Basic Information

Insect: Crossocerus cetratus
Gene Symbol: salm
Assembly: GCA_963675795.1
Location: OY776663.1:243804-253101[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.8e-06 0.00042 20.7 0.9 1 23 410 432 410 432 0.98

2 9 9.5e-06 0.00084 19.8 2.1 1 23 438 460 438 460 0.98

3 9 0.06 5.3 7.8 3.8 2 23 857 878 856 878 0.98

4 9 4.1e-08 3.6e-06 27.2 0.6 1 23 884 906 884 906 0.97

5 9 5.8e-05 0.0051 17.3 2.6 1 23 916 938 916 938 0.98

6 9 0.002 0.18 12.5 1.9 2 23 1252 1273 1251 1273 0.97

7 9 0.03 2.6 8.8 1.4 1 14 1279 1292 1279 1293 0.92

8 9 5.6e-07 4.9e-05 23.7 2.1 3 23 1482 1502 1480 1502 0.96

9 9 1.9e-07 1.7e-05 25.1 0.9 1 23 1508 1530 1508 1530 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.8e-06	0.00042	20.7	0.9	1	23	410	432	410	432	0.98
2	9	9.5e-06	0.00084	19.8	2.1	1	23	438	460	438	460	0.98
3	9	0.06	5.3	7.8	3.8	2	23	857	878	856	878	0.98
4	9	4.1e-08	3.6e-06	27.2	0.6	1	23	884	906	884	906	0.97
5	9	5.8e-05	0.0051	17.3	2.6	1	23	916	938	916	938	0.98
6	9	0.002	0.18	12.5	1.9	2	23	1252	1273	1251	1273	0.97
7	9	0.03	2.6	8.8	1.4	1	14	1279	1292	1279	1293	0.92
8	9	5.6e-07	4.9e-05	23.7	2.1	3	23	1482	1502	1480	1502	0.96
9	9	1.9e-07	1.7e-05	25.1	0.9	1	23	1508	1530	1508	1530	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGGTGGAGCATCACGCGACGCCTCGAGTCGAGGGGCATCAAGCAGCGACAGGAGAACTGCCAGGCACCAAGGATACCCTGCCGCAGGATCTCCGGCGAGGAGAATGAGTACACATCGGAGGGCGAGGAAAGCGGCGTCGGAGGCGGAGGTGGCGTCGTCgtcggaggcggcggcggcggcggcgtcgtttCCGGTGAGGAAGCAGTGGACCTCACAGCTGCCCGATCACACCAgggcgacgaggacgagaaggagcaggaggacgcTCTCGAGGAGGACGAAGAGGAGGGCGTCGACGAGCAGGACGAgcaggacgaggacgaggagggtTCGCGGAAGCAGATCCGGCACCGGCAGGACGCCGAGAACAACAACAACTTCGTGGAGAGCGGCACGGCCAGTGGGATCTTCGCGCCAGCCGGCACGAGTCACGTCACCCTGGAGGCTCTGCAGAACACGAAGGTGGCGGTGGCCCAGTTCGCGGCGACCGCCCTCGCCGACGGCGCCGACAGCGAGGCCGCCCTCCAGGACTTGGCCCTGCTGCAGAGCACCCTCTACACCCTCCAGCACCAGCAAGTCTTCCAGCTCCAGCTGATCAGCCaactccagcagcagctctcgATCACGCACGGTCAGGTGGGCGGTCAACAATCGGGCGCCGGTGGCGAGGCCTCCGACAGGAAGGAAGCGTCGCCGTCCCCCGTGATCCAGCCGAAGCCGCTGTCGAGTCTGACTTCGCCGCCGAGCTCCCGACCGCCCAGTCATCAGCAACGAGCCTCACCGGCACCAATGACGGCGGCGAGTCTCGCGGCCCAGGAGCGCCCGACGCCGACGAGCAGCGCCTCGCCCCTCAGTCTACCCCTGACGGCCTCgaatgcggcggcggcggcggcggcggcggcggcggcggcgacgacctGCAGCACGTCGACGAGCATCGGCCAGATAGCCCTCTCGCACCAGATGCCGCCGCTCTGCTCGATCAGCTCGTCCCTCGCGTCCTCGATTATCACCAACACCGATCCCCCGCCGCTCCACGAGCCCAATACCCTGGAGATGCTGCAGAAGCGGGCGCAGGAGGTGCTGGACAACGCGAGCCAGGGCCTCCTCGCGAATAACTTGGCGGACGAGCTCGCCTTCCGCGGCGGCAAGGGCTCGCGTCTCTCGCCCTATGACTCCAAGTCCGGCGGCGCTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTACTGCGGCAAGGTCTTCGGCAGCGACTCCGCCCTGCAGATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGCAGCCGATTCACCACGAAAGGGAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAATTTCCACATGTTAAGATGAACCCGAATCCCGTCCCGGAGCACCTCGACAAGTACCACCCGCCCCTCCTGCAGCAGATCGCCTCCGGTCAGAGAGCGATGCcgtcaccgccgccaccgcccaCGCATCATCCCTCGTTtcatccggcggcggcgcacggATTCTTACCACCTCAGCCGCCCTTGCCCCTTAGCCTGGCCTTGCCCGGTATGCCGCCCCTCTACAGGTCCCCGCTCGTCAACCACCGGGACGACCAGGATCTCCCGGAGAACCTCACCAAGCCCGTTAACACCACCACCGCCCCCACCACCGCGACGTCGCCCCATTCCCCAGCCGCTCTCTCCAACTCTCGTCATTCCTTTCACGACAATCACCACCAGCAACAACACCAGCCACAACACCACCAACAACAAGCCTCGTCGACGCCGCTCCCAAAGCACCAACAACAGCACCCGCTCGACGCGCGGGAGGAGCTGAAGCTGGAGGAGCGATCGCCGCTCGAGGAACAGTACCAGcagcgagcggccagcgaggaGACGAGCGAGAGGATCACCCCGAAGAGAGAGCCGGAAGAGGTGGACGAGgccgccgaggaggagagcgaggacttTGAGGACTCGACGAGGAGGTACCTGCTGAGCTCGCCCCAGTCCTCGGTGAATCCGTCCTCGCACCCGCAGACCTACGAGGACTGCAGTATGGAGAGCAAGATGAGCGGGCGGCCCGAggccgacggcgacggcgacggcgacggcgacggcgacggcgacatGGAGGTCGACGAGGAGATGGAGGAGCAGCCGGAGAACCTGTCGGGACGGGGTGGCGCGATTAATCGGCTGGGCCAGCAGATGGCGGCTTATCCCGGCGCATCGCCCGCGAGTAGTAGCGCGAGCAGCGGTAGCCTTCAGACTTCCTTCCAAGGTATCCTGTTCCCAGGTCCACCGGCCCACCATCAGATCCCGCATCACCCGGCGACGAGCGCCGTCGCGACCCCGgccctcgccgccggcgaaATGATCGACCCCGCCAAAGACCCGGCCATCTACTCGAGCCTACTACCGAGGCCCGGCAGCAACGACAACTCCTGGGAGAGTCTCATCGAGATCACCAAGACCTCCGAGACCTCCAAGCTCCAGCAGCTCGTCGACAACATCGAGCACAAGCTCACCGATCCGAACCAGTGCGTCATCTGCCACCGGGTCCTCTCCTGCAAGAGCGCCCTGCAGATGCACTATCGCACCCACACCGGCGAGCGGCCCTTCAAGTGCAAGATCTGCGGCCGAGCCTTCACCACCAAGGGCAACCTCAAGACCCACATGGGCGTCCACCGGACCAAGCCGCCGCTCAGGGTCCTCCACCAGTGTCCCGTTTGCCACAAGAAGTTCACCAACGCCCTCGTCCTCCAGCAGCACATACGCCTCCACACCGGCGAACCCACGGACATCAGTCCCGAGCAGATCCAAGCCGCCGAGTACAACGAGTTCCCGCCCGGTTACCCCCATCATCCTCTCGCCTCTTTCCTCCCCCAGGGCTTCCCGCCGATCCACCCTGCGGGCGCCGCTTTCCCCCTCGGCTTCCCGCCCGCGCGTCCCACCCTCGAGCGCCACCTCGAGAACGACATCGACATCAAGGAGGAGCCGCTCCAGCGGCAACACTCgaaccaccagcagcagcagcagcagcagcagcagcgtcaGAGGTTCTCGGAGGAGCCGAGCGAAGACCCCGAGGACcaagaggacgaggaggaggaccgtcgcgaggacgacgagaggtgcgaggcgacgcgacggaTCGCCGAGGCCGAGGACGAGCAggatcgagagagcgaggagaacgACCACAAGGACATCTCCCTGCCGAGCTTCTCGACGTCCCTCGCCGCCCTCGAGAACCAAGTGCGCACCATCACGACGACGGCGGCCTCGGTCGCCGCCGCCAGGTCGCCCTCCTTTCACCGCTACAACGGCAGCGAGAAGAGCAACAGTCCGCCGAGCGTCGGCGCCCCCTTGGACCTGACGCCCAGGGCATCGTCGACCCCGGCCTCAGTGGCATCGGTACCGacgcccccgccgccgccgcagccgcaacCCGCCACGCACCACCCGCACCCTTTCGGCATGTTCGCAGGCCTCTTGCAGGCGGTTTCCTCGTCGCCGTCCACCAGCAGCCTGGCCTCTCCGAGCATAAACAGTGTCAGCTCGATTAACGCGGTGAACGCACcaggagccgccgccgccgccgccgccgccgccgctgctggaCCATTGGCTTCGTTAACGACGTCCGCGGTGCTGGCCGCCACGTCGACCTACAACCCGCTCGGCCTGGCAGTCGGTGGGCCAGCAGTACGCGGCAACACAACGTGTAATATCTGCTACAAGACATTCGCGTGCAACTCCGCGCTGGAGATTCATTACCGAAGTCACACGAAGGAGAGGCCCTTCAAGTGCACCATATGCGATCGAGGCTTTTCCACCAAGAAGGACGAAAGCGGGCTGCAAGTGTGCACCTGTGCGGACGAGCAGCCCTTCTTGTCCGCGCGGGGTTTGTCCTCCCCCCTGAAAGCCGATTCCCAATACAATCACTCGGCGCCGATGGCCAAGTCCATCGCCGGCGACCACGAGAAGCGAAAGCGCAGGAGGCGACGGCCTGAGGATCGGAAGAGCCGGGGGCGGACAGGAACTggagggggccgggggctTGCGTCTATCTATCCTACAGTCCACCTGCCCCCGCTGATGTCAACCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGCAACATGAAGCAACACATGCTGACCCACAAAATTCGCGACATGCCGTGTCACCTGTTCAGTGATTCCAAGCAACAGTCCCAGGACCACGAGACCTCGAGGAGCCCGATGTGCGCGGACGACTCGAGTctaccgccgccgcctccaccgccacctccgccgccgccgatgccGCCGAGCTCGATGGACCAGCCGGTCAAGAGATCTCCGCCGGAGAGCGAGCTCCCAGCGCCAAAGAGGCCAGCCAGCGTGCCGAGCAAACACTTGTGCCAGATTTGCAATAAGAAtttctcctcgtcctcggcgcTGCAGATCCATATGAGAACGCACACGGGCGACAAACCATTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGTAATCTTAAGGTGCACATGGGCACTCACATGTGGACCAACGGAGCCTCGCGACGAGGTCGCCGAATGTCGCTGGATCTGCCGCCCCTGCCCATCACACCCAAGGACTCGGAGTTCCTTCAGCGGCGACCGGATCTCTTCTATCCGTATCTACCCGCGCCCTTCCTTAATGGTGTTCAGCAGAAGCTGAACGAGATCTCGGTGATACAAAGTAACAACGGACTTCCAGCCCACTCGGTGGGAGCGGCCAAGTACGCCGGTCTCTTCGGCTCGGTgtacggcggtggcggcggcggcggaagtTTCCCCCTGGACAAGCAGCCGATGGCGCCGACGAGCAACGGACCGCTGGTGGACGGGAAGTCGGCGATCCCAGCCGGCTCGATGCTCTTCCAGACGCCGTCGCCGACCCACTCTCCCGGCGCTCCCTCTTCGAACAGCTCGAATCAGAACTCGGCGAGCGTGCCCGGCTGGAGCGGTGACGCTCTGCAGCACCACTTCGAGAGGGAGGCTCCCACCAGGTCGGAGAACAACTCGTCGCCACCTGCCGCTCGACTGGCACCGCCGCCCGCGCCCCGGGGAGAAGGTCTCGCCGCGTGA
Protein Sequence: MQLMRWSITRRLESRGIKQRQENCQAPRIPCRRISGEENEYTSEGEESGVGGGGGVVVGGGGGGGVVSGEEAVDLTAARSHQGDEDEKEQEDALEEDEEEGVDEQDEQDEDEEGSRKQIRHRQDAENNNNFVESGTASGIFAPAGTSHVTLEALQNTKVAVAQFAATALADGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQVGGQQSGAGGEASDRKEASPSPVIQPKPLSSLTSPPSSRPPSHQQRASPAPMTAASLAAQERPTPTSSASPLSLPLTASNAAAAAAAAAAAATTCSTSTSIGQIALSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSGGARGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRAMPSPPPPPTHHPSFHPAAAHGFLPPQPPLPLSLALPGMPPLYRSPLVNHRDDQDLPENLTKPVNTTTAPTTATSPHSPAALSNSRHSFHDNHHQQQHQPQHHQQQASSTPLPKHQQQHPLDAREELKLEERSPLEEQYQQRAASEETSERITPKREPEEVDEAAEEESEDFEDSTRRYLLSSPQSSVNPSSHPQTYEDCSMESKMSGRPEADGDGDGDGDGDGDMEVDEEMEEQPENLSGRGGAINRLGQQMAAYPGASPASSSASSGSLQTSFQGILFPGPPAHHQIPHHPATSAVATPALAAGEMIDPAKDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRTKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDISPEQIQAAEYNEFPPGYPHHPLASFLPQGFPPIHPAGAAFPLGFPPARPTLERHLENDIDIKEEPLQRQHSNHQQQQQQQQQRQRFSEEPSEDPEDQEDEEEDRREDDERCEATRRIAEAEDEQDRESEENDHKDISLPSFSTSLAALENQVRTITTTAASVAAARSPSFHRYNGSEKSNSPPSVGAPLDLTPRASSTPASVASVPTPPPPPQPQPATHHPHPFGMFAGLLQAVSSSPSTSSLASPSINSVSSINAVNAPGAAAAAAAAAAAGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKKDESGLQVCTCADEQPFLSARGLSSPLKADSQYNHSAPMAKSIAGDHEKRKRRRRRPEDRKSRGRTGTGGGRGLASIYPTVHLPPLMSTALGLLPSDHVFLGNMKQHMLTHKIRDMPCHLFSDSKQQSQDHETSRSPMCADDSSLPPPPPPPPPPPPMPPSSMDQPVKRSPPESELPAPKRPASVPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPAHSVGAAKYAGLFGSVYGGGGGGGSFPLDKQPMAPTSNGPLVDGKSAIPAGSMLFQTPSPTHSPGAPSSNSSNQNSASVPGWSGDALQHHFEREAPTRSENNSSPPAARLAPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633825;
90% Identity: iTF_00633825;
80% Identity: -