Ccet004145.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crossocerus cetratus
Gene Symbol
pol
Assembly
GCA_963675795.1
Location
OY776663.1:11678139-11688503[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3.2 2.8e+02 2.4 0.1 12 22 117 127 116 127 0.88
2 13 0.013 1.2 9.9 4.8 1 23 1457 1479 1457 1479 0.97
3 13 0.056 4.9 7.9 3.9 1 23 1483 1505 1483 1505 0.96
4 13 0.00048 0.042 14.4 3.9 1 23 1510 1532 1510 1532 0.96
5 13 0.00012 0.01 16.3 2.9 1 23 1583 1605 1583 1605 0.98
6 13 0.0021 0.19 12.4 1.4 1 23 1610 1632 1610 1632 0.97
7 13 0.00038 0.033 14.7 2.4 1 23 1681 1703 1681 1703 0.98
8 13 0.0017 0.15 12.7 1.0 3 23 1713 1733 1712 1733 0.98
9 13 2.7e-06 0.00023 21.5 2.1 1 23 1743 1765 1743 1765 0.96
10 13 0.00061 0.053 14.1 1.6 1 23 1771 1793 1771 1793 0.97
11 13 0.00043 0.038 14.6 0.7 1 23 1799 1821 1799 1821 0.98
12 13 1.3e-05 0.0011 19.4 2.0 1 23 1827 1849 1827 1849 0.96
13 13 0.00023 0.02 15.4 0.3 1 22 1855 1876 1855 1876 0.96

Sequence Information

Coding Sequence
ATGACCACCCGGGCCGACAACGACGAGCCAGCGGCCGTAACGGCCGTCGAAGCTGTCAGCTCTTGCCGCCTTCCGCAGTTTTGGCACGAAAAACCGGACCTATGGTTTATGCAAGTAGAATCGGTTTTCCACGTCGCCAACATCAAGTCCGACAACTCCCGGTACCACGCAGTGGTGAGGCAACTCGATCAAGCAACGAGGCCAATCCAGGACGTAGAGGACATCCTGAGGgcaccgccagaaaaggggaagTACGACGCTCTGAAAGCCGCGATCTTAGCCCGCTTGGCCGAATCGCCCGATCGTCAGCTCCTAAAGCTTTTCACCCAGCTTGAACTCGGTGATAAAAAACCCTCGCAGTTACTGAGGCACATGCGAACGTTAGCGGCCGGTCGGGTGCCCGACAACGTCCTAAAGGTCAAATGGCTCGACCTCCTGCCTCCTAGTGCACAGAGACTGTTACGGATATTTAAGGTATCCACTCTCGAGGAAATGGCCATCGCTGCCGATGAAATCGTCGACATCTCGCCAACGGTCGCCGCGACCGCCCTCGCGACCAGGGCCCAGCATCCGCCGCACGCCGCAAGCAGATCGCGTTCGCGGGAAAGGAGCCCCGCCAGTCACCCTGGACCAGCTTATGATCGCCTGGTCGAGGAGATGGCAGCTATGCGCGTCGCGATAGCAGAAATTCAAGGGCGCCTCGCGGCCCAGTCGGCTCAACCGCCACCGCAGTGGAACAACAATCGAGGACGTCCGAGGTCGCGTAGTCGCCCTCGTCGTCCGGCATCGACGGAACGAACAGCACAAACAGGTGTCTGTTTTTACCACGAGAGGTTCGGCAATCGCGCGTGGCAATGTCAACCACCGTGTTCGCCGACGGACAGAAGACTGCACGTGTACGACCGAGAGACGCGGACCAAGTTCCTGGTCGACCCCGGTTCCGTCGTCTCACTCCTCCCGCGAAACGTCGTCCGCAAACCTCTACGCGCGCAACGTCTGACTTTGCATGCCGCGAATTCGACGGTGATCGCGACCTACGGGCAGCAGACAATAACATTGAATCTCGGCCTTCGACGCGCGTTCAAGTGGCAGTTCATTATTGCCGACGTCCAgtcggccatcctcggcgcagaCTTTTTATATCATTACGGGTTGTCAGTGGACCTCAAAGGACGACGGCTAGTCAATTCCCTGacctccctcgccgccgcgggtGACTGCCACGAACCCGCGATTCACTCCGTTTCGACGATCGGTCGACCGCCTATTCCGGAGGGCCAGTACAACGAACGCTACGCTCGCCTGCTCGCGGATTTCGCCGGGCTAGCTACGCCAACCGGGTCCACGGCTATCCTGGAAGGATCTCCAGTAGAGCACAGCATCCACACCATGGGTCCACCGAttttcgagcggccacgcaggcTCGCGGGCGAGAGACTGGCAGCCGCAAAGGAGGAATTccacacgcttctggagcgaGGCATTATTAGGCCGTCCAGCAGGCAATGGGCGAGCCCGCTGCACCTGGTGCGCAAGCCGTCCGGAGGCTGGCGAGCGACCGGCGACTATCGCCGCCTCAACGCCCGCACCGTGCCCGATCGGTATCCGCTGCCGGTCATCGAGGACCTTCTGCAGGACTGCCACGGTTGTACGATCTTCTCCACAGTCGACTTGCAGAGAGCGTATTACCAGATTCCAGTCGCACCAGCAGATATTCCCAAGACGGCCGTCACGACGCCGTTCGGCATGCTTGAATTTGTTGGCATGCCCCTCGGACTGCGGAACTCAGCGCAAACGTTTCAGCGTTTTATGGACTCGCTGCTACGCAAGCTGCCGTTTGTCCGCTGCTACCTGGACGATCTGCTGATCTTGTCGCACTCCCACGAGGAGCACCTCGAGCATCTCCGGCTCCTATTTGAGACGTTGCAGCAAGCAAGACTGACGATCAATCTCCAGAAGTCAACGTTCGGACAGGCGCAGGTATCGCATCTTGGTTACCTGGTTTCCAAAGACGGGTACCAGCCACCAGCGCGCAAAATCGAGGccatcAGTTTTTGCTCCAAATTCGACGCCCGCTTCGAGAGCATCAAGGGCGACGACAACGACGTTGCCGACGCGCTGTCGCGCACCTGCACGGTGTCAATGCCGACAGTGCTTGACACACGGACGATCTACGCGGCACAGCTCGCGGACCAGGAGCTGCCGCATCTTTTGGAGCAGCCAACCCTGAAACTTCGACGGCTCGACATCGAGGACTGCGAGATGTACTGTGACATCTCGACAGGTGTCATCCGTCCGTACATCCCGGCGACCTTACGACGAAGTGCCTTCAACGTGGTCCACGGATCGGCTCATCCCAGTGGCAGGGCAACTGCCCGCCTCCTGGCGCAGAAGTTCTTCTGGCCTGGCCTGAAGAAGGACGCGGCCCgatgggcgagggagtgcgagcCGTGCCAGCACGCCAAAGTGCATCAGCACAATCGCGCGGCACTGGACAGGTTCGACGAGCCTGACGATCGTTTTAACCACGTGCACATCGATCTCATTAAGCTTACGCCGGTGAAGGGATTCGTGTACTGTCTCACTGCTGTTGACAGATTTTCCAGATGGCCCATAGCAGTCCCTCTGCAGAATATCCAGGCGGAGACAGTAGCCAAGGCATTCTGGTCGCATTGGATCAGTCAATTCGGCTCTCCACTCACCATTACGTCCGACCAAGGCACGCAGTTCGAATCGGCGCTCTTCACCGCCTTGGCTCACCTGGTTGGAGCCAAGCGCATTCGAACTGTTCCATACCACCCTCAATCCAACGGGCTGGTGGAGAGGATGCACCGCACGCTGAAGGCAGCCCTCATGTGCCAGCCGCAGACTCCTTGGCCAGATCTACTGCCCTCGGTCCTACTCGGACTGAGAAATACGTTCAAGGAGGACCTCAAGGCTTCACCGGCAGAGATGCTGTTCGGCACGACACTCCGCATCCCGGGCGAGTTCTTCGTCAAGGACAGCGCGCCCGCTGACCCGCAAAGTTTTGTCGGCGGACTACGCAATCTGTTTCAGGCAGTCAGACCGGTGCCAGCGTCCAGGCATTCGCAGCATCAGCCTTTCGTGTTCAAGGACTTGAACACATGCACACACGTCTTCAGGAAGGTTGACACGATCAGAAAACAGCTGGACCAGCCTTATACTGGCCCGCACGAGGTCGTCAAGAGACTGTCTGACAGATCGTTCGTTATCCGCATTAAAGGGCAAGAACGAACGATCTCGACCGACTCGCTAAAGCCGGCATACTTGGAGCAGGCAGACTTAAGCACGCCGCCGGCGCGTAACACGCCTGCGCCAGACGAGCCGCAGCCAGGACCGTCCGTACCACCTCCCGCACCTACGCAGCTGAGGGCGCAGACGCCAGCATGGCACCCGCCAACACCCGGCCCCACTCGGCTAGGTATAAGTCTACTCGCACCTGGAGGCACAATGACCGAGGAGTACTTTGAATTGCCACTGAACATGGACAGAGTTTGCAGAATCTGTCTGACAGAGGCTACCAATTTATCGCCTATCTTTTGTGTCGACCAAGAAGTGTCCGATTATTCAGGCTTACCGCAAAAGATCAGAGTCTGCGGGGCCATCGAGATCCACGAGCAGGATGGGCTACCTTCGCTCATTTGTGACGTTTGTCTATATAAAGCGACGGTAGCTCACGAGTTCCGGCAGCAGTGCCAGCTATCGGACACTAAGTTAAGAATGTACTATAACAAAGCTGCGAGGAACTCGATCATGGAGTGCAGTACACAGACAGATATAGAGAGCTCTTTATTGTCGAAGGAACCAGTGGAGCCAGAGGAGCATTACTTTGTGAAAGGAGAACTCCAAGTGGCGACTAACAGTGCACCAGAGTATACTCAAGTGGACGTTCGAGTTGAAAGTGAGACATATGTCAGGGAAGAACCGAGCTTGACTGCCGAGCAGATAGTTATGGAGGATGGCAAACTGTACATGTGCTCCATTGGTTTTGACGGTGAGAAAGAGATGGCAAAAGAAGACTGCGTGGAAGAGTCTGCTCCGGTCGCGGAAGAATCTATCGTCGACCCAGCCAGTGTAGATATAGAGGAGCACATGGAGATAGAGGATAAAGCAGACATCGAAGAGAGTATACAGAAATACGCGGAGGAACAATGCGCCGATCATCAGGAAGAATACCTCACTGAAAGCATTGTCACCGAAGAGCTGGTAGAGGAGGAAGTAGTGCCACAAAAACGAACATCGTCGAGAAAGGCGAAATTACTGCCTAATAAAACTTACAGCGAAGAGGAAATGGACGAGAGTTACTACGGCGAGAGAATCAATAATCAAGAATCTGAGGAATCGAAATTCCAGTGCAAAGTCTGCTCGAAACACTGTGCCACCCTCAAAGGCCTGAAAAAGCATTCTCTCGTGCATGAGAAGAAGCACAAATGCAACGTTTGCTTGAAGATGTTTTACAAGCAAGAGAACCTAGAGTTTCACAAGAAGATACATTCGTTCAAGCCGCACGCATGCCAATTATGTCACACATCTTTCTCAAAACCGCAGAGTCTCGTGCGCCACTTAAAATCCCATACCGAGAAAGTGAACGATATGATCAAACAAATCAACACCGACGATCCAAAAGATGACGAGCCGAAAAAGGAAATGAAATTGGAGGACGACACCGACGACGACACCGGCACCAGCAACGAAGTCGACGATTTTGAAAATGCACCTGAATTGTACAAATGCGAAGTTTGTAATAAGTACTGTTCATCGTTAAAGAATTTAAAGAGACACGCTTTGGTACACGGCGACAAGAAGTATTCATGCACGGTATGTAAAAAGTGGTTCTTCCGACCGGACACATTGAAGAAGCACGCTGAAAAGCACGGACATGGTTTACTTGACAATCTGGTCGATGACAACAATTTGTACGACTCGGACGACGATGCGTTGCCAAATCCGACGGCCTCACTACCACCGGAACCCGAATCCGCTAAGAAGGACGAGAGCGACGAGGACGCAACGGGAGAATACAAATGCCAGCACTGTGACAAAGTAATGGCAACGAAGAAAGGACTCCGACGACACGTTACCATGCACAAGCCAAAGAAAGCAGAGCCAGTGGCTTGCGAAATTTGCCGGAAAGTTTGTGCTAGTCAGGCGCGGCTCCTTCTTCACCAACGAACCCACAAACCCAAGGAGAAAGTTCCACGGGAGTACCTATGCCACATCTGCAGTAAAGTTTACCCGAGCAATTCTTCTCTAACATATCACATGCGAACTCACACAGGCGTGAAACCACACGTCTGCAAGACATGTAACAGCGGCTTCACGACGACCACCAGCCTTGCTAATCATATCCGCATTCATACGGGTGATAAGCCTTTTGTCTGCCACGTCTGCAGCGCAGCGTTCGCAGTGAGTTCGGCGTTCAGACGGCACCTAACGCGTCACACCGGTGAGGCCAACTATCTTTGCAAGACCTGCGGCAAGGCTTTCAAAAGACTCAGCACCCTCAAGGAGCACACCTACACACACTCCGGCGAGAAGCCCTATGTCTGCAAAACGTGCGGAGCCGCCTACAGTCACAGCGGCAGTTTGTTCGCCCATCAGAAACGCTGTCGCGCTCAATACGGTGAGATGGTTGTGGAGGACCATACGGTAACGCATATTCACGTAACGAACGTGCAATCTGCCGTGCGGTCGCTTGCTGTGATAACGCCCATGTTCTAA
Protein Sequence
MTTRADNDEPAAVTAVEAVSSCRLPQFWHEKPDLWFMQVESVFHVANIKSDNSRYHAVVRQLDQATRPIQDVEDILRAPPEKGKYDALKAAILARLAESPDRQLLKLFTQLELGDKKPSQLLRHMRTLAAGRVPDNVLKVKWLDLLPPSAQRLLRIFKVSTLEEMAIAADEIVDISPTVAATALATRAQHPPHAASRSRSRERSPASHPGPAYDRLVEEMAAMRVAIAEIQGRLAAQSAQPPPQWNNNRGRPRSRSRPRRPASTERTAQTGVCFYHERFGNRAWQCQPPCSPTDRRLHVYDRETRTKFLVDPGSVVSLLPRNVVRKPLRAQRLTLHAANSTVIATYGQQTITLNLGLRRAFKWQFIIADVQSAILGADFLYHYGLSVDLKGRRLVNSLTSLAAAGDCHEPAIHSVSTIGRPPIPEGQYNERYARLLADFAGLATPTGSTAILEGSPVEHSIHTMGPPIFERPRRLAGERLAAAKEEFHTLLERGIIRPSSRQWASPLHLVRKPSGGWRATGDYRRLNARTVPDRYPLPVIEDLLQDCHGCTIFSTVDLQRAYYQIPVAPADIPKTAVTTPFGMLEFVGMPLGLRNSAQTFQRFMDSLLRKLPFVRCYLDDLLILSHSHEEHLEHLRLLFETLQQARLTINLQKSTFGQAQVSHLGYLVSKDGYQPPARKIEAISFCSKFDARFESIKGDDNDVADALSRTCTVSMPTVLDTRTIYAAQLADQELPHLLEQPTLKLRRLDIEDCEMYCDISTGVIRPYIPATLRRSAFNVVHGSAHPSGRATARLLAQKFFWPGLKKDAARWARECEPCQHAKVHQHNRAALDRFDEPDDRFNHVHIDLIKLTPVKGFVYCLTAVDRFSRWPIAVPLQNIQAETVAKAFWSHWISQFGSPLTITSDQGTQFESALFTALAHLVGAKRIRTVPYHPQSNGLVERMHRTLKAALMCQPQTPWPDLLPSVLLGLRNTFKEDLKASPAEMLFGTTLRIPGEFFVKDSAPADPQSFVGGLRNLFQAVRPVPASRHSQHQPFVFKDLNTCTHVFRKVDTIRKQLDQPYTGPHEVVKRLSDRSFVIRIKGQERTISTDSLKPAYLEQADLSTPPARNTPAPDEPQPGPSVPPPAPTQLRAQTPAWHPPTPGPTRLGISLLAPGGTMTEEYFELPLNMDRVCRICLTEATNLSPIFCVDQEVSDYSGLPQKIRVCGAIEIHEQDGLPSLICDVCLYKATVAHEFRQQCQLSDTKLRMYYNKAARNSIMECSTQTDIESSLLSKEPVEPEEHYFVKGELQVATNSAPEYTQVDVRVESETYVREEPSLTAEQIVMEDGKLYMCSIGFDGEKEMAKEDCVEESAPVAEESIVDPASVDIEEHMEIEDKADIEESIQKYAEEQCADHQEEYLTESIVTEELVEEEVVPQKRTSSRKAKLLPNKTYSEEEMDESYYGERINNQESEESKFQCKVCSKHCATLKGLKKHSLVHEKKHKCNVCLKMFYKQENLEFHKKIHSFKPHACQLCHTSFSKPQSLVRHLKSHTEKVNDMIKQINTDDPKDDEPKKEMKLEDDTDDDTGTSNEVDDFENAPELYKCEVCNKYCSSLKNLKRHALVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVDDNNLYDSDDDALPNPTASLPPEPESAKKDESDEDATGEYKCQHCDKVMATKKGLRRHVTMHKPKKAEPVACEICRKVCASQARLLLHQRTHKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKTCNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYGEMVVEDHTVTHIHVTNVQSAVRSLAVITPMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-