Basic Information

Insect: Crocallis elinguaria
Gene Symbol: -
Assembly: GCA_907269065.1
Location: OU026076.1:16663608-16666210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.14 11 7.4 0.2 2 23 99 121 98 121 0.91

2 9 9.6e-05 0.0075 17.3 0.8 1 23 142 164 142 164 0.98

3 9 7.5e-05 0.0058 17.6 0.2 1 23 168 190 168 190 0.98

4 9 0.027 2.1 9.6 1.2 1 23 197 220 197 220 0.96

5 9 0.012 0.94 10.7 0.4 2 23 226 248 225 248 0.96

6 9 8.1e-05 0.0063 17.5 0.3 1 23 254 277 254 277 0.96

7 9 2.5e-05 0.0019 19.2 0.1 1 23 283 305 283 305 0.98

8 9 2.8e-06 0.00022 22.1 2.6 1 23 311 333 311 333 0.98

9 9 0.015 1.2 10.4 6.7 1 23 339 361 339 362 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.14	11	7.4	0.2	2	23	99	121	98	121	0.91
2	9	9.6e-05	0.0075	17.3	0.8	1	23	142	164	142	164	0.98
3	9	7.5e-05	0.0058	17.6	0.2	1	23	168	190	168	190	0.98
4	9	0.027	2.1	9.6	1.2	1	23	197	220	197	220	0.96
5	9	0.012	0.94	10.7	0.4	2	23	226	248	225	248	0.96
6	9	8.1e-05	0.0063	17.5	0.3	1	23	254	277	254	277	0.96
7	9	2.5e-05	0.0019	19.2	0.1	1	23	283	305	283	305	0.98
8	9	2.8e-06	0.00022	22.1	2.6	1	23	311	333	311	333	0.98
9	9	0.015	1.2	10.4	6.7	1	23	339	361	339	362	0.95

Sequence Information

Coding Sequence: ATGATGTCCAGGGTCCTGATCCTGATGATGGAGCCGGAAGGAGCCATCAACATAAAATGGAGAAAGAAACTCTACAGGAATGGGGATGCGCGCGATAACGCGGCCGTCATACTGGAGTGTTCCAATGTGTGTCCTTTCAAATTTCATCGAAACGCATTTGGATGCGCGTACTGCCCCTTTACGTCACCAGAGTTTGGTCTCATCAAAGAACACACCAAAGAACATCAGGATAAGGTTCAAGCTCTGCGCGACGTAGGTTACCATTCGGTTTTAAAAGCTGACGTTACCAATCTGAGATGCGAACTCTGTCAAAAAAGTATGAAAGATGTAACGACGTTGTTTGAACACCTGATCGATGAACACGAAAAACCGAAAGCAGGGAATCACAGTTCGGGTATCGTGCCTTACTTATTGAGCGATGGATTTCGATGCGCCGACTGTGATGTTACTTTTGATCGATTCTTGAAGTTAAATAAGCATATGACGGTTCACTACCCTTACTTCGTGTGCTCCGAATGCGGCCAAGCTTTCTTCAGTGCGATAAGACTGAAAGCTCATTATCTGACCCATACAGAGAAGACAACACAGTTCAAATGCTCCAAATGCGGCGAAATCTTACCAACGGACTATCGTAGGCGTAAACACATGTTGTCTAAGCACAATATCTACAGTAATAAATGTCCGTTTTGCCCCGAAAAATTCAAAGAATACGCAGATAGGTTGGCGCATTTAAATAAATTTCACGATCAGAAAATATGCTATCCGTGCACTATGTGTCCTAAAGTTTTTAAGACCGCTTCGGGTAAGTCAAGCCATGTGAAAAGTATTCACATTAAAGACAAGTCATTCGTCTGCACGGTTTGTAGCAGTATGTTTATTACACCTGGTGAATTGAGGAATCATATGATCAAGCATGGCGGAGAAAAGATTCATGAATGCCAAGTTTGTAAGAAATCCTACGCGAGGAAGAAAACTTTGGTACAGCATATGCGTATACACAACAACGACAGGAGATTCGTTTGCCCCTGTTGTAGCAACGCATTTGTGCAGAAATGCAGTCTGACGAGCCATATGAAAACGCATCATCCTTGTGAGGTGTTGCCGACAGCAAAGCAGTTATAG
Protein Sequence: MMSRVLILMMEPEGAINIKWRKKLYRNGDARDNAAVILECSNVCPFKFHRNAFGCAYCPFTSPEFGLIKEHTKEHQDKVQALRDVGYHSVLKADVTNLRCELCQKSMKDVTTLFEHLIDEHEKPKAGNHSSGIVPYLLSDGFRCADCDVTFDRFLKLNKHMTVHYPYFVCSECGQAFFSAIRLKAHYLTHTEKTTQFKCSKCGEILPTDYRRRKHMLSKHNIYSNKCPFCPEKFKEYADRLAHLNKFHDQKICYPCTMCPKVFKTASGKSSHVKSIHIKDKSFVCTVCSSMFITPGELRNHMIKHGGEKIHECQVCKKSYARKKTLVQHMRIHNNDRRFVCPCCSNAFVQKCSLTSHMKTHHPCEVLPTAKQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -