Basic Information

Insect: Crossocerus cetratus
Gene Symbol: RREB1
Assembly: GCA_963675795.1
Location: OY776664.1:8035297-8040402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0052 0.46 11.2 0.2 1 23 43 65 43 65 0.96

2 16 0.00027 0.024 15.2 0.4 1 23 79 101 79 101 0.97

3 16 1.9e-07 1.7e-05 25.1 1.3 1 23 107 130 107 130 0.98

4 16 0.006 0.53 11.0 0.0 1 23 221 245 221 245 0.96

5 16 0.27 24 5.8 2.1 2 23 251 273 251 273 0.94

6 16 6.8 6e+02 1.4 0.4 1 19 329 347 329 348 0.87

7 16 0.27 24 5.8 0.0 1 23 461 483 461 483 0.96

8 16 2.3e-05 0.0021 18.5 0.3 1 23 492 514 492 514 0.98

9 16 0.001 0.09 13.4 2.8 1 23 520 543 520 543 0.97

10 16 0.00038 0.033 14.7 3.0 1 23 850 873 850 873 0.97

11 16 0.00012 0.011 16.3 0.2 3 23 1115 1135 1113 1135 0.97

12 16 0.48 43 5.0 6.0 1 23 1141 1164 1141 1164 0.97

13 16 0.0034 0.3 11.7 2.2 1 23 1201 1225 1201 1225 0.97

14 16 3.3 2.9e+02 2.3 2.6 1 23 1302 1325 1302 1325 0.90

15 16 0.0092 0.81 10.4 0.4 2 23 1375 1396 1374 1396 0.94

16 16 1.1 96 3.9 8.2 1 23 1402 1424 1402 1424 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0052	0.46	11.2	0.2	1	23	43	65	43	65	0.96
2	16	0.00027	0.024	15.2	0.4	1	23	79	101	79	101	0.97
3	16	1.9e-07	1.7e-05	25.1	1.3	1	23	107	130	107	130	0.98
4	16	0.006	0.53	11.0	0.0	1	23	221	245	221	245	0.96
5	16	0.27	24	5.8	2.1	2	23	251	273	251	273	0.94
6	16	6.8	6e+02	1.4	0.4	1	19	329	347	329	348	0.87
7	16	0.27	24	5.8	0.0	1	23	461	483	461	483	0.96
8	16	2.3e-05	0.0021	18.5	0.3	1	23	492	514	492	514	0.98
9	16	0.001	0.09	13.4	2.8	1	23	520	543	520	543	0.97
10	16	0.00038	0.033	14.7	3.0	1	23	850	873	850	873	0.97
11	16	0.00012	0.011	16.3	0.2	3	23	1115	1135	1113	1135	0.97
12	16	0.48	43	5.0	6.0	1	23	1141	1164	1141	1164	0.97
13	16	0.0034	0.3	11.7	2.2	1	23	1201	1225	1201	1225	0.97
14	16	3.3	2.9e+02	2.3	2.6	1	23	1302	1325	1302	1325	0.90
15	16	0.0092	0.81	10.4	0.4	2	23	1375	1396	1374	1396	0.94
16	16	1.1	96	3.9	8.2	1	23	1402	1424	1402	1424	0.98

Sequence Information

Coding Sequence: ATGATTCACTTCCTTAAATTGTTTCTTCTCGATGTTACAGTAACGACTAAGAGCTCGGACCAAGAACAGGACACGGAGACACCTGCTGATGCTGCGTCCCCATCCAGTGTGGATTTGGAGACAGCCCACCCCTGCCCAGCGTGTCCAACGATCCTTTCAAGCTCGAGGGAGCTGACGACTCACCTCCGAGGGCACAATTCGCCCCGAAGCACCGACTGCAGCGGCGAGGAGGACTACTGTTGCGGCGTCTGCAACAAAGTGCTGAGCTCGGCGAGCTCCCTGGACAGGCACGTGctggtgcattctggcgagcgGCCGTTCAAATGCAAGTACTGCGACATGGCCTTCACGACCAACGGGAACATGAACCGGCACCTGCGCACCGCGCACCGGGCGGACTCGCCGTCGGCGCCGAGCTGCACGGACTCCGAGGGCGGGAGCAGCGACTCGGAGAAACCGGCGACGAAGCGCCGTCACTTGGAGGAGTACAACAACAACGAGGTCGCCAAGAGAACGTCGCCCGAGCTCGAGAACAAGTCGGCCAGCAAGAGGAAGTGCACCGACTTCCCCGAGGACGGACCGCGCCGGCACAAGATCCTCCTGAGTAACTCGAGGAGCGAGATGAAACCGCGCGCCGATCACGAGGGCCAGGAACGCGCTTACAACTGCCCGGTATGCGGCCGCCAGGAATTCGCCACCAGCGCCCTCCTCGAGGCCCACCTCGAGCGCGCCCACCCGGAATTCCCGGCAAAGTGCGACGCCTGCAACCTCTCCTTCAAGAACCACCGGGTCCTCAACCTCCACAGGTTCATGATCCACTACGCCGAGCAGCCGGCGGGCAGCGCCGCCAGGAGTCTTAGGAACTCGGTGGTTGGGTTCAATGATTTGACCTTTGTTGACTTCTCCTCGGACAAGTTCCCGGCCATCGCCAGGGCCGTTTGCGAACAGTCGTTGCATCGACCGGCGTCTGGGGAGGCTGCTAGGTTCCAGTGCGTCAAGTGTCTGAGGGCCTTTCCCTGTAGGTCGGCACTGGAGGGCCATGAAGTCGACTGCGGGAACTTGGGCGCGGCACACTTGGAGGACAGTCCTTCGAGGAGGGACGACTTCTTCGCGGGTCTGGACCTGCAGAATAAAGCGGCGCTTACAGAGGCTAAGGAGGGAAAGGACCTGGCGGATATACAGAGCATCATCTCCGTGACGTCCGGTCCGATTTTCCAGAATTTCCCTAGATCGGACGCGAGTACCCCTGAGAGTCAGGTGAGGTACAATCCGAATATAGGATCGTCCGGGTCTTCGGGTACCTTCTCCGCGGAGCTTCACGAGGAGGAGGCTCAGGACGCCTTCGCCGCGGAGTTTCGGAGGATGAAGCTTAAAGGCGAATTCCCCTGTCGTCTCTGCGCTGCGGTTTTCCCTAATCTCCGGGCCCTCAAGGGTCACAATCGGGCGCACATGGGAGTTGGTCCTGGAACGCCTTACCCTTGTAATATGTGTCCATACACGAGCACGGACAAGGCGACCTTAGTGAGGCACCTGCGCTCGCACAACGGCGACCGACCTTACGAGTGCTCGTTGTGCAACTACGCCTTCACGACCAAAGCGAACTGCGAGCGGCACGTGCGGAATCGGCATGGAAAGCTCACGAGGGAGGACATCAAAAGCGTCCTGATCTACCACCCGAACGAGGACTCGACCAATGACAGTCTGGAGCGGAGCTCGCCACGCGTCAAGGATGACGTTAGAAAGAGCCTCATTTATCCGAACGAGGATCAACCCCACCCGCACTATCCCGAGCGCGTAATCGAGGAGGCTAAGATCCGCGACAAACTCCCCTTCGAGGACTTCAAGTCGACCTCCCAAGACCTCAAGGACGAGGAGTCGAGGTCGTCGGAGGGCAGCGTGTCTCTAGTCAGCGAAACCAAATCCGAACCCCAAAGAATCCAAGCTAGTCCGATGAACCTGAAGAAAGCTCTCGCCTCCTCGACCCCATCGGGGGAGGAGGCTCCCCTCGACCTCTCCATGGACGTCCTCGACCTGAGCAAGAAGTCGAAGGAAAAGGAGGACGAGGGCCAATTCGAGAAGAAGGAGTTGTACAACGCGACTAGCCAATTATTACTAACAGAAGCTTTGTTGAAGGCTGGCCAGGGTGCCCAGCCAAGTTCCCTCGAAGCTCTTTACGCGAACGCTCATCTACTCTACCGGAACTTTGGCACATCCTTCGGGGGAATGGGCGCCGGCATCATCCCACCCTACCTCTTCAATCCCCACGTCTTCGGCCAGGACTTCTCCGTGAAGGAGAGGCTCCAGAAGGAGCTCATTCGAGGCCTGCAATTAACCAGCGGAGGAAACCTGATCGAACCTCCAATCGGTACCCCGAGTTTCCCGAGGGAGACCAATCCCGAGCAGAGCGAGTACGCGAAATTCCTCGCGTCGAAGATGAATAaatcgagggagaaggaggtcCCGGCTACGAACTCTGTGAAGATGGTTATCAAGAACGGAGTGTTAATGCCTAAGCAGAAGCAACGTAGGTACAGAACCGAGCGGCCGTTCACCTGCGAGCATTGCTCCGCGAGGTTTACCCTCAGGAGCAACATGGAGCGACACATCAAGCAACAGCACCCTCAACACTGGAGTCAGAGACCCAGAGGAGGTCACTCGGCCCGAGGGAGACCACCTTCGAGCCACCCGACCCTTTTGCAGAATCTGGGCCAACCCTCCCAGCTCTCCTATCAGAGTATTCTGCCCAAGGTCGAAGCTGTCCCCGAACTGCCCAAACACTCCATTTCGGATGAGGTCAAGTACGCCATTCTGGCTCAACAGTTGAAGGCGAACAAGGTCGAGGAGGACTCCGAAGAGGAATTGGTGATAGACGAGGCGGATAAGGAGGTCCAGGAGGAGCACTCGAGTCTGCTGAGAGGTCAGCTGGAGTTGGGCGAAGCCAAAGAGAGCTCTGtgaagaaggaagaagaggctgAGGTCGACGCTGAAGAGAAATTGGATGAATCGATCGACGAGGAGAACGAAGACAATTTATCCTGCAAGGACGAGTCGATTCCTGATAAAATCGAGGAGAAGTCGGAAGACGGCACGACGGACTTGGCCAGTGTCTCGGAATTACTGGACAAAGCCTCCCAGCAGTACCATCAGTTTCAACCGCAGTACTTGAGCGATGAGGAGGGATTGGTCGCCTCGACCAGCGATTGCAACAATTCCGGCAGCGACGAGAAGTCGGACTCGACGAACTCGGTCAACTCGGTCAACACTTCCAGttcgaagaagaagaggaagaagaagaagaaaaagaagaagtcGGCGTACTCGATGGCGCCGAACCGAGTCAACTGTCCTTACTGTAAGCGACCTTTCCCTTGGAGGTCGTCCTTAAACCGCCACATCCTGACTCACACGGGTCAGAAACCTTACCAGTGCGTGCACTGCTCGCTGCTCTTCACGACCAAGTCCAACTGCGACCGGCACTTGCTACGAAAGCACAAGACCAATCCCAACAAGATCCGTCGGGCGAGGACGTCCTCCTCGCCGGAGTCGAACCTCACCAGCAACAGCAACGTCTTCTCGATGAGGAACGTGCCCGAGCGTCCGTACAAGTGCAACCAGTGCCCGAGCTCGACCTTCTCCACTCTGGGCAACCTGAAGAAGCACCGCTCGACCAAGCACTCGCACAAGACGAAGAGCAGGCCGGAGAGTCCTGCGAGCGAACCCCAGCACAGTCCCGAGTGTCCCAAGCAGAACGAGCAGTCCGACTACGACAGCCAATCGAGTGTCTCCGAGAACCTCGAAGGAATCCCGGAGCCCAAGACATCCGAGCCGTCGCCGACCTTGATCGAGACGCCGAGGTCGAGGAGACCGTCGCCGAGGTCTTCTCCGGGGCCCAGTGACTTGCCCTTCAAATGCCACTTGTGCGACAGCGGATTCGCCGAGAGACAGGACTGCTTGGAGCACATCAAGCTCAACCATAAGCGCTCTTACGAGATGCTGGTGGCCAAGGGTGCCTTGGACATGGACATCGAGGGGGTCGAGGATCCACAGCCGCCGCCGGCACAGCATCCGAGCGACGGGGAAGAGAAACGCGGCCGCTTCCCGGATTACAGTAACAGAAAGGTGGTCTGTGCCTTTTGCATGCGGCGTTTCTGGTCCGCGGAGGACCTCCGGCGGCACATGCGCACCCACACGGGCGAGCGGCCGTTCTCCTGCGACATCTGCTGCCGACGATTTACCCTGAAGCACAGCATGCTCCGCCACCGGAAGAAGCACGAGTCGATAGACAGTACAATGTACGTGGGGACCAGCGGCGACGAGGAGaacgcgccgagccagccgatCACGCCTAGGAGCCAGCAGCCACCGCTCATGTCGAACGGAAGTGGCCTGATCCAGGAGAGaatctcgctgccgacggtggCGCCGGTGGCAACCGGCGACGCCGCTCCCAGTAGCCTCAGGTTCAACCCTTACGAGAAGCTCTCGAGCTTCACGGGCAAGCTGGGCGGCGTCCCGGCGAGCCACGAGGGCGACGGAGCTGACAATGACCTCATCTCGAACCTCCTCGGCATTCGCGACAAGAACTTCATCGACCGGGTGCTGCAGGCATCCGCGGACGATGCCGCCAAGCTGCTCGGCATCAAGCGGTGCCAGGAGTGA
Protein Sequence: MIHFLKLFLLDVTVTTKSSDQEQDTETPADAASPSSVDLETAHPCPACPTILSSSRELTTHLRGHNSPRSTDCSGEEDYCCGVCNKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRADSPSAPSCTDSEGGSSDSEKPATKRRHLEEYNNNEVAKRTSPELENKSASKRKCTDFPEDGPRRHKILLSNSRSEMKPRADHEGQERAYNCPVCGRQEFATSALLEAHLERAHPEFPAKCDACNLSFKNHRVLNLHRFMIHYAEQPAGSAARSLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGEAARFQCVKCLRAFPCRSALEGHEVDCGNLGAAHLEDSPSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPIFQNFPRSDASTPESQVRYNPNIGSSGSSGTFSAELHEEEAQDAFAAEFRRMKLKGEFPCRLCAAVFPNLRALKGHNRAHMGVGPGTPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDSLERSSPRVKDDVRKSLIYPNEDQPHPHYPERVIEEAKIRDKLPFEDFKSTSQDLKDEESRSSEGSVSLVSETKSEPQRIQASPMNLKKALASSTPSGEEAPLDLSMDVLDLSKKSKEKEDEGQFEKKELYNATSQLLLTEALLKAGQGAQPSSLEALYANAHLLYRNFGTSFGGMGAGIIPPYLFNPHVFGQDFSVKERLQKELIRGLQLTSGGNLIEPPIGTPSFPRETNPEQSEYAKFLASKMNKSREKEVPATNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSARGRPPSSHPTLLQNLGQPSQLSYQSILPKVEAVPELPKHSISDEVKYAILAQQLKANKVEEDSEEELVIDEADKEVQEEHSSLLRGQLELGEAKESSVKKEEEAEVDAEEKLDESIDEENEDNLSCKDESIPDKIEEKSEDGTTDLASVSELLDKASQQYHQFQPQYLSDEEGLVASTSDCNNSGSDEKSDSTNSVNSVNTSSSKKKRKKKKKKKKSAYSMAPNRVNCPYCKRPFPWRSSLNRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKTNPNKIRRARTSSSPESNLTSNSNVFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSHKTKSRPESPASEPQHSPECPKQNEQSDYDSQSSVSENLEGIPEPKTSEPSPTLIETPRSRRPSPRSSPGPSDLPFKCHLCDSGFAERQDCLEHIKLNHKRSYEMLVAKGALDMDIEGVEDPQPPPAQHPSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENAPSQPITPRSQQPPLMSNGSGLIQERISLPTVAPVATGDAAPSSLRFNPYEKLSSFTGKLGGVPASHEGDGADNDLISNLLGIRDKNFIDRVLQASADDAAKLLGIKRCQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633836;
90% Identity: -
80% Identity: -