Basic Information

Gene Symbol
zbtb8a.2
Assembly
GCA_907269065.1
Location
OU026072.1:8100096-8108850[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.00024 0.019 16.0 3.5 1 23 315 338 315 338 0.96
2 9 0.00076 0.059 14.5 2.8 1 23 345 367 345 367 0.94
3 9 0.13 10 7.4 0.5 1 17 371 387 371 388 0.92
4 9 6.9e-05 0.0053 17.7 4.6 2 23 398 420 398 420 0.97
5 9 0.0016 0.13 13.4 0.2 1 23 424 447 424 447 0.96
6 9 0.031 2.4 9.4 0.1 2 20 465 483 464 485 0.93
7 9 0.0013 0.1 13.7 4.3 2 23 509 531 508 531 0.96
8 9 0.93 72 4.7 0.0 3 23 542 561 541 561 0.95
9 9 1.8e-06 0.00014 22.8 1.7 1 23 567 590 567 590 0.98

Sequence Information

Coding Sequence
ATGAGTGACCTAAAAATTTGTCGCATTTGCCTCATCAAAGATGTACGAGGCTACAAGATGGATCAATACCATCTGAGGCTGTGCTACGAACAAATAATGAGGGCGAAAGTGAATGACAGAGAAGGTCTCCCATTGTGGTTCTGCTATGAATGTGCCACAATGTTGCACAAATTTGAAAAGTTTAAGATTAAATGTGCGAAGGGACAGACAACTTTACGGCAGATGCACTGGAGCAGAGGTATCACATATGAATCAGTTGGCATAATCAACAGATTCAGCGAGAAGCTAATATCACCCATCGGAATCATCATGTCCAATAAACGAGTTAAGACTTGCTTTTCCAAACACAAAGGCTTTTCTCCCGTTAAGAAGACAGAGGAACATAACACCCAATTCATTCATGAAACAAGTTTTGAAAATATTACATTGCCTTTTGAAGAAGAAAAGATATTCCCAGCTGTTAATCCACTCGAGAAAGAAATCAAAGAAGAAGCAGAAGTATTGAAAGATGATCAAAAAGCTGAAGCTCAAGTAAATGATTTTGACATAGACATGGGTGCGGACAATACAATAGACACTGATGATGATGACCTCTTCATAGATCCATCTAAACAAATCCAAAAAGCCCCAAACACAAACAACGATATAAACATAGACAATATAATGAACGAAATAATGTCAAGCGATGTGGACATGGAAAAGCCTGAAGTTGAAGTGGCACCAAAGCCAAAGAATGGCAAAAAACCGGTTAAAAAAGGTTACAAAAATGTTTATGGTATATTAATACCAAAAACACCATCTGATAAACCTAAGGCAAAGAAATTTGAGACAAAGAAGAGGGATATGAATCCGGAGCATTGGAAGAAAATTAATATGACCGAAGAGGAAGCTATGTTAGAAGTCAAGCAGAGGGCAAACTCAGATAAGTTTTTGAAGGCTAATTTCAAATGTCACGAATGTTTCAAGGGTTTCTCTAAGCTTGATATGTTAATGAGGCATGCGAAGCAATATCATGATGAGGCGGTGGGTTCGTTCCTGTGTCGTTTCTGCCACATGCGTTTCCCTCGCAAGTGGGCGCTAACGAGGCATATGACGGAGCACTACCTTATGTTCGAGTGTCGACGGTGTGATATGCGGTTTAGAGAGAAATCGGCTCTGTTCCACGACGATGTCCACAATGGTGTGATAAGAAAGTGCGAGCACTGCGGTAAAGAATTTGTCCATTCGTCCACTTACTACACTCACCTCCGGATGACGCATCGCAGCAATCACATCTGCACTCTGTGCGGGGCGTCCTTCGTCAGTGAGCTGGGCTTGTTGAAGCACAAGAGGATAGCTCATTATGAGGAAAAAGATGCCGAAACATCAACCGCAAACGACGCCCAAGAGATATATTGCGACAAATGCGACGTAAAGTTTATGACGTGGCGCGCCTACAACGAGCACCTGTCAAACTCGAACAACCACGGCGACGCGACCGAAAATATAAAAGCAAAGGACTTCCGGCAGAAGAAAATACCAACCTCTTGCACACATTGTGGACAGAACTTCCCTTCGAGACAGGCGTATAAGAAACACCACCTCACAGACCACAGCCACGTGCCATTTGACGATAGAGCTATCTGCGAAGTTTGCGGCGTCTCTCTATCAGCGGGCAGCGTGGCCCAGCACATGGTGACGCACACAGGCGAGCGCCCGTACCCATGTACGATGTGTGACAAGCGGTTCACACAGAAGTCTGCCATGAAAATGCACTACAAGACTGTGCATCTCAAACAACCCTACCCCAAGAAACCGTACAGAAGAAAAAAGAAGACAGAAGAGATACCGCAGAACGACTTCACAGCATTTATAAGACCTGGTTACTACTCATAG
Protein Sequence
MSDLKICRICLIKDVRGYKMDQYHLRLCYEQIMRAKVNDREGLPLWFCYECATMLHKFEKFKIKCAKGQTTLRQMHWSRGITYESVGIINRFSEKLISPIGIIMSNKRVKTCFSKHKGFSPVKKTEEHNTQFIHETSFENITLPFEEEKIFPAVNPLEKEIKEEAEVLKDDQKAEAQVNDFDIDMGADNTIDTDDDDLFIDPSKQIQKAPNTNNDINIDNIMNEIMSSDVDMEKPEVEVAPKPKNGKKPVKKGYKNVYGILIPKTPSDKPKAKKFETKKRDMNPEHWKKINMTEEEAMLEVKQRANSDKFLKANFKCHECFKGFSKLDMLMRHAKQYHDEAVGSFLCRFCHMRFPRKWALTRHMTEHYLMFECRRCDMRFREKSALFHDDVHNGVIRKCEHCGKEFVHSSTYYTHLRMTHRSNHICTLCGASFVSELGLLKHKRIAHYEEKDAETSTANDAQEIYCDKCDVKFMTWRAYNEHLSNSNNHGDATENIKAKDFRQKKIPTSCTHCGQNFPSRQAYKKHHLTDHSHVPFDDRAICEVCGVSLSAGSVAQHMVTHTGERPYPCTMCDKRFTQKSAMKMHYKTVHLKQPYPKKPYRRKKKTEEIPQNDFTAFIRPGYYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00143341;
90% Identity
-
80% Identity
-