Basic Information

Insect: Crossocerus cetratus
Gene Symbol: -
Assembly: GCA_963675795.1
Location: OY776663.1:9073317-9077566[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 1.4e-05 0.0013 19.2 0.3 2 23 87 108 86 108 0.96

2 28 2.1e-05 0.0019 18.7 1.4 1 23 110 133 110 133 0.94

3 28 0.27 23 5.8 4.9 1 23 138 161 138 161 0.94

4 28 5.2e-06 0.00046 20.6 2.2 1 23 167 190 167 190 0.97

5 28 0.032 2.9 8.7 1.5 3 23 198 219 197 219 0.97

6 28 0.00024 0.021 15.4 0.1 1 23 224 246 224 246 0.97

7 28 1.9e-07 1.7e-05 25.1 0.2 1 23 252 274 252 274 0.98

8 28 3.5e-07 3.1e-05 24.3 0.0 1 23 280 302 280 302 0.98

9 28 0.00055 0.049 14.2 0.7 1 23 308 330 308 330 0.98

10 28 5.6e-06 0.00049 20.5 0.3 1 23 391 413 391 413 0.97

11 28 2.8e-05 0.0024 18.3 2.3 1 23 419 441 419 441 0.99

12 28 0.014 1.2 9.8 0.8 1 23 447 469 447 469 0.96

13 28 5.8e-06 0.00051 20.5 1.3 1 23 475 497 475 498 0.96

14 28 0.0014 0.12 13.0 3.1 1 23 515 538 515 538 0.97

15 28 0.00018 0.016 15.8 1.4 1 23 546 568 546 568 0.95

16 28 1.7e-07 1.5e-05 25.3 0.3 2 23 575 596 574 596 0.97

17 28 0.00028 0.024 15.2 2.8 1 21 602 622 602 624 0.95

18 28 1.3e-06 0.00011 22.5 0.7 1 23 630 652 630 652 0.98

19 28 3.2 2.8e+02 2.4 0.2 2 23 694 716 693 716 0.90

20 28 1.6e-05 0.0014 19.1 1.3 1 23 722 745 722 745 0.98

21 28 0.2 18 6.2 0.8 2 23 751 772 750 773 0.94

22 28 0.00057 0.05 14.2 0.3 3 23 780 800 779 800 0.98

23 28 0.042 3.7 8.3 0.5 2 23 807 829 806 829 0.93

24 28 0.00021 0.018 15.6 2.6 1 23 850 873 850 873 0.90

25 28 0.0015 0.13 12.8 0.1 1 23 884 906 884 906 0.96

26 28 0.0074 0.65 10.7 3.6 1 23 912 934 912 934 0.94

27 28 5.2e-07 4.6e-05 23.8 1.7 1 23 940 962 940 962 0.98

28 28 0.00052 0.046 14.3 0.3 1 21 968 988 968 989 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	1.4e-05	0.0013	19.2	0.3	2	23	87	108	86	108	0.96
2	28	2.1e-05	0.0019	18.7	1.4	1	23	110	133	110	133	0.94
3	28	0.27	23	5.8	4.9	1	23	138	161	138	161	0.94
4	28	5.2e-06	0.00046	20.6	2.2	1	23	167	190	167	190	0.97
5	28	0.032	2.9	8.7	1.5	3	23	198	219	197	219	0.97
6	28	0.00024	0.021	15.4	0.1	1	23	224	246	224	246	0.97
7	28	1.9e-07	1.7e-05	25.1	0.2	1	23	252	274	252	274	0.98
8	28	3.5e-07	3.1e-05	24.3	0.0	1	23	280	302	280	302	0.98
9	28	0.00055	0.049	14.2	0.7	1	23	308	330	308	330	0.98
10	28	5.6e-06	0.00049	20.5	0.3	1	23	391	413	391	413	0.97
11	28	2.8e-05	0.0024	18.3	2.3	1	23	419	441	419	441	0.99
12	28	0.014	1.2	9.8	0.8	1	23	447	469	447	469	0.96
13	28	5.8e-06	0.00051	20.5	1.3	1	23	475	497	475	498	0.96
14	28	0.0014	0.12	13.0	3.1	1	23	515	538	515	538	0.97
15	28	0.00018	0.016	15.8	1.4	1	23	546	568	546	568	0.95
16	28	1.7e-07	1.5e-05	25.3	0.3	2	23	575	596	574	596	0.97
17	28	0.00028	0.024	15.2	2.8	1	21	602	622	602	624	0.95
18	28	1.3e-06	0.00011	22.5	0.7	1	23	630	652	630	652	0.98
19	28	3.2	2.8e+02	2.4	0.2	2	23	694	716	693	716	0.90
20	28	1.6e-05	0.0014	19.1	1.3	1	23	722	745	722	745	0.98
21	28	0.2	18	6.2	0.8	2	23	751	772	750	773	0.94
22	28	0.00057	0.05	14.2	0.3	3	23	780	800	779	800	0.98
23	28	0.042	3.7	8.3	0.5	2	23	807	829	806	829	0.93
24	28	0.00021	0.018	15.6	2.6	1	23	850	873	850	873	0.90
25	28	0.0015	0.13	12.8	0.1	1	23	884	906	884	906	0.96
26	28	0.0074	0.65	10.7	3.6	1	23	912	934	912	934	0.94
27	28	5.2e-07	4.6e-05	23.8	1.7	1	23	940	962	940	962	0.98
28	28	0.00052	0.046	14.3	0.3	1	21	968	988	968	989	0.96

Sequence Information

Coding Sequence: ATGTGTTTTAGTTTGTCGGCGGAGGACCCACTGAATGGTACAGACACGGACATCTACAAGATCATCATACCGAGCAAATACCGTCGCAAACTACCAAGAAGACCAGTGAAGCGCCTCTTGAGAATCGACATACGAAATATCATGGGACAATCGAAATGCAAGGAGAAGCCTGCTCCGAGAAGCGAGCCGGTGATTAACGAGGTGGAGAAGCCCGAAGAGCGAGCAGAGAGTCCGGAAGCACCGAAGCTCGCGCAACTGGTGTGCGATTACTGCGGCAAGAAGTTCCCGGACAAGTCAATACTGATATCGCACATGAGATTCCACAAGTACCAGTGCCAGGAATGCCAGGAGACCTTCACCTTCAGGCGGGAGTTGAAGAAGCATATCTACGAGGCGCACGGCCCTCGGCTCTATCCGTGCAGCATGTGCGAGTACAAGAGCACCAACAAGTGCACCCTCAAGGACCACTTCACGCGCAAGCACACGAGCAACTTCGAGTACAAGTGCAAGGTCTGCGACAAGCAGTTCAAGATCAAGAACGACCTGAAGCAGCACATGAAGCAAATTCATACCGATGCGCCGCCGATCCTCTGCACGATCTGCGGACATGCTTGTAAGAACATACCGGCCGTCAAGGCGCACATGAAGTACCGGCACAATAAACCGGCGTACGAGTGTCCGATCTGCAAGCGAGGATTGACCACACAGGAGTATCTCGATCAGCACATCCTCTGGCACGAGAGGAAAGAGAAATTCGTCTGTCCGACGTGCGGCAAGACTTTCGGCCAGAAAAGGGACTTAGAGATTCATCTGAGGATCCATCAGGGCATCAGACCGTACTCGTGTCCAGTCTGCGGGAAGGCCTTCCCAAGGAAAACTGGTCTCGAGCAACATATCCTCATTCACACCGGCAAAAGGCCATACACCTGTGATATCTGTGGGCAAGCCTTCGCCCAAAAGCCTGGACTCATCTGCCACAGAAAGCGACACCCCGGTCCTCTGCCGCCGTTGCCCGTTGTCTCCATCAAGAAGATCGTCGACGACTTCACCGAAGAATCTCGGCGAACAAAGGCACGCGCGGTCCACGAGTGCATCAAGTGCGCGGCTTGCTTCTACCATACGAGGAAATTGGTCGAACATCTGAAGAACCTGCACGGGATCGATCGGGCTTTCAGCTGCGACGAGTGCGGCAAGACCTTTAGGAGTCCGATGAACATAGCGCGCCACAAACTCATCCACACCGGCCAGCGGAGATTCAGGTGCGATCTCTGCGAGTACACGTCGAACCAGAAGTCGAATCTCGAGCAGCATCGTCGCAGGCACGCGAGGGATTACGCGTACAAGTGCGAGATGTGCGAGAAGAGCTTTCTCCTCAAGACGCAGTATCTCGAGCACGTCAACGTCCATACCAGGCAAAAGCTCTTCAAGTGCGAATACTGCCCTAAAGCTTATCCCTACAAGAGGAACTTAACGGCGCATGTTAAGGCCCACCACGCCAGTCTTTTACCTCCTGAGAAGAGTCAGGGAGAAACGGAACACAAGCATGTCTGCACTTTGTGCTTGCAATCTTTCAGACAAAAGCTCCTGCTCGAGAAACACCTGAAGAAGCAACACCAGCTAAAGGACACGAGGAAGTTCCTTTGCGATCTTTGCGGCAAATCCCTGTCGTCCAAGAGGCGTTTGACGGTACACACGCGACGGCACCTTAACGAGAAATCGGTGACCTGTGATTTGTGCGGCAAAGCATTCACCGACAAGGAGAATCTTAAGATCCACGAGAGGACTCACACGGGAGAGAAACCGTATGCTTGCTCGCAATGCGGTAGGCGATTCACGCAGCGAACGTCGTTGGTATTGCATCTCCGCTGCCATTCCGGAGAGAGGCCCTTTCAATGCACTGACTGCGGCAAGGGATTCATCACTGCTGTTTTTCTGAGAAAGCATCGAAAGATCCATGAAAAGGATAATACACTCGAGTGGGGCAATAATCACCATCAGCTCGATCCCTGTGAAGAATACAAGATCAAGAATGACGGCATCTTTGCTGATTCCGAACAGAAATTCGAGGCCAATGAGAAGTCTTGCGAGCTCTGTCAAGAGAAGTTCCTCTTCGTGACTAGATTGGTAGCCCATTTAAGGATCGTCCATGGAATCCACCGACCCTTTAAGTGTCTCACCTGTGACAAGACATACCCTCAACAGTTCATGCTGAATGCCCACATAAAGAAATCACACACCCCCAAGATCATTCCGTGCGAACAATGCAAGTTCATGGGGGTGAACGAGATCGACGTGAAACGGCACACGAGGCGGCATCACCGAGATATGACAATCCTTTGCGAGATATGCCATGAGAATTTCGTAGATAAGGAGGCACTGATGACACACACCGCGATGCATGATTTCATGCAGTATCAACAATGCAAACCTTGCGGCAGTACGTTCGACGATTTATACAGTTTAAAGGAACACAACCGCCTCTACCACTTTGACCCTGCAGCCCTCGGCCTGGTGAAGTCTGAGGCAGTGAGTCACGAGACGTTCAAGCACAAGTGCGACATTTGTGATAAAACTTACAAGTACAAATCAGTATTGAAGCAGCACAAGGTCAATGCGCACGCGGAGGCGCCGCGTTTCGAGAGGCGGCGTTATCTGTGCGCCCTTTGCGGCAAGGAACTCAAGACTGCCAAGGGACTGGAGATTCACAACAGGACCCACACCGGCGAAAAGCCGTACACCTGCGAAATCTGCGGCAAGTGCTTCGCCTGCGAGACTCTCCTCAGAACTCATAACGTCACACACACTGGCGAACGAAAGTACTCGTGCGATCAGTGCGGGAAATCATTCACGCAACGCTCCACTCTGGTCGTACATAAGCGCTACCACACAGGCGAAAGGCCATACGTATGCTCGCGTTGCGGTAAGGGCTTCGTTACTAGGACTGTCATGAACACCCACATGAAATCGTGCCGCTAG
Protein Sequence: MCFSLSAEDPLNGTDTDIYKIIIPSKYRRKLPRRPVKRLLRIDIRNIMGQSKCKEKPAPRSEPVINEVEKPEERAESPEAPKLAQLVCDYCGKKFPDKSILISHMRFHKYQCQECQETFTFRRELKKHIYEAHGPRLYPCSMCEYKSTNKCTLKDHFTRKHTSNFEYKCKVCDKQFKIKNDLKQHMKQIHTDAPPILCTICGHACKNIPAVKAHMKYRHNKPAYECPICKRGLTTQEYLDQHILWHERKEKFVCPTCGKTFGQKRDLEIHLRIHQGIRPYSCPVCGKAFPRKTGLEQHILIHTGKRPYTCDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKKIVDDFTEESRRTKARAVHECIKCAACFYHTRKLVEHLKNLHGIDRAFSCDECGKTFRSPMNIARHKLIHTGQRRFRCDLCEYTSNQKSNLEQHRRRHARDYAYKCEMCEKSFLLKTQYLEHVNVHTRQKLFKCEYCPKAYPYKRNLTAHVKAHHASLLPPEKSQGETEHKHVCTLCLQSFRQKLLLEKHLKKQHQLKDTRKFLCDLCGKSLSSKRRLTVHTRRHLNEKSVTCDLCGKAFTDKENLKIHERTHTGEKPYACSQCGRRFTQRTSLVLHLRCHSGERPFQCTDCGKGFITAVFLRKHRKIHEKDNTLEWGNNHHQLDPCEEYKIKNDGIFADSEQKFEANEKSCELCQEKFLFVTRLVAHLRIVHGIHRPFKCLTCDKTYPQQFMLNAHIKKSHTPKIIPCEQCKFMGVNEIDVKRHTRRHHRDMTILCEICHENFVDKEALMTHTAMHDFMQYQQCKPCGSTFDDLYSLKEHNRLYHFDPAALGLVKSEAVSHETFKHKCDICDKTYKYKSVLKQHKVNAHAEAPRFERRRYLCALCGKELKTAKGLEIHNRTHTGEKPYTCEICGKCFACETLLRTHNVTHTGERKYSCDQCGKSFTQRSTLVVHKRYHTGERPYVCSRCGKGFVTRTVMNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633787;
90% Identity: -
80% Identity: -