAAAGTCACATCTGTTGTGATATCCAACACTAGTGCAGAGCCTGAGAACGATTGTTTTATTCTGGAAGTGCCCGCTGACTCTAATGCAGATAGTAGCTTTAATAAGCTGATTTTGAATTCCGTGATAAAGTATAAACCTAGTGCGGAAGCTGTACAACCACAGCGGAAAAAGAAGACGGTGGTTATAGATTCGCAAGGCCAGAGTATAACCAACTTGCTTAAGGCTCTGATGACTCTAAAAGATGAGCCATCAGACGATGAAGAGTACCGTTGTGCCGAATGCAACATCAGATCTAATAGCCGGAGGAGTATGGTGTTGCATATCATCAAGTACTTAAACCGTGGCAGTTACGTGTGTGACATTTGCCCACGACGATTCCCTTGCGATGCTTTCTACCAAGAGCACCGTCGTAAACACCAAAGAATTGATGAAGGCTCCACCGAGTACCGATACACTTGTCAATACTGTAACGAATGCTTCCGGACAGCGACGGCAGATCGTGCGCACATCAGGCATTTCCACAAGGACAAAGATCTGGCAAATACCATTAATAATAACCAGCGGTCTACAATTAACTCAACCGATCAGCCAAAGCAGCGGGAAGTAAAGACCATTGAACCGGTTGCGAACGATCAGCCATCCACAATAACTCAACCTCAACGGCCGAAAGCACCTTTGCAATCCGAGAGCACAACACACGTACCGGAACTCGATTCCACTGAAGGGGTAGAAAGAGTCCAAAACGAGATGAAGCCGAATCTAAATAAGGAAGCTAAGACTGACGCTGGGTCTGCTACTGCAGCAAAGGCAATCTCTACTTCATCGAAGAAGACCTCCACAGGCTTGGGTTTTTCCTGTTACTCATGTTGCATGTCTTTTGAGAATTTCTTGCCATACCATGCACACTGCAGAACGGAACACCCGCAGGGAGTAATTGTGATGGACCCCACCACCCCGAATCAAGTGTCTACGAGTAATACTTCGTCGAATTCAGATGTAACCGCCAATTTCAAATGTAATATATGCAACATTCCCATCGACAATGCGGTCTCTTTGAATAAGCACTCGAAGGACGTTCACACGGAAGGTTCAAATGTAAGTAACAATGATATCAGCCCTACCGAGAATGGCTCCGAGGATCTGAAAATTGTGTGGGAAAAGAAACCAGAGCCCAAACTGAGTCAGGATTTTCATGCTGCTTTGCAGAAAAATCTAGCGATTGTCCATGGAGTCGCAAAGGAACCAAACGTTACGGAAAGTACTCCTAGATTAACAGTAAAGCCATTCGCCAAGATTATCGAAACTCTCACGATCGAGACCCAATTGGAACCACCGCCGAATATCGATAATGAAATACGAGAGACTGAGCAGGAAATTGTTACTGAGGCTAGTTCCAGCCAGCCCATGTAA
Protein Sequence: MARALIYERGVHSIVADNTLYEKLNSLENEVKIKEEPPDPDSDYTNNETTSPREDNVSYTCDEKAKPTVTTSSSLNNKENECVSKKLVLKKKRRSGDGYTKRRRAKRSKSKTEYAEGRVRSEDKQSKGTAQHSNQSAKPTKEGNNLVKTSDHLQQSNLTKQNVKPKREKKWQLEEENGLQCNICFLPMKNIAQLERHQQLRSPGILYPCKKCKTLFADKRSFTYHGESCKGKRQVQDVACNFCKKFFRTKYILQAHIFHVHSDKIYQPDSIKMSPEPPKWLTGSPKSKGPTTSRSRSSLPKIPLNISCVSTKSPSGQVDQNRTSPQTSNVSKNDTADASTNEPLITPVKKMRQTTLMEFLTLSGKKVESLPLQKNEATGTESVKSTGNSRVCPDKTPRPFVQIHTNTAVMMELLNSSRHVKQEPLDDEVRCITARQSTPYSLRPTRPAVYTPDTFSYLDSSIKRKRIYSEVERVSDENECNTPKRTRQERRINDNKLKAMFGIKECYVHLVRYDSINKIIESVSQEDGMLEVPQEIHDPTVPLKSLQEPGLQQLNGPSIEANQEVKAEHQPEKSGLKSNSKPYHCKICTKRFSSKKNLNEHKELFHIAYISSICNARYTSKYKLLHHYLRQHTIFKRTVCCVCRESFSSRSLLQRHLLIHCLKVLRGKHDRFPVDVIMKCNAFQKNHLCSKCGKRFWLSSCLTQHENICSSRTWKDSQKVSSTDAKSITPPSSEESHANDKLLTENYSSVTQSPSKSVSKESANNKEVPSTATRTEAQTPKKPANEVSPRVSIPTVEQHRPSKNTKISPEIKNKSAESQAEKVIVTPANITPSLTSVVTNVECPVCNIKFSNITKLNNHTQTYGGELNHQCSVCSLALPNKRLLEQHIHMTHTQNYLGKHRNNCKFCNQAFNSADHRQIHEKHFHPSQIIVVPEQTWLNEEQVWNVNTACNTCNVVFESYDRFVEHNMYYYKGQSFTCTFCGQTFDGLYMFHHHSKLVHYPEATRKSYAYTCDSCNEGFNQESHFHAHKLHVHSSESSQLLAASSQEHTSGSSIEITSVPTIECRQIAFAIYACNICQMFFTNETDLIAHETEYSLNGKYLCNGCDKRCRTISLLKQHYSLNHIGPSVASAYKCKQCMEVFIAASALVCHEKHVHPEESSQRYELIAALEQNVDRAIGARKPERLDPASGGKPDSESLKCLVCGMTFEKEIDLREHLFANSNIGEYSCAVCHRKFAEPARLYQHKMKHSRINTILAEHHCPICQEGLTSATNVRIHMLHFHGYESFQNILAKRGCLSTRRLLDNLTNTVDKDTDQAPTPEPISEDIVNDNLDAPVDLSNRDTESTSNTAVENNSDVFNEASLNGHELGKVTSVVISNTSAEPENDCFILEVPADSNADSSFNKLILNSVIKYKPSAEAVQPQRKKKTVVIDSQGQSITNLLKALMTLKDEPSDDEEYRCAECNIRSNSRRSMVLHIIKYLNRGSYVCDICPRRFPCDAFYQEHRRKHQRIDEGSTEYRYTCQYCNECFRTATADRAHIRHFHKDKDLANTINNNQRSTINSTDQPKQREVKTIEPVANDQPSTITQPQRPKAPLQSESTTHVPELDSTEGVERVQNEMKPNLNKEAKTDAGSATAAKAISTSSKKTSTGLGFSCYSCCMSFENFLPYHAHCRTEHPQGVIVMDPTTPNQVSTSNTSSNSDVTANFKCNICNIPIDNAVSLNKHSKDVHTEGSNVSNNDISPTENGSEDLKIVWEKKPEPKLSQDFHAALQKNLAIVHGVAKEPNVTESTPRLTVKPFAKIIETLTIETQLEPPPNIDNEIRETEQEIVTEASSSQPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -