Basic Information

Insect: Crocallis elinguaria
Gene Symbol: -
Assembly: GCA_907269065.1
Location: OU026076.1:17191308-17193469[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00039 0.03 15.4 2.4 1 23 46 68 46 68 0.98

2 14 1.4 1.1e+02 4.2 0.0 2 23 93 115 92 115 0.90

3 14 0.00037 0.029 15.4 0.1 1 23 162 184 162 185 0.96

4 14 0.002 0.16 13.1 1.0 3 23 192 213 192 213 0.97

5 14 0.00032 0.025 15.6 1.2 2 23 216 238 216 238 0.97

6 14 1.7 1.3e+02 3.9 3.6 1 23 318 341 318 341 0.93

7 14 9.4 7.3e+02 1.6 0.0 3 22 370 389 368 391 0.85

8 14 0.0084 0.65 11.2 0.1 2 22 416 436 415 438 0.89

9 14 0.00046 0.035 15.2 0.2 2 23 444 466 444 466 0.94

10 14 0.0022 0.17 13.0 1.5 2 23 471 493 470 493 0.94

11 14 0.006 0.46 11.6 0.5 1 23 498 521 498 521 0.96

12 14 1.5e-05 0.0012 19.8 3.9 1 23 525 548 525 548 0.97

13 14 0.0057 0.44 11.7 2.7 2 23 555 576 554 576 0.96

14 14 9.7e-06 0.00075 20.4 0.9 1 23 582 604 582 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00039	0.03	15.4	2.4	1	23	46	68	46	68	0.98
2	14	1.4	1.1e+02	4.2	0.0	2	23	93	115	92	115	0.90
3	14	0.00037	0.029	15.4	0.1	1	23	162	184	162	185	0.96
4	14	0.002	0.16	13.1	1.0	3	23	192	213	192	213	0.97
5	14	0.00032	0.025	15.6	1.2	2	23	216	238	216	238	0.97
6	14	1.7	1.3e+02	3.9	3.6	1	23	318	341	318	341	0.93
7	14	9.4	7.3e+02	1.6	0.0	3	22	370	389	368	391	0.85
8	14	0.0084	0.65	11.2	0.1	2	22	416	436	415	438	0.89
9	14	0.00046	0.035	15.2	0.2	2	23	444	466	444	466	0.94
10	14	0.0022	0.17	13.0	1.5	2	23	471	493	470	493	0.94
11	14	0.006	0.46	11.6	0.5	1	23	498	521	498	521	0.96
12	14	1.5e-05	0.0012	19.8	3.9	1	23	525	548	525	548	0.97
13	14	0.0057	0.44	11.7	2.7	2	23	555	576	554	576	0.96
14	14	9.7e-06	0.00075	20.4	0.9	1	23	582	604	582	604	0.98

Sequence Information

Coding Sequence: ATGAGAACCAAGAATGAGTCGTCATTAAGAAACGATCGTACCGCGGACCAGTTTGCTAACGCAGAAAGGCGGAGAGACAACTTGAAAGTAATATTCAATCATACAACCATAATCCCTTTCAAATGGAAGTCGAAGTATGCTTGTTACTACTGCAACGAAATGTATACCGATTACGCAAAGTTTAGAAAGCATACGCGATCCCACGGGCCGTGCACTAGAAAGACCTTAAAACGTTTAAAGACGCACCATGAAGTTAAGTTAGACGTGTCAGAAATTGTGTGCGAGTTGTGCCAAGCAGAGTTCAAGAGCTTCGCCCTCATCGTCGATCATTTGATCAACAGCCACTGTATGGAGTACCATAAGAGCGTTGATATACCGTTTCAGGAATACAGGTTGTGCGATCTTAGATGCATGCTCTGCGAGCAGCAGTTTTGCAACTTTAGAACTTTGGCTGGTCACGTTCACAGCTGCCATTCGGATTTTTACGAGTGCGACGATTGCGAACGACAATTCGCCAAAGCGGCTGATATAGCTTTGCATATACAGACGCATCATGCGGCAAACGCGATTGGTTGCGTACAGTGTAGTAAACAGTTCGCTGATGAAGATAAATTGAAGAGGCACAACCGTCGCGTCCATTCGCGTCAGTGTACACGATGCAGTGTAAAGTTTAAATATGCGGGTAGTCTGAAGAAACATATGGAAAGGGAGCATCCCGATGAAGGTGGCACTAAATGCGGTTATTGCTTGAAAGAATTCCTTTCTGCGGTCGAAATGAAGTGCCATTTATCTAGTTGCGAAATCAAAACCTTCACTCAAGTCGAGTCTAACAATGATAACCCGCTCCCCGTTAAGAGATATAAGAGAAACGCCCTATGTAACCAAATAAGACGAAACATTCAATGTGTTCTAAACATGTCTACCGCAATCCCGTTTAAATTCAAAGGAAAATTCTGTTGCTTTTACTGTTCCCACTGGTTTTCTAACTTCGACGAGCTGATTTTACACACTCAAGCGGAACACCCTGTCTGCGAACTGAAATCGAAAGCGATGCAGACCTGCAAAGGCGAGAAAGCTTGTGTCAAACTGGATATAAATGGTCTCGCTTGCAAAGTCTGCCGCCAGCCTATGTCGGATTTGAACAACTTCGTAGATCATGCCATAGCTGAGCACGCAGCTGACTTTGAAAAGTCCGTGCCTCTCAAAGACTGCTTCGAAGCCTTTCACCTAACTCAAGGCAGGATCCCATGTCCTCAGTGTCATGAGCCGTTCGCGTACTTCGCAACGTTGCTGAAGCATTTAGGCGCGGAGCATAACCACCACAAAGCGGTATGCGCGTACTGTGGTCGAGGCTTCCGAACAACGACAAGCTTAGCCATGCACATATCCAATTCACATACTGGGATGTGTGAATGCGCGGTATGCAATGCGAAATGTAAGAACTCTGCAGCGTTAGCGCGCCACATGGCTCGTTACCACGACGCGAAAGACTTCAAATGCCCTCAATGCCCTGAGCAGTTCGAAACGATTTACAAGAAGCAGAATCATTTGATCAAAGCGCATAACGTTGGGCACAAGTGTGCGTACTGCGGGAAGATGTTTACTAGGAACTCTTTCATGATGAACCATGTGAGACGGACACATTTGAAGGAGCGCACCGTGCCATGTTCGGTCTGCCACGTGAAGTTCTTCGACAGTTATCATATGAGGCTGCATATGGTTAAGCACGAGGGAATGAGGAAGTTCAGATGCGAAGTCTGTGGGAAATCTTTCTTGAGGGTGAGAAATTTGAAATCTCACATGGACACGCATAAAAAGGGATATTTGCAGGAGGTGTGCTAA
Protein Sequence: MRTKNESSLRNDRTADQFANAERRRDNLKVIFNHTTIIPFKWKSKYACYYCNEMYTDYAKFRKHTRSHGPCTRKTLKRLKTHHEVKLDVSEIVCELCQAEFKSFALIVDHLINSHCMEYHKSVDIPFQEYRLCDLRCMLCEQQFCNFRTLAGHVHSCHSDFYECDDCERQFAKAADIALHIQTHHAANAIGCVQCSKQFADEDKLKRHNRRVHSRQCTRCSVKFKYAGSLKKHMEREHPDEGGTKCGYCLKEFLSAVEMKCHLSSCEIKTFTQVESNNDNPLPVKRYKRNALCNQIRRNIQCVLNMSTAIPFKFKGKFCCFYCSHWFSNFDELILHTQAEHPVCELKSKAMQTCKGEKACVKLDINGLACKVCRQPMSDLNNFVDHAIAEHAADFEKSVPLKDCFEAFHLTQGRIPCPQCHEPFAYFATLLKHLGAEHNHHKAVCAYCGRGFRTTTSLAMHISNSHTGMCECAVCNAKCKNSAALARHMARYHDAKDFKCPQCPEQFETIYKKQNHLIKAHNVGHKCAYCGKMFTRNSFMMNHVRRTHLKERTVPCSVCHVKFFDSYHMRLHMVKHEGMRKFRCEVCGKSFLRVRNLKSHMDTHKKGYLQEVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -