Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776662.1:93661-98613[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.032 2.8 8.7 2.2 1 23 434 456 434 456 0.96

2 18 0.014 1.3 9.8 0.6 2 23 492 513 491 513 0.97

3 18 9e-05 0.008 16.7 3.3 1 23 643 665 643 665 0.98

4 18 0.0033 0.29 11.8 1.1 2 23 669 690 668 690 0.96

5 18 0.00047 0.041 14.5 0.8 1 21 768 788 768 791 0.89

6 18 0.00024 0.022 15.3 0.5 1 21 797 817 797 821 0.92

7 18 0.013 1.2 9.9 1.7 2 23 912 933 911 933 0.95

8 18 0.00036 0.032 14.8 3.9 1 23 1046 1068 1046 1068 0.96

9 18 0.00032 0.028 15.0 0.7 1 20 1073 1092 1073 1094 0.94

10 18 0.00091 0.081 13.5 0.4 2 23 1105 1126 1105 1126 0.97

11 18 3.2e-05 0.0029 18.1 0.6 2 23 1165 1186 1164 1186 0.97

12 18 2.9e-05 0.0026 18.2 1.6 1 23 1191 1213 1191 1213 0.95

13 18 0.00012 0.011 16.3 2.8 1 23 1219 1241 1219 1241 0.98

14 18 5.2e-06 0.00046 20.6 0.4 1 23 1257 1279 1257 1279 0.95

15 18 4.2e-07 3.7e-05 24.0 0.6 1 23 1285 1307 1285 1307 0.99

16 18 4.6e-05 0.0041 17.6 0.2 1 23 1313 1335 1313 1335 0.97

17 18 0.00017 0.015 15.8 4.1 1 23 1341 1363 1341 1363 0.96

18 18 0.012 1.1 10.0 0.4 1 20 1369 1388 1369 1390 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.032	2.8	8.7	2.2	1	23	434	456	434	456	0.96
2	18	0.014	1.3	9.8	0.6	2	23	492	513	491	513	0.97
3	18	9e-05	0.008	16.7	3.3	1	23	643	665	643	665	0.98
4	18	0.0033	0.29	11.8	1.1	2	23	669	690	668	690	0.96
5	18	0.00047	0.041	14.5	0.8	1	21	768	788	768	791	0.89
6	18	0.00024	0.022	15.3	0.5	1	21	797	817	797	821	0.92
7	18	0.013	1.2	9.9	1.7	2	23	912	933	911	933	0.95
8	18	0.00036	0.032	14.8	3.9	1	23	1046	1068	1046	1068	0.96
9	18	0.00032	0.028	15.0	0.7	1	20	1073	1092	1073	1094	0.94
10	18	0.00091	0.081	13.5	0.4	2	23	1105	1126	1105	1126	0.97
11	18	3.2e-05	0.0029	18.1	0.6	2	23	1165	1186	1164	1186	0.97
12	18	2.9e-05	0.0026	18.2	1.6	1	23	1191	1213	1191	1213	0.95
13	18	0.00012	0.011	16.3	2.8	1	23	1219	1241	1219	1241	0.98
14	18	5.2e-06	0.00046	20.6	0.4	1	23	1257	1279	1257	1279	0.95
15	18	4.2e-07	3.7e-05	24.0	0.6	1	23	1285	1307	1285	1307	0.99
16	18	4.6e-05	0.0041	17.6	0.2	1	23	1313	1335	1313	1335	0.97
17	18	0.00017	0.015	15.8	4.1	1	23	1341	1363	1341	1363	0.96
18	18	0.012	1.1	10.0	0.4	1	20	1369	1388	1369	1390	0.89

Sequence Information

Coding Sequence: ATGGACGCCATCGAGATAGAAGCATCGGATAATTCTCAAGACGCAGAGCACGGGATTGTATCGAGCGCGGAGATATGCCGCGTCTGTCTCCTAGATAACTTGGCAATGCGTGATCTCTTCCTCGAGAGTGAGGTTGAATCACTCTCGGCCAAGGCGATGAGCTTTGCTAACGTCAAGATGTCCCCTGGCGATGGCTTACCAAGCCAAGTCTGTTGTATATGCGTGGAGAAACTAGAATCCGCGTACGAGTTCAAGCTTCAAGTGGAGCATGCCGACACTGTACTCAGGGAGAGATTCTTGACTATGAATATGAAGGAAGAACTATTCTTTAATGAAGTCGAGGTACACCTTGAATCAGACAGGCACCAACATACTGAAGATATATCCATGGACGCGATGCATTATCAAGCTGTCACAGCTGGTTTGACAGCAGCAGCCTCCGAGCATGTATGTTCCGAGATCAAGGATACTGGTATAGCTTTGTTACCAATTGACAAGGTGGATCAATTGGAACAACGCATAGCAGAACAGGAGAGTGAGCCAACTTCAAGCACCAACATTCAATCGGCATCTCATGCGGAGGAATTGCATTTTCTCCAAAGCAATTCCAAACAAAAAGTTGTCCACCAGTCAGACATGCCTATCATGATGGCAGAGACTATTGAAGAAAGGCCTGGCGAAATAGTCTCGGTCTCCATAAACCTCTCTTTCAAGCATGAAAATCAACCTGAGACCATCCCACCTGAAGAGCACGATTACATCTTGCACAATTCATCTCTTATGTCTGGCAGCAGAGAAATTTCCATTACTCAGCCTGATAATCGTCTTGTTACTGTAAACCCGGAGACAGCACACACCAACAATGAGGACCTTCTGGTCGAACCGCTTCTCTGCGATAAGGAAAAATCCAGCGAATCCAATGAGGAATCGGCAGAGTTTCATTTGCCAGAACTAAACAATAGCCAGGACGGCAGTGACAGAGAGTTGGCGGCTGACGATGAGCTGCCGCACGAGGACGAGAACGAGGACGGGAACGGAAATAAGAACGAGAACGGGGACGATAACGATGACGTTGACgatgacgaggacgaggacgaggacgaggacgaggaagcgGTTGCGAAAGTGGACGAGGCCTCCCAAATACAACAGATGCGCAGAAGCAAGCGTAATTTGAGACAAAAGAGCGGTAACGAGGATAACGATACGATCGAGGAGAGTTACTTTGAGAACTTGAATCTTAGTTCGCGCCTGAAGAAAGCTCAGGTAGAACAGGCGGGCAATAACGAAAAGGTGTTTTTCGCCTGTTATTTATGTGATAGGCAGTTCCTTACAAAGGACCTATTGAAAGAGCATTTGCACTCCCACGAAGAAGTTCGAAAAACTTTGCTGTTCAAGAAGGCACCAGAGAAAAGTCAAAAATCTGTCGGAGAGAGCCCGCAGAATATGCCACCATCTGGGAGAAAAGCTAACAAGTGCCCTTATTGCGGAAAGGAATACCTGTACATAATATCCTTCAACAAACATTTGAGGCaacacgagagagaaagggaggaagatGGGAAAGGTggtggagggggagggggaatgCCAGTGGAAGTGTCACTTGAAGAAGATGGGCAAAGCTTTGAGATTGAGGAGGACTATAGTAGCAGAAGGAAGTCGATAATGGAGAGtaggaagagaaggaggagataTCATACAAGTCCAAGTGAGGATGGTAATGAATGCAAGGTAGAAGTGGAGGAAATGGAAATGACGAGGAGGACTGCTGATTACTCGGAAGAGCCGGAAAAGAAATTGTGTCGAGACGAAGATGAGAAGCAAGAGGGTGGCGGCGCGTTGAATGAAAGAGGAGCCAGTGAAGCGACTGATAATAGGGCCGATGGCGGGAAACAGTGGCGAAAACGTTATTGTATCAGTGAGTTTCAATGCGAGAGGTGCTCGGAAACATTTTCCAATAAAAGGGATTTTCGTAAGCATCTTACCAGCCATCTTGGACTGAAATGCAGTGTATGCGAGCAAGAGTTTGACTCGCTAGAAAAACTTCGGAATCATCGCACAAAGCATGTTCTCGAAGGTGTCTTGACCGAGCAGGACCTTGAAGAGAACGCCAAACACGTTCAacagaagaagagagagaatgaaGAGGGTGCAGGTGGCGGGAATCTGCATGGAATCGCTGCCAGCGATGACAACCAAGAGAGTTATTATGATGACAACTTCAATAGCAATGCTGATGCGGACGGAGCTTTTGTTGGCAACAGAAAAGAGGCTGCCTCGCGCTCGGGGGGTTTGCATTACAATTGCAAACTTTGTGAGGAGCGGTTCGCAAGAAGAGACCTCCTCCAGAGGCATTCGGACCAGCAACATCCACAGGTGAAAGCGTATAAGTGTACAGAGTGCAATAAAACGTTTGGTAATGAGCTTACACTACGGAATCATCTTATTGCAACTAACCATAAGACATTTGTGCACGGCCAACAATACGATCCGAACAAGCGCATTAAACGCGTTGCTGCAAGAGCCGCGCAAAGAATCATAGACAAGATTAAGACGGAAGATGGTCTTGAAGATTtggaggacgaggaagaggatCAAGAGAATGAAGGTGGTAGTGATGGtgggggtggcggtggcggtggcggtcaGTCTTGCGACTTGGAGAGAAGCATGTACGGGCGTCGCAGGGATGCTACCGCACATAGAAGAACTTATGGAAAAAAGGATTTGGAATGCGCAAACTGCAGCAAACGGTGTGGTTCGAAGCAGGCTTTGAGTAAGCATATGGAGCAGCATACAAAAGAGGAGAAGATGGAGAAATTGGAGAAATTGGAGAAATTGGAGAAATCCAAGAAGTTGCATGTAGATAGGAAAGATGGTGGAGTGCAAAAGTATCCGAGAAACCCGGTCGTATGTGGGAGCAAGGACGGCAGCATtgagggagagcgagcaagTGCTGGGAGCCAAGTGCGTGTGACTGCTGCTGGCGGTAACGGATCTGGTAATTGCGGTggtggcagcggcagcggcagcgggtGTAGCAGTACTGCCGGAGGTATCGTTGGTACTGCTGGCGATGCTGATGATGACGATTCGGACTTTGAGAGTGGCTTAGATTGGCCAATGGACAATCACGAGTGTGCAACTTGTAAAAAGAGATATAGTACGAAAAAGTCGTTATTAAGGCACCAATTGCTCCACGAGGAACCAAACTTCGAGTGTGACATTTGTAATGTCAAGTTCTATCGAAAGGACAAACTAAAGGCTCATTATGACAAGTGCTCGGAAAAGAATCCAGATCAAGTGAGAAAGTGCAATATTTGTGGCGATAGTTTCGAGAATAATGAGATGTTGAGGGAACATAGGGCAAAGCACGTGACCGAAGGGATTTTGACGGAAGAAGACTTGCGGGACATCGAGCCGCGTCCGGAGGAAAAGCGGCAAGGGGAAAGGGTTGGTAGAAAGAGACGAACCGATATCGTCGGCCTGGAATGCACCGAGTGTAACAAGCAATACACCTCGAGAAAGGGACTGTTGCGGCACATTCAAGTTCACGAAGGGAAAAAGTATCTATGCGATATATGTCCAAAGAAGTTTTACAGAAGGGAGCACCTTAAGATCCATGTCGCTAAGCACAATATGATCAAGCCGTACAAGTGCAATCGCTGTACAAAGCGGTTCATCAAGGAGGAACAGCTGACCAACCACTTATCCAAACATGACCGTACTTTCAAGAAGAACAAAGAAACCGATAGTACAAAGAGATTCCTTTGCGAGATCTGTTCAAAGAGCTTTACGCAGTCAACAACTCTAATTGCTCACTTACGGGCACACAATGGTATTAAACCCTACGTGTGCGAAGTTTGCTCGCGGCCCTTCACTACCAATGCCTACTTGAAAATGCACATGAGAACACATACACAAGAACGACCGTACATTTGCCAGTATTGCTCGCGTGCATTCGCCAGGGCAGACACACTCGCCAATCACCTAACGTCCCACACTGGCGAGGCCAAGTATCATTGCAAGTATTGCCCAAAGAATTTCCGACGCTTAAAATCCCTCAAAGAGCATGTTTTCATCCATACCGGACAAAGGCCCTATGCCTGCCCTACTTGTGACCGCAGGTTTAACAACAATGGTAGTCGTTATGCTCACAGTAAGCGATGTAAGCAAAACTTTGCGCAAAATCAGAATCGGGCCCAGAGCATAGCTTCGGCTCCGCTGCAAACCATCAATCAACATCAAAATCCAAATCAGCAAAGGCTTCAGCAGTCCACTATACCAACCAGTCAAATAGTTAAAGCCCAAAATATTAAGACGATAGCAATTACAAGGCAACCTGATCCCATAGCGACGCAGCAGGTCATGCAACACCAGGAAATACTGATGCCTCTGATTTTCGAAATTTTGCCAGAGGGTACAAAAATATTCACCACTACTTAA
Protein Sequence: MDAIEIEASDNSQDAEHGIVSSAEICRVCLLDNLAMRDLFLESEVESLSAKAMSFANVKMSPGDGLPSQVCCICVEKLESAYEFKLQVEHADTVLRERFLTMNMKEELFFNEVEVHLESDRHQHTEDISMDAMHYQAVTAGLTAAASEHVCSEIKDTGIALLPIDKVDQLEQRIAEQESEPTSSTNIQSASHAEELHFLQSNSKQKVVHQSDMPIMMAETIEERPGEIVSVSINLSFKHENQPETIPPEEHDYILHNSSLMSGSREISITQPDNRLVTVNPETAHTNNEDLLVEPLLCDKEKSSESNEESAEFHLPELNNSQDGSDRELAADDELPHEDENEDGNGNKNENGDDNDDVDDDEDEDEDEDEEAVAKVDEASQIQQMRRSKRNLRQKSGNEDNDTIEESYFENLNLSSRLKKAQVEQAGNNEKVFFACYLCDRQFLTKDLLKEHLHSHEEVRKTLLFKKAPEKSQKSVGESPQNMPPSGRKANKCPYCGKEYLYIISFNKHLRQHEREREEDGKGGGGGGGMPVEVSLEEDGQSFEIEEDYSSRRKSIMESRKRRRRYHTSPSEDGNECKVEVEEMEMTRRTADYSEEPEKKLCRDEDEKQEGGGALNERGASEATDNRADGGKQWRKRYCISEFQCERCSETFSNKRDFRKHLTSHLGLKCSVCEQEFDSLEKLRNHRTKHVLEGVLTEQDLEENAKHVQQKKRENEEGAGGGNLHGIAASDDNQESYYDDNFNSNADADGAFVGNRKEAASRSGGLHYNCKLCEERFARRDLLQRHSDQQHPQVKAYKCTECNKTFGNELTLRNHLIATNHKTFVHGQQYDPNKRIKRVAARAAQRIIDKIKTEDGLEDLEDEEEDQENEGGSDGGGGGGGGGQSCDLERSMYGRRRDATAHRRTYGKKDLECANCSKRCGSKQALSKHMEQHTKEEKMEKLEKLEKLEKSKKLHVDRKDGGVQKYPRNPVVCGSKDGSIEGERASAGSQVRVTAAGGNGSGNCGGGSGSGSGCSSTAGGIVGTAGDADDDDSDFESGLDWPMDNHECATCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEMLREHRAKHVTEGILTEEDLRDIEPRPEEKRQGERVGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCNRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSTKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFAQNQNRAQSIASAPLQTINQHQNPNQQRLQQSTIPTSQIVKAQNIKTIAITRQPDPIATQQVMQHQEILMPLIFEILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -