Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776662.1:3440443-3442683[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00089 0.079 13.6 0.6 1 23 339 362 339 362 0.96

2 10 6.4e-06 0.00056 20.3 0.5 1 23 368 390 368 390 0.99

3 10 4.3e-07 3.8e-05 24.0 0.7 1 23 396 418 396 418 0.99

4 10 0.052 4.6 8.0 1.2 1 23 424 446 424 446 0.98

5 10 2.7e-06 0.00024 21.5 0.2 1 20 452 471 452 472 0.96

6 10 0.031 2.7 8.7 2.4 1 23 481 501 481 501 0.94

7 10 1.3e-06 0.00012 22.5 0.5 3 23 509 529 508 529 0.98

8 10 0.00013 0.012 16.2 1.4 1 23 535 557 535 557 0.98

9 10 0.0026 0.23 12.1 2.6 1 21 563 583 563 586 0.96

10 10 0.65 58 4.6 3.9 3 23 594 615 592 615 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00089	0.079	13.6	0.6	1	23	339	362	339	362	0.96
2	10	6.4e-06	0.00056	20.3	0.5	1	23	368	390	368	390	0.99
3	10	4.3e-07	3.8e-05	24.0	0.7	1	23	396	418	396	418	0.99
4	10	0.052	4.6	8.0	1.2	1	23	424	446	424	446	0.98
5	10	2.7e-06	0.00024	21.5	0.2	1	20	452	471	452	472	0.96
6	10	0.031	2.7	8.7	2.4	1	23	481	501	481	501	0.94
7	10	1.3e-06	0.00012	22.5	0.5	3	23	509	529	508	529	0.98
8	10	0.00013	0.012	16.2	1.4	1	23	535	557	535	557	0.98
9	10	0.0026	0.23	12.1	2.6	1	21	563	583	563	586	0.96
10	10	0.65	58	4.6	3.9	3	23	594	615	592	615	0.97

Sequence Information

Coding Sequence: ATGCTCAATATGCACGAAACCCTTCTGAATGAAGGGCCCGGAAATGAGCAGCCGCAAGAAGAGGTCCAATTGACCGAGCTCGTCCCAGTGGAACAGTCACGCATCCGGGAGACCGGCATCTTCAAAGACGCCGATGCGACCGATGCTTTGAAAGTCCTCAGGAGTTTCACTGGCGGCTGCAACGACGAGCGAGACTATGGCATTCAGACGTTTAATTTCTCCGAGAAGATCGACTGCGAGGATGACGAGGACACTAAGTGCAAGGGAGCGAGAAATCGTCGTAAGAGGATAAGTAAATGCGAGAATCGCGATGCGGAAGCCGAGACCAAAGACAGAAATAAATGTAAGTCCGACAATCCCATTTCAAAGAAACAAACGCGTTCAATCGTTAAAAAGGGTAAGATaaaaacactgaagaaaaaAAACACAAAAACCGTGAAACGGAAAAACAGTAAAgaatctaagaatgatatcgACGAGAATGCAAGTGAGAATGATTTCAGTatcgacgaggacgaggaagggATACATCTGGATTTCAGCAAAACGAAAGAACTCAAAGATGAAATTTACATTTTCCGCAACGAATCTGTAGATTCGCGCACCCTGACGGACCGCCGAAAGGACTCcaagaagaatttcgacagttCCGAGTCCAATGACGCACAATTCGACAAAGCGGAGTCGATTCACGGCGAGCGCAAAGACCCCAACGACACCAGTAACAACAAAGAGAACAAGTACCTTTCGAGCAACGAATTGGAATCAACGCACGACAGCACAAAGAAGGAGCTCAGCTTGAACATAAACGCGATCATTCAAGCCAACTACTTGTTCGAGCAAGAGAACAACAATGTTATGTCACCGAGTCAGGCCAAGGATCAAGAGAGCACCTCATCGTCGCCAACTTCGATATCCACTCTGACCGAGGGCTTCAGTTCGtcgagcggcgaggagaaCAGTTGCGCGAAGAAGAGCAACGAAGCCAGCGACCAAGAGACAAAAGAGAAGAAATACTGTTGCGTAGTCTGCGACGCCCGATTCAAGGGCAGCGGGGGACTGAGAAATCATTACAAAATCGTGCACGGTGCCGGTCCGGTCTTCAAGTGCGACGAGTGCGGCAAGGAGTTCCCTCTCAAGGAACGGCTCAAGCTCCACGTCAGGACGCACACCGGTTTCAAACCGTACAAGTGTTCCGAGTGCGACAAGACCTTCGCGAGAGGCGGCCAATTGGTGCAGCATCGGCGCACGCACAGCCAGGTAAAGCCCTACCGTTGCAATCTCTGCGCGGGCACCTTCACCTGCTCGGCGAACTTGGCCCTCCACGTGAAACGGCACAACGGCCAAAAGGACCACAAGTGCGAGATCTGCGGGCGAGCTTTCGTGCGCAGGGACGCGCTCAAGAAGCACCTCGAGTGCCTTCACCGGGACGTCAAGTCATTCCTCTGCGTGATATGCAACAAGACGTTCAAGGGCCACCTGCCGCAGCACATGCGGACGCACGCCCGGGATCGACCCCACGGATGCGCGACCTGCGGCCAGAGATTCGCCCAGAAGTCCCAGTTGACCGTTCACCAGCGGACCCACAGTGGCCAGAGGCCCTTCAGGTGTCTGGTCTGCTGGCAGGCGTTCGCCCATTCGACCGCCCTCAAGCTCCACACGAGGCGGCACACCGGCGAACGGCCGTTCAAGTGCGCCGAGTGCAACGCCGGCTTCACCCAGCTGCCCCACTGGAAGAAGCACATGAAATGCATACACGGCAGGAACGAGCCCTACGGCTGCAAAAGGTGCAAGAGCTTCTTCAGGATCAAGAACGACCTCGAGAGCCACGAGAAAACCTGCCATCCCGATGGCGAGGAGAGCAACCCCCCCGCCGGGGAGAGCAGCGCCGAGCCCTTGATCAATGAACCCGTGGAGAAAGCGTCTTCGCCGGtcaagtacagggtgatgacTGTCGAGAGGATGCGATTGCTGTTGGCAGTGTTGCTCAAGAGGATCAGCAGGCAGGAGAGGCTCGACGAGCTCGGTTTTGGGAAACGTCTCATCGACGAGGTCCTTCAGGACTCCCTGATATCCGCTGGCAAGGAGCCAGTGACCGGTGAGGGCTTGTCCGAACTCGAGGCGCTCACCAAGAATCTCGAGATCTTCCTCGAGTGGACGGTGCCCCGCGAGCACTGGGAGAACTTTCGCAAATCGAAGAAAACACCCGAGGATATCTTGGAGACCCTCACCGCCACGTAG
Protein Sequence: MLNMHETLLNEGPGNEQPQEEVQLTELVPVEQSRIRETGIFKDADATDALKVLRSFTGGCNDERDYGIQTFNFSEKIDCEDDEDTKCKGARNRRKRISKCENRDAEAETKDRNKCKSDNPISKKQTRSIVKKGKIKTLKKKNTKTVKRKNSKESKNDIDENASENDFSIDEDEEGIHLDFSKTKELKDEIYIFRNESVDSRTLTDRRKDSKKNFDSSESNDAQFDKAESIHGERKDPNDTSNNKENKYLSSNELESTHDSTKKELSLNINAIIQANYLFEQENNNVMSPSQAKDQESTSSSPTSISTLTEGFSSSSGEENSCAKKSNEASDQETKEKKYCCVVCDARFKGSGGLRNHYKIVHGAGPVFKCDECGKEFPLKERLKLHVRTHTGFKPYKCSECDKTFARGGQLVQHRRTHSQVKPYRCNLCAGTFTCSANLALHVKRHNGQKDHKCEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAECNAGFTQLPHWKKHMKCIHGRNEPYGCKRCKSFFRIKNDLESHEKTCHPDGEESNPPAGESSAEPLINEPVEKASSPVKYRVMTVERMRLLLAVLLKRISRQERLDELGFGKRLIDEVLQDSLISAGKEPVTGEGLSELEALTKNLEIFLEWTVPREHWENFRKSKKTPEDILETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633839;
90% Identity: -
80% Identity: -