Basic Information

Insect: Crocallis elinguaria
Gene Symbol: ZNF275
Assembly: GCA_907269065.1
Location: OU026074.1:1341942-1349525[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.011 0.89 10.8 0.6 1 23 13 36 13 36 0.93

2 8 0.0066 0.51 11.5 0.6 1 23 41 64 41 64 0.94

3 8 0.00011 0.0088 17.1 0.2 2 23 78 100 78 100 0.97

4 8 0.076 5.9 8.2 0.1 1 23 127 150 127 150 0.94

5 8 3.6e-05 0.0028 18.6 0.2 3 23 167 187 165 187 0.95

6 8 2.2e-06 0.00017 22.4 2.0 1 23 193 215 193 215 0.95

7 8 2.2e-07 1.7e-05 25.6 1.5 2 23 221 242 220 242 0.96

8 8 0.00065 0.051 14.7 3.3 1 23 248 271 248 272 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.011	0.89	10.8	0.6	1	23	13	36	13	36	0.93
2	8	0.0066	0.51	11.5	0.6	1	23	41	64	41	64	0.94
3	8	0.00011	0.0088	17.1	0.2	2	23	78	100	78	100	0.97
4	8	0.076	5.9	8.2	0.1	1	23	127	150	127	150	0.94
5	8	3.6e-05	0.0028	18.6	0.2	3	23	167	187	165	187	0.95
6	8	2.2e-06	0.00017	22.4	2.0	1	23	193	215	193	215	0.95
7	8	2.2e-07	1.7e-05	25.6	1.5	2	23	221	242	220	242	0.96
8	8	0.00065	0.051	14.7	3.3	1	23	248	271	248	272	0.96

Sequence Information

Coding Sequence: ATGGTCAATCATTACCATCAACATAAAGGGAAGCAGTACACGTGTGAACCCTGCAACATCACTTACAAGAGTATGTCTGCATATCGCACGCACATGGGCCAGCGGCACCGCGGCGGCGGGCACGTGTGCACGGCCTGCGGGCGGGAGTTCATATCCCGCATGGGACTCATCTACCACAAGTCGAAGGTGCATAAGTCCGACGTTCCGGTACCGGACAGCGTGTCCGGTGCGACGTGCGAGGAGTGCTCGCTGACTTTTCCCTCCAAGGAAGTGCTCCTGAAACACATCCGGGTCACGCACGAGGGAAAAACTGCTCTGGGCTACAACTCTGCAAACCCAACTGTGCGTCGGCAACCGGCTGTTCGGAAGATGCCAGTATTCACGTGTCGAGTGTGCAACGCCACGGGGCGCAGCAACGGCTGGCTGGTGCTGCACTTCGAGATGGAGCACCCCGCGGCCGACATGGAGCACCTGTACGCCGACAAGAGGAAGCACCTGTGCGACGTCTGCGGGAAGGGGTTCGCGACCCTAAACGCGTTACGCGAGCACCAGAACGCCCACACGGGCGCGCGTCCGTTCGCGTGCCCGCACTGCCCCAAGCGCTTCTCGCGCGCCGTGTCCCTCACGCACCACCGGGCGCTCCACGCGCCGCCAGCGAAGCCCTGCTCCGTCTGCGGGAAGAAGTTCCGCTCGCAGTCTAACCTTTACAATCATATGCAGTTCCACATCGGCGATCGTCGCTTTAAGTGCAGTTATTGTGGTAAGGGGTTCCTTCACCGGAGCACCATGAACGAGCACGTGCGAGGGGTCCATCATAACGTGAGGCGAGTGAGGAAGGCGGGGGTCACTGCAGCCAGGGGTCTGTCTTTGGAAAAGGAGAGCGAGTAA
Protein Sequence: MVNHYHQHKGKQYTCEPCNITYKSMSAYRTHMGQRHRGGGHVCTACGREFISRMGLIYHKSKVHKSDVPVPDSVSGATCEECSLTFPSKEVLLKHIRVTHEGKTALGYNSANPTVRRQPAVRKMPVFTCRVCNATGRSNGWLVLHFEMEHPAADMEHLYADKRKHLCDVCGKGFATLNALREHQNAHTGARPFACPHCPKRFSRAVSLTHHRALHAPPAKPCSVCGKKFRSQSNLYNHMQFHIGDRRFKCSYCGKGFLHRSTMNEHVRGVHHNVRRVRKAGVTAARGLSLEKESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -