Basic Information

Gene Symbol
ZFX_1
Assembly
GCA_963675795.1
Location
OY776665.1:130042-134706[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.3 1.2e+02 3.6 0.1 3 23 13 33 12 33 0.94
2 14 0.0014 0.13 12.9 2.6 2 23 1113 1135 1112 1135 0.97
3 14 0.011 0.94 10.2 0.1 2 23 1148 1169 1148 1169 0.98
4 14 1.6e-05 0.0014 19.1 3.1 2 23 1172 1193 1171 1193 0.97
5 14 0.013 1.2 9.9 0.3 1 23 1199 1221 1199 1221 0.95
6 14 2.6e-05 0.0023 18.4 4.5 2 23 1228 1249 1227 1250 0.95
7 14 0.12 10 6.9 3.7 5 23 1263 1281 1262 1281 0.97
8 14 2.3e-05 0.0021 18.5 1.5 3 23 1288 1309 1287 1309 0.97
9 14 0.011 0.94 10.2 0.3 2 23 1325 1345 1324 1345 0.97
10 14 7.1e-05 0.0062 17.0 0.7 1 20 1351 1370 1351 1373 0.92
11 14 8.8e-05 0.0078 16.7 2.7 1 23 1381 1403 1381 1403 0.99
12 14 0.0025 0.22 12.2 3.2 1 23 1409 1431 1409 1431 0.97
13 14 4.5e-06 0.00039 20.8 3.9 1 23 1437 1459 1437 1459 0.99
14 14 0.0015 0.14 12.8 6.3 1 23 1465 1487 1465 1488 0.96

Sequence Information

Coding Sequence
ATGGAGGGTACCAATATTGATGAGGCTGCAGTGGCTTGTCCAGTTTGCACGTTATACCTCAGAGAAGGTATCAGCCTACAGAGACACTTGGATACTCATCCAAAAGAACAGGTGATAGAGGCTCTGATAAAGGCAAGTGCAGGTGCTGGTGCAGGTGCAAGTGCAAGTGCAAGTGCTAGTACTGCCCAGGGTCAGCAAACTCAAACTCAAACTCAAACTCCACTTTCCCCAGTTTCATTGATCTCCACCACCTCTGTACAACAGCCTTCTCACAATACTTCCCATCTTGCGCATAACTCCCAAGTCTCTCCTCAATCTCCATATCCCATAGGGCCAGTCTTTGAGTGCCCGCCAATTGGAACAGTAATGCCTCCCCAATTTGCCTCGTTTAGTTACCAACAATTTGTAAATAATGGCACTGTCATGATACCACAATATGCCATGGCACCGCAGGCAAACCAAATGATGCAGATGCTCTATAATCCTTATAGTATATATCAACAGCAGCAGATCCCAACAGTGCAAATGCTATCGCCTGTTAATACGCTACCTAATACAAATAGGCTCAGAACAGTCCCAACTCTGGCCAATGATACTACCCCTAGGCCTAGCATAACAATACCGGTCAATAATAATGAGCCAAAAGAGATATTGCCTGAAATTTTGTCCGAGGTAGAACCAGAACCAGAACAAGAACCCAACCAACAGCCGGATACCCACACAGGACCTGAGTCAGAGAGAATGGTAACAGAGCTAGATGCCGTCAGAATTCCTCCATCACTAAATCATAGTGACATAATCCAACAAGACCATAATGGACTTGGTACCCAAGGAGTACGCCGGGATCACCACCAATCTCCTCCAATTCCACCATCAATACCAATCACTTGCAATATTAGCAATATTAGCAATATTATCGAGAACGACGAtgccgacggcggcgacgaggaggatgaggacgacgacgatgagGACGACgttgacgacgacgacgacgacgaagaTGACGATGATAAAGCTGAGACAGTACTGCCCAATATTCATAATGCGCAACCAACAAATCCATCAATTCAACTTCCAAGTTCAATATGTAATATCTCGTGTCGCGACGTATCTACCgtacagcagcagcagcaagatCTGCAAGAGGAGTACATACACACAACATATAAAGAGTGCGTCGGGGAGAATGTATCAAATGAAATAACTTTGACTGTGTCCGAAGATAAGGCAAAGGAATGCAGAAGGATCAATGATAGATTGACGTACAATAAAGATGTACAAATGGCAGACAGTATTATTTCTCCCAAGAGACAATCGCCGAGTGCACTGTCCAAGGAATCTTGTCAACCGGTAGAAGTTGAGCAATTGGAGCACTTGTTGATCACAattatggagagggaacttggCAGTACAACAGAGGAAGAAGCAGGAAAGGAGGAacgaggggaaaaaaggaatgAAGGGACAAGGCAAAAGGCATTAAAAGATGAAGCAGATGCCGTTGTTAAAGAGGGTATGTGTCTAGAGGATGGAGGAGGTAATAATGAAATTGCTCGGGAGACTATCAGTCCGGATGTAAAGTTACCACTAAATACAGCAATGCGACTGACTGTGAATGACCTGGATAAGAATTATTATTCTACCTACAGATACAAGCATAGTTTATCTGCCCCAAGCTCTCCTATCTCTCCCAAGAAAGCCTATCATTCCTATTCCACCCATTCCGAGTTTGGATCTGCGGAGAATTTGAATATATACCCCGTTGGATTTGACGCGAGTGTATTGCAAGATGAAgatgaggaggacgaggacgaggacgaggacgaggaggaggaggaggaggaggaggaggaagatgaAGATGCAGATGAGGAGATTGATGAGGAAAATGATTCGGAAGCTAATGAGAACGACGAGGAGAAGGAAAGGCTGGATCTGGAGGAGAATTTGGACGAAGCTGACATGGAAATCGAAGAGATTCCTAGTCCACATACCCCAGCAGCAAAGTCTGGGGAGAGTTGCGATTATGTTAGATCGCATACGCCGCTCTCCACGAGTAGCGGAATATCTGTCCTCAGAGTTAGAAAGGATCTGAGTAAGTCATGTTCACCAATGTCAGTGCATTCTTTTCCTCATATGGAAACCACTGGTACAAATCAAGAGGAATCGAGCAATAACCCTGATAAACTTGGGACATGCTTTAAAACTCCAATCAATTGTTTGCAACTTAATGAAGAAGCTAATAATTTATGTCAAGAGGTGTCCCTTGTCGAGGAAGAAGTGGACAACAAGTCGGTGTCGCAGCATATCAACAGTACATACCACCAACCCATCATTACAGATAATCTCAACAGCTTTCCTACCGTCAGTTCCGTGCAACAGGAGGTCGCGTTGTCGCACGATTCTTACTCGGCGATGGCTAGTAACAAGGCCCAAAATTCAATGAGCCTCCCCGACTCGTTTGAAGCTGCCATCGCCATCGAGACCACCGAGAGCAAATCCTATCACTATTCCAAGCCTATTGTACAGAAACAGTCATTGGAGCTTCTCAATTTGAATGAGGATGCCCACGCCGGGCCGATGAATGTTTTTGAGTTTGATGGCTTGCAAATTTTAGTTCCCAGTACATACATTAATGAGTCCTCGCAGAAGGCAGTAAGTGCTACTAGCCAACAATCGATGGCGAGTAGCGAAGGGGCTGTGGGTATCGACGAAGAAGTGAAAAGCATTAACATGAGAGCCGATGAGACAATGCCACCAAGAGGAGAGCTGTCCGAGCAGGAGAGCAACGGCTACACCGAACAATCCGCCTGGCAGCTATACATGGGCCAAGAGTCGTCGCGTATGTCGACATCGTACGATTTAATGGCACGGGAAAGTTGGGAAGAATCGGAAGGATCGGACAATGAGATCGGCGGGCCATTACTGGATAGCCGCTCGCTGGCAACACATTTCACATCGAGCTTATTCCTTGACCGCGACAGGAAGAGCCCGACCAAGAGAACGTTCAAGTGTTATCACTGCTCGGAAGTGTTTGACTGTCCGAAGGAACGGCGGGTGCATAGCACTACTGTCCATAAAGAGGCAGGACCTAGCAGTAGCGGTCGACAGAGTAATCAAGGGGATCAAGTAGAAGTAAAGGATATCAAGTTACTCGATGGACGTGTCAACATTTTCGAGGATATATTTGTCCCGGGGTTACATGTCCAGCAGATTTATCATCACCAGCAGCCTCTATTGCACCAACTCCAACCGGCCCAAACGCCCGAGCTGAACAAGCTGGATTCGGAGGGTAAAGCCGACAGTGCGGTTGTGCAGTTGAGCGTCGAAGTGACTTGTACGATATGCAGTCAGCGCTTCAGCAGTGACAAATCACTGCAATTGCATCATAGAAGAGTTCACGTAGCGGAAGCATCCAAACGGATTCGAGAGAGCGCCAAGTGTCAGATTTGCAACGAAGAGTTCCCTTCCGTCTTATTGTTTAACGCACACCTCAAGGTTCATCCGTTGGAGTGCAGTCAATGTGGCAAGTACTTTTACAGGAAGCAAAACTTCAAGCTCCACATGAAGCGGCATCTCGGCATCAAACCATTTCCATGCACGGTTTGCGATAAAGCCTTCTTAACCAAGCAGAAATTGGACGAACACACTAACGGGCACACCGGCAATGCGCCAGTCAAGTGTAATCTCTGCAACGAGACCTTTCGCCGATATTCCAATTTGACCCAACACAAGAATAGGCATCATCTTAACATTAAGAAGAAACTCAAGGATTACATATGCCACTGTGGCGAAGTCTTTCACACCAAGAAAAAATTAGCCTGGCATAAAGAGACACACGACGAAAAGCCAAAGGCTTGCACCTACTGTAACGAGAGATTCATTCATATGGCCAGCTTGACCCGGCACATGCGCCGCGCACACAATAGAAGATTTGTTCCTGATGCGCACAGGGAGAGCGAAAACGTCGAATGTCCCATCTGTAAATGTATTTATCTTCGCTCCTCTCTGGCAGTGCATATGCGTGTTCATAATGGCGAAAGGCCCTACGAATGCCAAGTTTGCTCAAAAGCATTCAGTACTAAGTGGAATTTACAGTTGCACAAGTGGACACACGCCGCTCGCAGTACTAAACCATTTAAATGTAATCAGTGTAGCGCTGCATTTTACAGGCACAGTGATTATACTGCTCACATGAATTCCCACAGGAACGTCCGACCCTACACCTGCAACTACTGTGGAgcccaattcattcgaaaaTACAACTGTCTAAGGCACGTCAAGGAGCATGAGGAAAATAAAGCATACACCTGCGATGTTTGCAATAAAACCTTTCACAGGTCCTACTACCTGAAAGAGCATTTACGGGTACATTCGGGCGCGCGGCCTTATACGTGCCATATCTGCGGCAAATCAAGCGGCACCAAATCCAATCACAACAAGCATGTCAGGATCCACCATGCGCGCGAACCCGTCAACACTGAGAAttaa
Protein Sequence
MEGTNIDEAAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASAGAGAGASASASASTAQGQQTQTQTQTPLSPVSLISTTSVQQPSHNTSHLAHNSQVSPQSPYPIGPVFECPPIGTVMPPQFASFSYQQFVNNGTVMIPQYAMAPQANQMMQMLYNPYSIYQQQQIPTVQMLSPVNTLPNTNRLRTVPTLANDTTPRPSITIPVNNNEPKEILPEILSEVEPEPEQEPNQQPDTHTGPESERMVTELDAVRIPPSLNHSDIIQQDHNGLGTQGVRRDHHQSPPIPPSIPITCNISNISNIIENDDADGGDEEDEDDDDEDDVDDDDDDEDDDDKAETVLPNIHNAQPTNPSIQLPSSICNISCRDVSTVQQQQQDLQEEYIHTTYKECVGENVSNEITLTVSEDKAKECRRINDRLTYNKDVQMADSIISPKRQSPSALSKESCQPVEVEQLEHLLITIMERELGSTTEEEAGKEERGEKRNEGTRQKALKDEADAVVKEGMCLEDGGGNNEIARETISPDVKLPLNTAMRLTVNDLDKNYYSTYRYKHSLSAPSSPISPKKAYHSYSTHSEFGSAENLNIYPVGFDASVLQDEDEEDEDEDEDEEEEEEEEEEDEDADEEIDEENDSEANENDEEKERLDLEENLDEADMEIEEIPSPHTPAAKSGESCDYVRSHTPLSTSSGISVLRVRKDLSKSCSPMSVHSFPHMETTGTNQEESSNNPDKLGTCFKTPINCLQLNEEANNLCQEVSLVEEEVDNKSVSQHINSTYHQPIITDNLNSFPTVSSVQQEVALSHDSYSAMASNKAQNSMSLPDSFEAAIAIETTESKSYHYSKPIVQKQSLELLNLNEDAHAGPMNVFEFDGLQILVPSTYINESSQKAVSATSQQSMASSEGAVGIDEEVKSINMRADETMPPRGELSEQESNGYTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKSPTKRTFKCYHCSEVFDCPKERRVHSTTVHKEAGPSSSGRQSNQGDQVEVKDIKLLDGRVNIFEDIFVPGLHVQQIYHHQQPLLHQLQPAQTPELNKLDSEGKADSAVVQLSVEVTCTICSQRFSSDKSLQLHHRRVHVAEASKRIRESAKCQICNEEFPSVLLFNAHLKVHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAHRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-